RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 C17orf75Q9HAS0 396 aa31.24■■■□□ 2.59
CTDNEP1-210ENST00000574322 ZFYVE28Q9HCC9 887 aa31.24■■■□□ 2.59
CTDNEP1-210ENST00000574322 AKAP3O75969 853 aa31.23■■■□□ 2.59
CTDNEP1-210ENST00000574322 GTF2BQ00403 316 aa31.23■■■□□ 2.59
CTDNEP1-210ENST00000574322 XKR3Q5GH77 459 aa31.23■■■□□ 2.59
CTDNEP1-210ENST00000574322 TMEM206Q9H813 350 aa31.23■■■□□ 2.59
CTDNEP1-210ENST00000574322 AGPAT5Q9NUQ2 364 aa31.23■■■□□ 2.59
CTDNEP1-210ENST00000574322 CGNQ9P2M7 1197 aaKnown RBP31.23■■■□□ 2.59
CTDNEP1-210ENST00000574322 PAXBP1Q9Y5B6 917 aa31.23■■■□□ 2.59
CTDNEP1-210ENST00000574322 ZNFX1Q9P2E3 1918 aaKnown RBP31.22■■■□□ 2.59
CTDNEP1-210ENST00000574322 CA12O43570 354 aa31.22■■■□□ 2.59
CTDNEP1-210ENST00000574322 FARP2O94887 1054 aaPredicted RBP31.22■■■□□ 2.59
CTDNEP1-210ENST00000574322 HNRNPH3P31942 346 aaKnown RBP31.22■■■□□ 2.59
CTDNEP1-210ENST00000574322 NCKAP1LP55160 1127 aa31.22■■■□□ 2.59
CTDNEP1-210ENST00000574322 CDK17Q00537 523 aa31.22■■■□□ 2.59
CTDNEP1-210ENST00000574322 KCNMA1Q12791 1236 aa31.22■■■□□ 2.59
CTDNEP1-210ENST00000574322 MTF1Q14872 753 aa31.22■■■□□ 2.59
CTDNEP1-210ENST00000574322 TSR1Q2NL82 804 aaKnown RBP31.22■■■□□ 2.59
CTDNEP1-210ENST00000574322 ZNF397Q8NF99 534 aaPredicted RBP31.22■■■□□ 2.59
CTDNEP1-210ENST00000574322 GPRC5AQ8NFJ5 357 aa31.22■■■□□ 2.59
CTDNEP1-210ENST00000574322 BORCS6Q96GS4 357 aa31.22■■■□□ 2.59
CTDNEP1-210ENST00000574322 PCMTD1Q96MG8 357 aaPredicted RBP31.22■■■□□ 2.59
CTDNEP1-210ENST00000574322 RNF186Q9NXI6 227 aa31.22■■■□□ 2.59
CTDNEP1-210ENST00000574322 ADGRG1Q9Y653 693 aa31.22■■■□□ 2.59
CTDNEP1-210ENST00000574322 MYH9P35579 1960 aaKnown RBP31.22■■■□□ 2.59
CTDNEP1-210ENST00000574322 K7ENM7 598 aa31.21■■■□□ 2.59
CTDNEP1-210ENST00000574322 DGAT1O75907 488 aa31.21■■■□□ 2.59
CTDNEP1-210ENST00000574322 CCDC175P0C221 793 aa31.21■■■□□ 2.59
CTDNEP1-210ENST00000574322 EPB41P11171 864 aaKnown RBP31.21■■■□□ 2.59
CTDNEP1-210ENST00000574322 RTP1P59025 263 aa31.21■■■□□ 2.59
CTDNEP1-210ENST00000574322 SNRPFP62306 86 aaKnown RBP31.21■■■□□ 2.59
CTDNEP1-210ENST00000574322 CCNA1P78396 465 aa31.21■■■□□ 2.59
CTDNEP1-210ENST00000574322 PRKCEQ02156 737 aa31.21■■■□□ 2.59
CTDNEP1-210ENST00000574322 CRHR2Q13324 411 aa31.21■■■□□ 2.59
CTDNEP1-210ENST00000574322 WDR59Q6PJI9 974 aa31.21■■■□□ 2.59
CTDNEP1-210ENST00000574322 KIFAP3Q92845 792 aa31.21■■■□□ 2.59
CTDNEP1-210ENST00000574322 CEP170P1Q96L14 293 aa31.21■■■□□ 2.59
CTDNEP1-210ENST00000574322 AGPAT3Q9NRZ7 376 aa31.21■■■□□ 2.59
CTDNEP1-210ENST00000574322 TRPA1O75762 1119 aa31.21■■■□□ 2.59
CTDNEP1-210ENST00000574322 PGK2P07205 417 aa31.21■■■□□ 2.59
CTDNEP1-210ENST00000574322 GCLCP48506 637 aaPredicted RBP31.21■■■□□ 2.59
CTDNEP1-210ENST00000574322 MAEAQ7L5Y9 396 aa31.21■■■□□ 2.59
CTDNEP1-210ENST00000574322 C12orf56Q8IXR9 622 aa31.21■■■□□ 2.59
CTDNEP1-210ENST00000574322 NTPCRQ9BSD7 190 aaKnown RBP31.21■■■□□ 2.59
CTDNEP1-210ENST00000574322 MORF4L1Q9UBU8 362 aa31.21■■■□□ 2.59
CTDNEP1-210ENST00000574322 MCPH1Q8NEM0 835 aa31.2■■■□□ 2.58
CTDNEP1-210ENST00000574322 SPIRE2Q8WWL2 714 aa31.2■■■□□ 2.58
CTDNEP1-210ENST00000574322 ACCSQ96QU6 501 aa31.2■■■□□ 2.58
CTDNEP1-210ENST00000574322 SH2D3AQ9BRG2 576 aa31.2■■■□□ 2.58
CTDNEP1-210ENST00000574322 BEGAINQ9BUH8 593 aa31.2■■■□□ 2.58
CTDNEP1-210ENST00000574322 ZNF302Q9NR11 478 aa31.2■■■□□ 2.58
CTDNEP1-210ENST00000574322 CYP26B1Q9NR63 512 aa31.2■■■□□ 2.58
CTDNEP1-210ENST00000574322 CLIC2O15247 247 aa31.19■■■□□ 2.58
CTDNEP1-210ENST00000574322 PSMC2P35998 433 aaKnown RBP31.19■■■□□ 2.58
CTDNEP1-210ENST00000574322 KCNH2Q12809 1159 aa31.19■■■□□ 2.58
CTDNEP1-210ENST00000574322 METTL7BQ6UX53 244 aa31.19■■■□□ 2.58
CTDNEP1-210ENST00000574322 HAUS6Q7Z4H7 955 aa31.19■■■□□ 2.58
CTDNEP1-210ENST00000574322 HVCN1Q96D96 273 aa31.19■■■□□ 2.58
CTDNEP1-210ENST00000574322 PCNTO95613 3336 aa31.19■■■□□ 2.58
CTDNEP1-210ENST00000574322 TLR2O60603 784 aa31.18■■■□□ 2.58
CTDNEP1-210ENST00000574322 SP4Q02446 784 aa31.18■■■□□ 2.58
CTDNEP1-210ENST00000574322 KSR1Q8IVT5 923 aa31.18■■■□□ 2.58
CTDNEP1-210ENST00000574322 PORCNQ9H237 461 aa31.18■■■□□ 2.58
CTDNEP1-210ENST00000574322 MMRN2Q9H8L6 949 aa31.18■■■□□ 2.58
CTDNEP1-210ENST00000574322 PLAGL2Q9UPG8 496 aa31.18■■■□□ 2.58
CTDNEP1-210ENST00000574322 GSTTP1A0A1W2PQM5 241 aa31.18■■■□□ 2.58
CTDNEP1-210ENST00000574322 XRCC5P13010 732 aaKnown RBP31.18■■■□□ 2.58
CTDNEP1-210ENST00000574322 CASP4P49662 377 aa31.18■■■□□ 2.58
CTDNEP1-210ENST00000574322 FAM102BQ5T8I3 360 aa31.18■■■□□ 2.58
CTDNEP1-210ENST00000574322 AFAP1L1Q8TED9 768 aa31.18■■■□□ 2.58
CTDNEP1-210ENST00000574322 GPRC5CQ9NQ84 441 aa31.18■■■□□ 2.58
CTDNEP1-210ENST00000574322 DDX41Q9UJV9 622 aaKnown RBP31.18■■■□□ 2.58
CTDNEP1-210ENST00000574322 EPHB6O15197 1021 aa31.17■■■□□ 2.58
CTDNEP1-210ENST00000574322 TBC1D8O95759 1140 aa31.17■■■□□ 2.58
CTDNEP1-210ENST00000574322 AFPP02771 609 aaKnown RBP31.17■■■□□ 2.58
CTDNEP1-210ENST00000574322 ATP4AP20648 1035 aa31.17■■■□□ 2.58
CTDNEP1-210ENST00000574322 ETF1P62495 437 aaKnown RBP31.17■■■□□ 2.58
CTDNEP1-210ENST00000574322 TRIM65Q6PJ69 517 aa31.17■■■□□ 2.58
CTDNEP1-210ENST00000574322 ABRAQ8N0Z2 381 aa31.17■■■□□ 2.58
CTDNEP1-210ENST00000574322 ANKRD13CQ8N6S4 541 aa31.17■■■□□ 2.58
CTDNEP1-210ENST00000574322 NEK11Q8NG66 645 aa31.17■■■□□ 2.58
CTDNEP1-210ENST00000574322 NIFKQ9BYG3 293 aaKnown RBP31.17■■■□□ 2.58
CTDNEP1-210ENST00000574322 FAM207AQ9NSI2 230 aaPredicted RBP31.17■■■□□ 2.58
CTDNEP1-210ENST00000574322 ZNHIT6Q9NWK9 470 aaKnown RBP31.17■■■□□ 2.58
CTDNEP1-210ENST00000574322 CPA4Q9UI42 421 aa31.17■■■□□ 2.58
CTDNEP1-210ENST00000574322 SMTNP53814 917 aa31.16■■■□□ 2.58
CTDNEP1-210ENST00000574322 PEX3P56589 373 aa31.16■■■□□ 2.58
CTDNEP1-210ENST00000574322 SYCP3Q8IZU3 236 aa31.16■■■□□ 2.58
CTDNEP1-210ENST00000574322 CCDC155Q8N6L0 562 aa31.16■■■□□ 2.58
CTDNEP1-210ENST00000574322 SLC35C1Q96A29 364 aa31.16■■■□□ 2.58
CTDNEP1-210ENST00000574322 CHP1Q99653 195 aa31.16■■■□□ 2.58
CTDNEP1-210ENST00000574322 DESI2Q9BSY9 194 aa31.16■■■□□ 2.58
CTDNEP1-210ENST00000574322 IKZF4Q9H2S9 585 aa31.16■■■□□ 2.58
CTDNEP1-210ENST00000574322 EFCC1Q9HA90 598 aa31.16■■■□□ 2.58
CTDNEP1-210ENST00000574322 SEPT9Q9UHD8 586 aaPredicted RBP31.16■■■□□ 2.58
CTDNEP1-210ENST00000574322 ADGRA2Q96PE1 1338 aa31.16■■■□□ 2.58
CTDNEP1-210ENST00000574322 ASB14A6NK59 587 aa31.15■■■□□ 2.58
CTDNEP1-210ENST00000574322 OATP04181 439 aa31.15■■■□□ 2.58
CTDNEP1-210ENST00000574322 KIF18AQ8NI77 898 aa31.15■■■□□ 2.58
CTDNEP1-210ENST00000574322 BAP1Q92560 729 aa31.15■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms