RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 CLCN3P51790 818 aa17.63■□□□□ 0.41
CSNK1D-212ENST00000580061 DPYDQ12882 1025 aa17.63■□□□□ 0.41
CSNK1D-212ENST00000580061 PNOCQ13519 176 aa17.63■□□□□ 0.41
CSNK1D-212ENST00000580061 SKOR2Q2VWA4 1001 aaPredicted RBP17.63■□□□□ 0.41
CSNK1D-212ENST00000580061 FAM102BQ5T8I3 360 aa17.63■□□□□ 0.41
CSNK1D-212ENST00000580061 IER5Q5VY09 327 aa17.63■□□□□ 0.41
CSNK1D-212ENST00000580061 TAF2Q6P1X5 1199 aa17.63■□□□□ 0.41
CSNK1D-212ENST00000580061 ANKRD33Q7Z3H0 272 aa17.63■□□□□ 0.41
CSNK1D-212ENST00000580061 SERINC5Q86VE9 423 aa17.63■□□□□ 0.41
CSNK1D-212ENST00000580061 TCP11Q8WWU5 503 aa17.63■□□□□ 0.41
CSNK1D-212ENST00000580061 KIFAP3Q92845 792 aa17.63■□□□□ 0.41
CSNK1D-212ENST00000580061 TRPV6Q9H1D0 765 aa17.63■□□□□ 0.41
CSNK1D-212ENST00000580061 NUP62CLQ9H1M0 184 aa17.63■□□□□ 0.41
CSNK1D-212ENST00000580061 FRMD3A2A2Y4 597 aa17.62■□□□□ 0.41
CSNK1D-212ENST00000580061 TRAK2O60296 914 aa17.62■□□□□ 0.41
CSNK1D-212ENST00000580061 CD4P01730 458 aa17.62■□□□□ 0.41
CSNK1D-212ENST00000580061 DNM2P50570 870 aa17.62■□□□□ 0.41
CSNK1D-212ENST00000580061 PTK7Q13308 1070 aa17.62■□□□□ 0.41
CSNK1D-212ENST00000580061 CAMK4Q16566 473 aa17.62■□□□□ 0.41
CSNK1D-212ENST00000580061 LRRC26Q2I0M4 334 aa17.62■□□□□ 0.41
CSNK1D-212ENST00000580061 TRIM60Q495X7 471 aa17.62■□□□□ 0.41
CSNK1D-212ENST00000580061 KIAA0319LQ8IZA0 1049 aa17.62■□□□□ 0.41
CSNK1D-212ENST00000580061 DNAJB3Q8WWF6 145 aa17.62■□□□□ 0.41
CSNK1D-212ENST00000580061 DRC1Q96MC2 740 aa17.62■□□□□ 0.41
CSNK1D-212ENST00000580061 POLR3FQ9H1D9 316 aaPredicted RBP17.62■□□□□ 0.41
CSNK1D-212ENST00000580061 SUCLA2Q9P2R7 463 aaPredicted RBP17.62■□□□□ 0.41
CSNK1D-212ENST00000580061 NOD1Q9Y239 953 aa17.62■□□□□ 0.41
CSNK1D-212ENST00000580061 SFI1A8K8P3 1242 aa17.61■□□□□ 0.41
CSNK1D-212ENST00000580061 KLRC4O43908 158 aa17.61■□□□□ 0.41
CSNK1D-212ENST00000580061 PQBP1O60828 265 aaKnown RBP17.61■□□□□ 0.41
CSNK1D-212ENST00000580061 ZNF131P52739 623 aa17.61■□□□□ 0.41
CSNK1D-212ENST00000580061 RTP1P59025 263 aa17.61■□□□□ 0.41
CSNK1D-212ENST00000580061 ASIC1P78348 528 aa17.61■□□□□ 0.41
CSNK1D-212ENST00000580061 UNC13DQ70J99 1090 aa17.61■□□□□ 0.41
CSNK1D-212ENST00000580061 RPAINQ86UA6 219 aa17.61■□□□□ 0.41
CSNK1D-212ENST00000580061 PRPF31Q8WWY3 499 aaKnown RBP17.61■□□□□ 0.41
CSNK1D-212ENST00000580061 PSPC1Q8WXF1 523 aaKnown RBP17.61■□□□□ 0.41
CSNK1D-212ENST00000580061 ERCC4Q92889 916 aaPredicted RBP17.61■□□□□ 0.41
CSNK1D-212ENST00000580061 WNT8BQ93098 351 aa17.61■□□□□ 0.41
CSNK1D-212ENST00000580061 TOX2Q96NM4 488 aa17.61■□□□□ 0.41
CSNK1D-212ENST00000580061 MAP7D2Q96T17 732 aa17.61■□□□□ 0.41
CSNK1D-212ENST00000580061 FAM49AQ9H0Q0 323 aaPredicted RBP17.61■□□□□ 0.41
CSNK1D-212ENST00000580061 TMEM63CQ9P1W3 806 aa17.61■□□□□ 0.41
CSNK1D-212ENST00000580061 SIP14410 1827 aa17.61■□□□□ 0.41
CSNK1D-212ENST00000580061 PVALEFA0A1B0GWK0 134 aa17.6■□□□□ 0.41
CSNK1D-212ENST00000580061 TLR3O15455 904 aaKnown RBP17.6■□□□□ 0.41
CSNK1D-212ENST00000580061 TBCAO75347 108 aaKnown RBP17.6■□□□□ 0.41
CSNK1D-212ENST00000580061 FAM13AO94988 1023 aa17.6■□□□□ 0.41
CSNK1D-212ENST00000580061 RPLP2P05387 115 aaKnown RBP17.6■□□□□ 0.41
CSNK1D-212ENST00000580061 IDEP14735 1019 aa17.6■□□□□ 0.41
CSNK1D-212ENST00000580061 GLRA2P23416 452 aa17.6■□□□□ 0.41
CSNK1D-212ENST00000580061 TLE2Q04725 743 aa17.6■□□□□ 0.41
CSNK1D-212ENST00000580061 MXD4Q14582 209 aaPredicted RBP17.6■□□□□ 0.41
CSNK1D-212ENST00000580061 CCDC183Q5T5S1 534 aa17.6■□□□□ 0.41
CSNK1D-212ENST00000580061 CCDC65Q8IXS2 484 aa17.6■□□□□ 0.41
CSNK1D-212ENST00000580061 NME8Q8N427 588 aa17.6■□□□□ 0.41
CSNK1D-212ENST00000580061 SPATA20Q8TB22 786 aa17.6■□□□□ 0.41
CSNK1D-212ENST00000580061 ASAP3Q8TDY4 903 aa17.6■□□□□ 0.41
CSNK1D-212ENST00000580061 DHX38Q92620 1227 aaKnown RBP17.6■□□□□ 0.41
CSNK1D-212ENST00000580061 ZHX3Q9H4I2 956 aa17.6■□□□□ 0.41
CSNK1D-212ENST00000580061 C17orf75Q9HAS0 396 aa17.6■□□□□ 0.41
CSNK1D-212ENST00000580061 PARVGQ9HBI0 331 aa17.6■□□□□ 0.41
CSNK1D-212ENST00000580061 PANK4Q9NVE7 773 aa17.6■□□□□ 0.41
CSNK1D-212ENST00000580061 AKT3Q9Y243 479 aa17.6■□□□□ 0.41
CSNK1D-212ENST00000580061 ATP11BQ9Y2G3 1177 aa17.6■□□□□ 0.41
CSNK1D-212ENST00000580061 COL4A3BPQ9Y5P4 624 aa17.6■□□□□ 0.41
CSNK1D-212ENST00000580061 DCDC2CA8MYV0 355 aa17.59■□□□□ 0.41
CSNK1D-212ENST00000580061 ASAP2O43150 1006 aa17.59■□□□□ 0.41
CSNK1D-212ENST00000580061 VTNP04004 478 aa17.59■□□□□ 0.41
CSNK1D-212ENST00000580061 RPN1P04843 607 aaKnown RBP17.59■□□□□ 0.41
CSNK1D-212ENST00000580061 PLS3P13797 630 aa17.59■□□□□ 0.41
CSNK1D-212ENST00000580061 GAP43P17677 238 aa17.59■□□□□ 0.41
CSNK1D-212ENST00000580061 FAAP100Q0VG06 881 aa17.59■□□□□ 0.41
CSNK1D-212ENST00000580061 LAMTOR4Q0VGL1 99 aa17.59■□□□□ 0.41
CSNK1D-212ENST00000580061 TRIM71Q2Q1W2 868 aaKnown RBP17.59■□□□□ 0.41
CSNK1D-212ENST00000580061 CAVIN1Q6NZI2 390 aaKnown RBP17.59■□□□□ 0.41
CSNK1D-212ENST00000580061 RHPN2Q8IUC4 686 aa17.59■□□□□ 0.41
CSNK1D-212ENST00000580061 KSR1Q8IVT5 923 aa17.59■□□□□ 0.41
CSNK1D-212ENST00000580061 BSNDQ8WZ55 320 aa17.59■□□□□ 0.41
CSNK1D-212ENST00000580061 LARSQ9P2J5 1176 aaKnown RBP17.59■□□□□ 0.41
CSNK1D-212ENST00000580061 PCDHA5Q9Y5H7 936 aa17.59■□□□□ 0.41
CSNK1D-212ENST00000580061 SMC2O95347 1197 aa17.58■□□□□ 0.4
CSNK1D-212ENST00000580061 NAMPTP43490 491 aa17.58■□□□□ 0.4
CSNK1D-212ENST00000580061 SARSP49591 514 aaKnown RBP17.58■□□□□ 0.4
CSNK1D-212ENST00000580061 GPC3P51654 580 aa17.58■□□□□ 0.4
CSNK1D-212ENST00000580061 PEX3P56589 373 aa17.58■□□□□ 0.4
CSNK1D-212ENST00000580061 EHHADHQ08426 723 aa17.58■□□□□ 0.4
CSNK1D-212ENST00000580061 COASYQ13057 564 aa17.58■□□□□ 0.4
CSNK1D-212ENST00000580061 CAPSQ13938 189 aa17.58■□□□□ 0.4
CSNK1D-212ENST00000580061 KCNB1Q14721 858 aa17.58■□□□□ 0.4
CSNK1D-212ENST00000580061 KMT5BQ4FZB7 885 aa17.58■□□□□ 0.4
CSNK1D-212ENST00000580061 NT5DC1Q5TFE4 455 aa17.58■□□□□ 0.4
CSNK1D-212ENST00000580061 RSPH3Q86UC2 560 aa17.58■□□□□ 0.4
CSNK1D-212ENST00000580061 MYCT1Q8N699 235 aa17.58■□□□□ 0.4
CSNK1D-212ENST00000580061 SMARCE1Q969G3 411 aa17.58■□□□□ 0.4
CSNK1D-212ENST00000580061 SYAP1Q96A49 352 aaPredicted RBP17.58■□□□□ 0.4
CSNK1D-212ENST00000580061 IFT74Q96LB3 600 aa17.58■□□□□ 0.4
CSNK1D-212ENST00000580061 GSDMAQ96QA5 445 aa17.58■□□□□ 0.4
CSNK1D-212ENST00000580061 KIAA1468Q9P260 1216 aa17.58■□□□□ 0.4
CSNK1D-212ENST00000580061 SEL1LQ9UBV2 794 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms