RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 FERMT2Q96AC1 680 aa7.25□□□□□ -1.25
VPS29-210ENST00000552130 SH3KBP1Q96B97 665 aa7.25□□□□□ -1.25
VPS29-210ENST00000552130 ATG4CQ96DT6 458 aa7.25□□□□□ -1.25
VPS29-210ENST00000552130 SPAG5Q96R06 1193 aa7.25□□□□□ -1.25
VPS29-210ENST00000552130 SLC9A7Q96T83 725 aa7.25□□□□□ -1.25
VPS29-210ENST00000552130 MIPEPQ99797 713 aa7.25□□□□□ -1.25
VPS29-210ENST00000552130 APOL5Q9BWW9 433 aa7.25□□□□□ -1.25
VPS29-210ENST00000552130 WNT10AQ9GZT5 417 aa7.25□□□□□ -1.25
VPS29-210ENST00000552130 DBNDD1Q9H9R9 158 aa7.25□□□□□ -1.25
VPS29-210ENST00000552130 SP110Q9HB58 689 aa7.25□□□□□ -1.25
VPS29-210ENST00000552130 EMC7Q9NPA0 242 aa7.25□□□□□ -1.25
VPS29-210ENST00000552130 GMIPQ9P107 970 aa7.25□□□□□ -1.25
VPS29-210ENST00000552130 IFT80Q9P2H3 777 aaPredicted RBP7.25□□□□□ -1.25
VPS29-210ENST00000552130 INVSQ9Y283 1065 aa7.25□□□□□ -1.25
VPS29-210ENST00000552130 A0A087WV62 115 aa7.24□□□□□ -1.25
VPS29-210ENST00000552130 ANKRD34BA5PLL1 514 aa7.24□□□□□ -1.25
VPS29-210ENST00000552130 KLHL33A6NCF5 533 aa7.24□□□□□ -1.25
VPS29-210ENST00000552130 B4E171 279 aa7.24□□□□□ -1.25
VPS29-210ENST00000552130 ITGAVP06756 1048 aa7.24□□□□□ -1.25
VPS29-210ENST00000552130 ABCB4P21439 1286 aa7.24□□□□□ -1.25
VPS29-210ENST00000552130 GRIA2P42262 883 aa7.24□□□□□ -1.25
VPS29-210ENST00000552130 LINC00310P59036 64 aa7.24□□□□□ -1.25
VPS29-210ENST00000552130 DSG1Q02413 1049 aa7.24□□□□□ -1.25
VPS29-210ENST00000552130 PTPN11Q06124 597 aaPredicted RBP7.24□□□□□ -1.25
VPS29-210ENST00000552130 SMC1AQ14683 1233 aaKnown RBP7.24□□□□□ -1.25
VPS29-210ENST00000552130 PSMD6Q15008 389 aa7.24□□□□□ -1.25
VPS29-210ENST00000552130 TAF12Q16514 161 aa7.24□□□□□ -1.25
VPS29-210ENST00000552130 RALGPS1Q5JS13 557 aa7.24□□□□□ -1.25
VPS29-210ENST00000552130 NLRC3Q7RTR2 1065 aa7.24□□□□□ -1.25
VPS29-210ENST00000552130 OVCH2Q7RTZ1 564 aa7.24□□□□□ -1.25
VPS29-210ENST00000552130 DPP9Q86TI2 863 aa7.24□□□□□ -1.25
VPS29-210ENST00000552130 ZNF227Q86WZ6 799 aa7.24□□□□□ -1.25
VPS29-210ENST00000552130 SLC30A5Q8TAD4 765 aa7.24□□□□□ -1.25
VPS29-210ENST00000552130 DIO2Q92813 273 aa7.24□□□□□ -1.25
VPS29-210ENST00000552130 UBE2FQ969M7 185 aa7.24□□□□□ -1.25
VPS29-210ENST00000552130 CHCHD6Q9BRQ6 235 aa7.24□□□□□ -1.25
VPS29-210ENST00000552130 TTLL2Q9BWV7 592 aa7.24□□□□□ -1.25
VPS29-210ENST00000552130 MRPL9Q9BYD2 267 aaKnown RBP7.24□□□□□ -1.25
VPS29-210ENST00000552130 BRD9Q9H8M2 597 aa7.24□□□□□ -1.25
VPS29-210ENST00000552130 NFKBIL1Q9UBC1 381 aaPredicted RBP7.24□□□□□ -1.25
VPS29-210ENST00000552130 MAFFQ9ULX9 164 aa7.24□□□□□ -1.25
VPS29-210ENST00000552130 TCAF2A6NFQ2 919 aa7.23□□□□□ -1.25
VPS29-210ENST00000552130 TRIM64A6NGJ6 449 aa7.23□□□□□ -1.25
VPS29-210ENST00000552130 TRIM64BA6NI03 449 aa7.23□□□□□ -1.25
VPS29-210ENST00000552130 EIF3FO00303 357 aaPredicted RBP7.23□□□□□ -1.25
VPS29-210ENST00000552130 TNFRSF10CO14798 259 aa7.23□□□□□ -1.25
VPS29-210ENST00000552130 TBC1D8O95759 1140 aa7.23□□□□□ -1.25
VPS29-210ENST00000552130 HOXA5P20719 270 aa7.23□□□□□ -1.25
VPS29-210ENST00000552130 COPAP53621 1224 aa7.23□□□□□ -1.25
VPS29-210ENST00000552130 CTSWP56202 376 aa7.23□□□□□ -1.25
VPS29-210ENST00000552130 SESN3P58005 492 aa7.23□□□□□ -1.25
VPS29-210ENST00000552130 ERVFC1P60507 584 aa7.23□□□□□ -1.25
VPS29-210ENST00000552130 ICA1Q05084 483 aa7.23□□□□□ -1.25
VPS29-210ENST00000552130 TNK2Q07912 1038 aa7.23□□□□□ -1.25
VPS29-210ENST00000552130 PPP2R5CQ13362 524 aa7.23□□□□□ -1.25
VPS29-210ENST00000552130 FKBP15Q5T1M5 1219 aa7.23□□□□□ -1.25
VPS29-210ENST00000552130 CCDC30Q5VVM6 783 aa7.23□□□□□ -1.25
VPS29-210ENST00000552130 LETMD1Q6P1Q0 360 aa7.23□□□□□ -1.25
VPS29-210ENST00000552130 DARS2Q6PI48 645 aaKnown RBP7.23□□□□□ -1.25
VPS29-210ENST00000552130 PCYOX1LQ8NBM8 494 aa7.23□□□□□ -1.25
VPS29-210ENST00000552130 CLRN3Q8NCR9 226 aa7.23□□□□□ -1.25
VPS29-210ENST00000552130 DIS3LQ8TF46 1054 aaKnown RBP7.23□□□□□ -1.25
VPS29-210ENST00000552130 IPCEF1Q8WWN9 437 aaPredicted RBP7.23□□□□□ -1.25
VPS29-210ENST00000552130 PPP1R14AQ96A00 147 aa7.23□□□□□ -1.25
VPS29-210ENST00000552130 KIAA1191Q96A73 305 aa7.23□□□□□ -1.25
VPS29-210ENST00000552130 COX4I2Q96KJ9 171 aa7.23□□□□□ -1.25
VPS29-210ENST00000552130 TEKT5Q96M29 485 aa7.23□□□□□ -1.25
VPS29-210ENST00000552130 FAM167BQ9BTA0 163 aa7.23□□□□□ -1.25
VPS29-210ENST00000552130 CERS4Q9HA82 394 aa7.23□□□□□ -1.25
VPS29-210ENST00000552130 VPS45Q9NRW7 570 aa7.23□□□□□ -1.25
VPS29-210ENST00000552130 SLAMF8Q9P0V8 285 aa7.23□□□□□ -1.25
VPS29-210ENST00000552130 SAMD15Q9P1V8 674 aa7.23□□□□□ -1.25
VPS29-210ENST00000552130 GIMAP2Q9UG22 337 aa7.23□□□□□ -1.25
VPS29-210ENST00000552130 SUSD2Q9UGT4 822 aa7.23□□□□□ -1.25
VPS29-210ENST00000552130 TMEM59LQ9UK28 342 aa7.23□□□□□ -1.25
VPS29-210ENST00000552130 SNCAIPQ9Y6H5 919 aa7.23□□□□□ -1.25
VPS29-210ENST00000552130 PRR36Q9H6K5 1346 aa7.23□□□□□ -1.25
VPS29-210ENST00000552130 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.22□□□□□ -1.25
VPS29-210ENST00000552130 PRAMEF27A3QJZ7 478 aa7.22□□□□□ -1.25
VPS29-210ENST00000552130 CBX4O00257 560 aa7.22□□□□□ -1.25
VPS29-210ENST00000552130 GAS7O60861 476 aa7.22□□□□□ -1.25
VPS29-210ENST00000552130 DHRS4L1P0CG22 281 aa7.22□□□□□ -1.25
VPS29-210ENST00000552130 KIR3DL1P43629 444 aa7.22□□□□□ -1.25
VPS29-210ENST00000552130 PRIM2P49643 509 aa7.22□□□□□ -1.25
VPS29-210ENST00000552130 CLNS1AP54105 237 aaKnown RBP7.22□□□□□ -1.25
VPS29-210ENST00000552130 DCTN1Q14203 1278 aa7.22□□□□□ -1.25
VPS29-210ENST00000552130 ANO4Q32M45 955 aa7.22□□□□□ -1.25
VPS29-210ENST00000552130 TMPRSS7Q7RTY8 843 aa7.22□□□□□ -1.25
VPS29-210ENST00000552130 HDXQ7Z353 690 aa7.22□□□□□ -1.25
VPS29-210ENST00000552130 C7orf31Q8N865 590 aa7.22□□□□□ -1.25
VPS29-210ENST00000552130 CENPIQ92674 756 aaPredicted RBP7.22□□□□□ -1.25
VPS29-210ENST00000552130 PTPRN2Q92932 1015 aa7.22□□□□□ -1.25
VPS29-210ENST00000552130 PLPPR2Q96GM1 343 aa7.22□□□□□ -1.25
VPS29-210ENST00000552130 ZSCAN31Q96LW9 406 aaPredicted RBP7.22□□□□□ -1.25
VPS29-210ENST00000552130 BHMT2Q9H2M3 363 aa7.22□□□□□ -1.25
VPS29-210ENST00000552130 TRIT1Q9H3H1 467 aaKnown RBP7.22□□□□□ -1.25
VPS29-210ENST00000552130 ELAC1Q9H777 363 aaKnown RBP7.22□□□□□ -1.25
VPS29-210ENST00000552130 UBN1Q9NPG3 1134 aa7.22□□□□□ -1.25
VPS29-210ENST00000552130 BLACEA4D250 179 aa7.21□□□□□ -1.26
VPS29-210ENST00000552130 FAM227AF5H4B4 570 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms