RNA–Protein interactions for RNA: ENST00000601444.2

SSBP4-210, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-210ENST00000601444 TMX1Q9H3N1 280 aa22.36■■□□□ 1.17
SSBP4-210ENST00000601444 ZDHHC9Q9Y397 364 aa22.36■■□□□ 1.17
SSBP4-210ENST00000601444 A0A087WZ62 844 aa22.35■■□□□ 1.17
SSBP4-210ENST00000601444 USO1O60763 962 aaKnown RBP22.35■■□□□ 1.17
SSBP4-210ENST00000601444 MUTP22033 750 aa22.35■■□□□ 1.17
SSBP4-210ENST00000601444 FGFR4P22455 802 aa22.35■■□□□ 1.17
SSBP4-210ENST00000601444 SPECC1Q5M775 1068 aa22.35■■□□□ 1.17
SSBP4-210ENST00000601444 MAEAQ7L5Y9 396 aa22.35■■□□□ 1.17
SSBP4-210ENST00000601444 EXOC8Q8IYI6 725 aa22.35■■□□□ 1.17
SSBP4-210ENST00000601444 LINC01599Q8WXQ3 324 aa22.35■■□□□ 1.17
SSBP4-210ENST00000601444 SCLT1Q96NL6 688 aa22.35■■□□□ 1.17
SSBP4-210ENST00000601444 SLC9A7Q96T83 725 aa22.35■■□□□ 1.17
SSBP4-210ENST00000601444 FDXACB1Q9BRP7 624 aaPredicted RBP22.35■■□□□ 1.17
SSBP4-210ENST00000601444 ERVK-5Q9HDB9 667 aa22.35■■□□□ 1.17
SSBP4-210ENST00000601444 DAXXQ9UER7 740 aaPredicted RBP22.35■■□□□ 1.17
SSBP4-210ENST00000601444 FBXO2Q9UK22 296 aaPredicted RBP22.35■■□□□ 1.17
SSBP4-210ENST00000601444 ST3GAL5Q9UNP4 418 aa22.35■■□□□ 1.17
SSBP4-210ENST00000601444 YBX2Q9Y2T7 364 aaKnown RBP22.35■■□□□ 1.17
SSBP4-210ENST00000601444 STK24Q9Y6E0 443 aa22.35■■□□□ 1.17
SSBP4-210ENST00000601444 ARID2Q68CP9 1835 aa22.35■■□□□ 1.17
SSBP4-210ENST00000601444 ENPP3O14638 875 aa22.34■■□□□ 1.17
SSBP4-210ENST00000601444 DGAT1O75907 488 aa22.34■■□□□ 1.17
SSBP4-210ENST00000601444 PDIA4P13667 645 aaKnown RBP22.34■■□□□ 1.17
SSBP4-210ENST00000601444 EIF4BP23588 611 aaKnown RBP22.34■■□□□ 1.17
SSBP4-210ENST00000601444 LAMTOR4Q0VGL1 99 aa22.34■■□□□ 1.17
SSBP4-210ENST00000601444 GRB10Q13322 594 aa22.34■■□□□ 1.17
SSBP4-210ENST00000601444 FAM117BQ6P1L5 589 aa22.34■■□□□ 1.17
SSBP4-210ENST00000601444 HERC6Q8IVU3 1022 aa22.34■■□□□ 1.17
SSBP4-210ENST00000601444 PHOSPHO2Q8TCD6 241 aa22.34■■□□□ 1.17
SSBP4-210ENST00000601444 NLRP4Q96MN2 994 aa22.34■■□□□ 1.17
SSBP4-210ENST00000601444 CLIC6Q96NY7 704 aa22.34■■□□□ 1.17
SSBP4-210ENST00000601444 CSRNP2Q9H175 543 aa22.34■■□□□ 1.17
SSBP4-210ENST00000601444 BHMT2Q9H2M3 363 aa22.34■■□□□ 1.17
SSBP4-210ENST00000601444 ATP6V0A4Q9HBG4 840 aa22.34■■□□□ 1.17
SSBP4-210ENST00000601444 GPRC5CQ9NQ84 441 aa22.34■■□□□ 1.17
SSBP4-210ENST00000601444 COL4A3BPQ9Y5P4 624 aa22.34■■□□□ 1.17
SSBP4-210ENST00000601444 MGEA5O60502 916 aa22.33■■□□□ 1.17
SSBP4-210ENST00000601444 EFCAB14O75071 495 aa22.33■■□□□ 1.17
SSBP4-210ENST00000601444 SRGAP2CP0DJJ0 459 aa22.33■■□□□ 1.17
SSBP4-210ENST00000601444 DARSP14868 501 aaKnown RBP22.33■■□□□ 1.17
SSBP4-210ENST00000601444 DNAJB2P25686 324 aa22.33■■□□□ 1.17
SSBP4-210ENST00000601444 SLC39A14Q15043 492 aa22.33■■□□□ 1.17
SSBP4-210ENST00000601444 HYIQ5T013 277 aa22.33■■□□□ 1.17
SSBP4-210ENST00000601444 PADI6Q6TGC4 694 aa22.33■■□□□ 1.17
SSBP4-210ENST00000601444 USP49Q70CQ1 688 aa22.33■■□□□ 1.17
SSBP4-210ENST00000601444 Q7L0L9 218 aa22.33■■□□□ 1.17
SSBP4-210ENST00000601444 CABP7Q86V35 215 aa22.33■■□□□ 1.17
SSBP4-210ENST00000601444 MYOCDQ8IZQ8 938 aa22.33■■□□□ 1.17
SSBP4-210ENST00000601444 PSPC1Q8WXF1 523 aaKnown RBP22.33■■□□□ 1.17
SSBP4-210ENST00000601444 AK8Q96MA6 479 aa22.33■■□□□ 1.17
SSBP4-210ENST00000601444 POLD4Q9HCU8 107 aa22.33■■□□□ 1.17
SSBP4-210ENST00000601444 SRPRBQ9Y5M8 271 aaKnown RBP22.33■■□□□ 1.17
SSBP4-210ENST00000601444 PTPRSQ13332 1948 aa22.33■■□□□ 1.16
SSBP4-210ENST00000601444 LOXHD1Q8IVV2 1947 aa22.33■■□□□ 1.16
SSBP4-210ENST00000601444 ARHGEF35A5YM69 484 aa22.32■■□□□ 1.16
SSBP4-210ENST00000601444 GPR182O15218 404 aa22.32■■□□□ 1.16
SSBP4-210ENST00000601444 GAS2O43903 313 aaKnown RBP22.32■■□□□ 1.16
SSBP4-210ENST00000601444 BRD1O95696 1058 aa22.32■■□□□ 1.16
SSBP4-210ENST00000601444 AMHP03971 560 aa22.32■■□□□ 1.16
SSBP4-210ENST00000601444 ARL2P36404 184 aa22.32■■□□□ 1.16
SSBP4-210ENST00000601444 LONP1P36776 959 aaKnown RBP22.32■■□□□ 1.16
SSBP4-210ENST00000601444 NASPP49321 788 aaPredicted RBP22.32■■□□□ 1.16
SSBP4-210ENST00000601444 ASAP3Q8TDY4 903 aa22.32■■□□□ 1.16
SSBP4-210ENST00000601444 LRRC15Q8TF66 581 aa22.32■■□□□ 1.16
SSBP4-210ENST00000601444 TCP11Q8WWU5 503 aa22.32■■□□□ 1.16
SSBP4-210ENST00000601444 ZNF396Q96N95 335 aaPredicted RBP22.32■■□□□ 1.16
SSBP4-210ENST00000601444 IFT122Q9HBG6 1241 aa22.32■■□□□ 1.16
SSBP4-210ENST00000601444 DNM3Q9UQ16 869 aa22.32■■□□□ 1.16
SSBP4-210ENST00000601444 UPP2O95045 317 aa22.31■■□□□ 1.16
SSBP4-210ENST00000601444 EYA4O95677 639 aa22.31■■□□□ 1.16
SSBP4-210ENST00000601444 CDC42EP1Q00587 391 aa22.31■■□□□ 1.16
SSBP4-210ENST00000601444 ZNF410Q86VK4 478 aa22.31■■□□□ 1.16
SSBP4-210ENST00000601444 ZNF710Q8N1W2 664 aa22.31■■□□□ 1.16
SSBP4-210ENST00000601444 LINC00301Q8NCQ3 95 aa22.31■■□□□ 1.16
SSBP4-210ENST00000601444 EPSTI1Q96J88 318 aa22.31■■□□□ 1.16
SSBP4-210ENST00000601444 CHAMP1Q96JM3 812 aa22.31■■□□□ 1.16
SSBP4-210ENST00000601444 GCOM2Q9BZD3 368 aaPredicted RBP22.31■■□□□ 1.16
SSBP4-210ENST00000601444 POLR3FQ9H1D9 316 aaPredicted RBP22.31■■□□□ 1.16
SSBP4-210ENST00000601444 NKX2-4Q9H2Z4 354 aa22.31■■□□□ 1.16
SSBP4-210ENST00000601444 GJB5O95377 273 aa22.3■■□□□ 1.16
SSBP4-210ENST00000601444 CYP11B2P19099 503 aa22.3■■□□□ 1.16
SSBP4-210ENST00000601444 GLRA2P23416 452 aa22.3■■□□□ 1.16
SSBP4-210ENST00000601444 UBA7P41226 1012 aa22.3■■□□□ 1.16
SSBP4-210ENST00000601444 KARSQ15046 597 aaKnown RBP22.3■■□□□ 1.16
SSBP4-210ENST00000601444 STK38Q15208 465 aa22.3■■□□□ 1.16
SSBP4-210ENST00000601444 TMEM119Q4V9L6 283 aa22.3■■□□□ 1.16
SSBP4-210ENST00000601444 FAM102BQ5T8I3 360 aa22.3■■□□□ 1.16
SSBP4-210ENST00000601444 RNF149Q8NC42 400 aa22.3■■□□□ 1.16
SSBP4-210ENST00000601444 TOP1MTQ969P6 601 aa22.3■■□□□ 1.16
SSBP4-210ENST00000601444 TIFAQ96CG3 184 aa22.3■■□□□ 1.16
SSBP4-210ENST00000601444 FAM161BQ96MY7 647 aa22.3■■□□□ 1.16
SSBP4-210ENST00000601444 ZBED2Q9BTP6 218 aa22.3■■□□□ 1.16
SSBP4-210ENST00000601444 TTYH1Q9H313 450 aaPredicted RBP22.3■■□□□ 1.16
SSBP4-210ENST00000601444 MINDY3Q9H8M7 445 aa22.3■■□□□ 1.16
SSBP4-210ENST00000601444 MSRAQ9UJ68 235 aa22.3■■□□□ 1.16
SSBP4-210ENST00000601444 PCDHA11Q9Y5I1 949 aa22.3■■□□□ 1.16
SSBP4-210ENST00000601444 MICAL3Q7RTP6 2002 aa22.3■■□□□ 1.16
SSBP4-210ENST00000601444 LCHNA4D1U4 455 aa22.29■■□□□ 1.16
SSBP4-210ENST00000601444 TLL1O43897 1013 aa22.29■■□□□ 1.16
SSBP4-210ENST00000601444 ARHGEF15O94989 841 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms