RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 ZNF268Q14587 947 aaPredicted RBP7.2□□□□□ -1.26
LMO3-235ENST00000616247 SEPT7Q16181 437 aaKnown RBP7.2□□□□□ -1.26
LMO3-235ENST00000616247 CYP4F22Q6NT55 531 aa7.2□□□□□ -1.26
LMO3-235ENST00000616247 FITM2Q8N6M3 262 aa7.2□□□□□ -1.26
LMO3-235ENST00000616247 C1orf131Q8NDD1 294 aaKnown RBP7.2□□□□□ -1.26
LMO3-235ENST00000616247 TGFBRAP1Q8WUH2 860 aa7.2□□□□□ -1.26
LMO3-235ENST00000616247 L3MBTL3Q96JM7 780 aaPredicted RBP7.2□□□□□ -1.26
LMO3-235ENST00000616247 PNMA5Q96PV4 448 aa7.2□□□□□ -1.26
LMO3-235ENST00000616247 RAB3IPQ96QF0 476 aaPredicted RBP7.2□□□□□ -1.26
LMO3-235ENST00000616247 NAP1L3Q99457 506 aaPredicted RBP7.2□□□□□ -1.26
LMO3-235ENST00000616247 SLC5A4Q9NY91 659 aa7.2□□□□□ -1.26
LMO3-235ENST00000616247 PCDHA12Q9UN75 941 aa7.2□□□□□ -1.26
LMO3-235ENST00000616247 SLC12A4Q9UP95 1085 aa7.2□□□□□ -1.26
LMO3-235ENST00000616247 AFDNP55196 1824 aaKnown RBP7.2□□□□□ -1.26
LMO3-235ENST00000616247 POTEB3A0JP26 581 aa7.2□□□□□ -1.26
LMO3-235ENST00000616247 WDR91A4D1P6 747 aa7.2□□□□□ -1.26
LMO3-235ENST00000616247 POTECB2RU33 542 aa7.2□□□□□ -1.26
LMO3-235ENST00000616247 THAP12O43422 761 aa7.2□□□□□ -1.26
LMO3-235ENST00000616247 AGTP01019 485 aa7.2□□□□□ -1.26
LMO3-235ENST00000616247 AFPP02771 609 aaKnown RBP7.2□□□□□ -1.26
LMO3-235ENST00000616247 IL2RBP14784 551 aa7.2□□□□□ -1.26
LMO3-235ENST00000616247 CNGA2Q16280 664 aa7.2□□□□□ -1.26
LMO3-235ENST00000616247 RASIP1Q5U651 963 aa7.2□□□□□ -1.26
LMO3-235ENST00000616247 POTEBQ6S5H4 581 aa7.2□□□□□ -1.26
LMO3-235ENST00000616247 APBB1IPQ7Z5R6 666 aaPredicted RBP7.2□□□□□ -1.26
LMO3-235ENST00000616247 PIGWQ7Z7B1 504 aa7.2□□□□□ -1.26
LMO3-235ENST00000616247 PHLDB2Q86SQ0 1253 aa7.2□□□□□ -1.26
LMO3-235ENST00000616247 ZC3H18Q86VM9 953 aaKnown RBP7.2□□□□□ -1.26
LMO3-235ENST00000616247 SPIRE2Q8WWL2 714 aa7.2□□□□□ -1.26
LMO3-235ENST00000616247 ATXN2LQ8WWM7 1075 aaKnown RBP7.2□□□□□ -1.26
LMO3-235ENST00000616247 PIGBQ92521 554 aa7.2□□□□□ -1.26
LMO3-235ENST00000616247 TLCD1Q96CP7 247 aa7.2□□□□□ -1.26
LMO3-235ENST00000616247 ACSBG1Q96GR2 724 aa7.2□□□□□ -1.26
LMO3-235ENST00000616247 RMDN2Q96LZ7 410 aa7.2□□□□□ -1.26
LMO3-235ENST00000616247 RPS6KC1Q96S38 1066 aa7.2□□□□□ -1.26
LMO3-235ENST00000616247 TMEM47Q9BQJ4 181 aa7.2□□□□□ -1.26
LMO3-235ENST00000616247 BRIP1Q9BX63 1249 aa7.2□□□□□ -1.26
LMO3-235ENST00000616247 LRRC27Q9C0I9 530 aa7.2□□□□□ -1.26
LMO3-235ENST00000616247 NKX1-2Q9UD57 310 aaPredicted RBP7.2□□□□□ -1.26
LMO3-235ENST00000616247 STK17AQ9UEE5 414 aa7.2□□□□□ -1.26
LMO3-235ENST00000616247 CORO1CQ9ULV4 474 aaPredicted RBP7.2□□□□□ -1.26
LMO3-235ENST00000616247 C4AP0C0L4 1744 aa7.19□□□□□ -1.26
LMO3-235ENST00000616247 C4BP0C0L5 1744 aa7.19□□□□□ -1.26
LMO3-235ENST00000616247 IRF6O14896 467 aa7.19□□□□□ -1.26
LMO3-235ENST00000616247 GCNT3O95395 438 aa7.19□□□□□ -1.26
LMO3-235ENST00000616247 PAEPP09466 180 aa7.19□□□□□ -1.26
LMO3-235ENST00000616247 LINGO3P0C6S8 592 aa7.19□□□□□ -1.26
LMO3-235ENST00000616247 PECAM1P16284 738 aaPredicted RBP7.19□□□□□ -1.26
LMO3-235ENST00000616247 PRPHP41219 470 aa7.19□□□□□ -1.26
LMO3-235ENST00000616247 ABL2P42684 1182 aa7.19□□□□□ -1.26
LMO3-235ENST00000616247 MMP13P45452 471 aa7.19□□□□□ -1.26
LMO3-235ENST00000616247 RPL21P46778 160 aaKnown RBP7.19□□□□□ -1.26
LMO3-235ENST00000616247 CYP4A11Q02928 519 aa7.19□□□□□ -1.26
LMO3-235ENST00000616247 ZBTB16Q05516 673 aa7.19□□□□□ -1.26
LMO3-235ENST00000616247 DNAJC3Q13217 504 aa7.19□□□□□ -1.26
LMO3-235ENST00000616247 BLMHQ13867 455 aa7.19□□□□□ -1.26
LMO3-235ENST00000616247 KYNUQ16719 465 aa7.19□□□□□ -1.26
LMO3-235ENST00000616247 SEL1L2Q5TEA6 688 aa7.19□□□□□ -1.26
LMO3-235ENST00000616247 CCDC137Q6PK04 289 aaKnown RBP7.19□□□□□ -1.26
LMO3-235ENST00000616247 NT5DC3Q86UY8 548 aa7.19□□□□□ -1.26
LMO3-235ENST00000616247 RPUSD2Q8IZ73 545 aaKnown RBP7.19□□□□□ -1.26
LMO3-235ENST00000616247 GBP7Q8N8V2 638 aaPredicted RBP7.19□□□□□ -1.26
LMO3-235ENST00000616247 SH3RF3Q8TEJ3 882 aaPredicted RBP7.19□□□□□ -1.26
LMO3-235ENST00000616247 POP1Q99575 1024 aaKnown RBP7.19□□□□□ -1.26
LMO3-235ENST00000616247 ANAPC4Q9UJX5 808 aa7.19□□□□□ -1.26
LMO3-235ENST00000616247 C2CD2Q9Y426 696 aa7.19□□□□□ -1.26
LMO3-235ENST00000616247 POC1B-GALNT4F8VUJ3 575 aa7.19□□□□□ -1.26
LMO3-235ENST00000616247 PPFIA2O75334 1257 aa7.19□□□□□ -1.26
LMO3-235ENST00000616247 ENTPD5O75356 428 aa7.19□□□□□ -1.26
LMO3-235ENST00000616247 PLA2G4BP0C869 781 aa7.19□□□□□ -1.26
LMO3-235ENST00000616247 STAT3P40763 770 aa7.19□□□□□ -1.26
LMO3-235ENST00000616247 KLC1Q07866 573 aa7.19□□□□□ -1.26
LMO3-235ENST00000616247 RIPK1Q13546 671 aa7.19□□□□□ -1.26
LMO3-235ENST00000616247 RCN2Q14257 317 aa7.19□□□□□ -1.26
LMO3-235ENST00000616247 TMED2Q15363 201 aa7.19□□□□□ -1.26
LMO3-235ENST00000616247 EAPPQ56P03 285 aaPredicted RBP7.19□□□□□ -1.26
LMO3-235ENST00000616247 RNF220Q5VTB9 566 aa7.19□□□□□ -1.26
LMO3-235ENST00000616247 EXOC3L1Q86VI1 746 aa7.19□□□□□ -1.26
LMO3-235ENST00000616247 C1orf54Q8WWF1 131 aa7.19□□□□□ -1.26
LMO3-235ENST00000616247 RPGRQ92834 1020 aaKnown RBP7.19□□□□□ -1.26
LMO3-235ENST00000616247 FAM118BQ9BPY3 351 aa7.19□□□□□ -1.26
LMO3-235ENST00000616247 VCXQ9H320 206 aa7.19□□□□□ -1.26
LMO3-235ENST00000616247 TMEM59LQ9UK28 342 aa7.19□□□□□ -1.26
LMO3-235ENST00000616247 USH1CQ9Y6N9 552 aa7.19□□□□□ -1.26
LMO3-235ENST00000616247 AFF2P51816 1311 aa7.19□□□□□ -1.26
LMO3-235ENST00000616247 ZNF335Q9H4Z2 1342 aaPredicted RBP7.19□□□□□ -1.26
LMO3-235ENST00000616247 hCG_2014768A0A024R1R8 64 aa7.18□□□□□ -1.26
LMO3-235ENST00000616247 DDX3XO00571 662 aaKnown RBP eCLIP7.18□□□□□ -1.26
LMO3-235ENST00000616247 TOM1O60784 492 aa7.18□□□□□ -1.26
LMO3-235ENST00000616247 GNA14O95837 355 aa7.18□□□□□ -1.26
LMO3-235ENST00000616247 MYBP10242 640 aa7.18□□□□□ -1.26
LMO3-235ENST00000616247 CASP4P49662 377 aa7.18□□□□□ -1.26
LMO3-235ENST00000616247 CYP2J2P51589 502 aa7.18□□□□□ -1.26
LMO3-235ENST00000616247 AUHQ13825 339 aaKnown RBP7.18□□□□□ -1.26
LMO3-235ENST00000616247 SEPT2Q15019 361 aa7.18□□□□□ -1.26
LMO3-235ENST00000616247 DIXDC1Q155Q3 683 aa7.18□□□□□ -1.26
LMO3-235ENST00000616247 NSMFQ6X4W1 530 aa7.18□□□□□ -1.26
LMO3-235ENST00000616247 IRF2BP2Q7Z5L9 587 aa7.18□□□□□ -1.26
LMO3-235ENST00000616247 TRIM59Q8IWR1 403 aa7.18□□□□□ -1.26
LMO3-235ENST00000616247 LRRC47Q8N1G4 583 aaKnown RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms