RNA–Protein interactions for RNA: ENST00000548259.1

VPS29-204, Transcript of VPS29, retromer complex component, humanhuman

TSL 2

Gene VPS29, Length 563 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-204ENST00000548259 TMEM105Q8N8V8 129 aa19.19■□□□□ 0.66
VPS29-204ENST00000548259 ACSF2Q96CM8 615 aaPredicted RBP19.19■□□□□ 0.66
VPS29-204ENST00000548259 FAM167AQ96KS9 214 aa19.19■□□□□ 0.66
VPS29-204ENST00000548259 SCLT1Q96NL6 688 aa19.19■□□□□ 0.66
VPS29-204ENST00000548259 DACT1Q9NYF0 836 aa19.19■□□□□ 0.66
VPS29-204ENST00000548259 PLXNA4Q9HCM2 1894 aa19.19■□□□□ 0.66
VPS29-204ENST00000548259 SMCO2A6NFE2 343 aa19.18■□□□□ 0.66
VPS29-204ENST00000548259 IPO5O00410 1097 aaKnown RBP19.18■□□□□ 0.66
VPS29-204ENST00000548259 CXCL14O95715 111 aa19.18■□□□□ 0.66
VPS29-204ENST00000548259 EOMESO95936 686 aa19.18■□□□□ 0.66
VPS29-204ENST00000548259 PSAPP07602 524 aa19.18■□□□□ 0.66
VPS29-204ENST00000548259 EIF4BP23588 611 aaKnown RBP19.18■□□□□ 0.66
VPS29-204ENST00000548259 ZNF746Q6NUN9 644 aaPredicted RBP19.18■□□□□ 0.66
VPS29-204ENST00000548259 LRRC55Q6ZSA7 311 aa19.18■□□□□ 0.66
VPS29-204ENST00000548259 SLC39A11Q8N1S5 342 aa19.18■□□□□ 0.66
VPS29-204ENST00000548259 PGBD1Q96JS3 809 aa19.18■□□□□ 0.66
VPS29-204ENST00000548259 ZNF577Q9BSK1 485 aa19.18■□□□□ 0.66
VPS29-204ENST00000548259 SPDYE4A6NLX3 237 aa19.17■□□□□ 0.66
VPS29-204ENST00000548259 ZBTB42B2RXF5 422 aa19.17■□□□□ 0.66
VPS29-204ENST00000548259 CLASP2O75122 1294 aaKnown RBP19.17■□□□□ 0.66
VPS29-204ENST00000548259 PBX3P40426 434 aa19.17■□□□□ 0.66
VPS29-204ENST00000548259 NLRP11P59045 1033 aaKnown RBP19.17■□□□□ 0.66
VPS29-204ENST00000548259 SETQ01105 290 aaPredicted RBP19.17■□□□□ 0.66
VPS29-204ENST00000548259 RARS2Q5T160 578 aaKnown RBP19.17■□□□□ 0.66
VPS29-204ENST00000548259 KIAA1841Q6NSI8 718 aa19.17■□□□□ 0.66
VPS29-204ENST00000548259 RAB11FIP4Q86YS3 637 aa19.17■□□□□ 0.66
VPS29-204ENST00000548259 PCDHA10Q9Y5I2 948 aa19.17■□□□□ 0.66
VPS29-204ENST00000548259 MAFBQ9Y5Q3 323 aaPredicted RBP19.17■□□□□ 0.66
VPS29-204ENST00000548259 RIF1Q5UIP0 2472 aaKnown RBP19.17■□□□□ 0.66
VPS29-204ENST00000548259 A0A0U1RQF3 1178 aa19.16■□□□□ 0.66
VPS29-204ENST00000548259 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.16■□□□□ 0.66
VPS29-204ENST00000548259 EFCAB12Q6NXP0 572 aa19.16■□□□□ 0.66
VPS29-204ENST00000548259 TRMT1LQ7Z2T5 733 aaKnown RBP19.16■□□□□ 0.66
VPS29-204ENST00000548259 SGMS1Q86VZ5 419 aa19.16■□□□□ 0.66
VPS29-204ENST00000548259 PPFIBP1Q86W92 1011 aa19.16■□□□□ 0.66
VPS29-204ENST00000548259 CYP26B1Q9NR63 512 aa19.16■□□□□ 0.66
VPS29-204ENST00000548259 NRBP2Q9NSY0 501 aa19.16■□□□□ 0.66
VPS29-204ENST00000548259 BARHL2Q9NY43 387 aa19.16■□□□□ 0.66
VPS29-204ENST00000548259 STK39Q9UEW8 545 aa19.16■□□□□ 0.66
VPS29-204ENST00000548259 LIMD1Q9UGP4 676 aa19.16■□□□□ 0.66
VPS29-204ENST00000548259 SAMM50Q9Y512 469 aa19.16■□□□□ 0.66
VPS29-204ENST00000548259 SPTBN4Q9H254 2564 aa19.15■□□□□ 0.66
VPS29-204ENST00000548259 ASGR2P07307 311 aa19.15■□□□□ 0.66
VPS29-204ENST00000548259 SKIP12755 728 aa19.15■□□□□ 0.66
VPS29-204ENST00000548259 ID4P47928 161 aa19.15■□□□□ 0.66
VPS29-204ENST00000548259 METAP2P50579 478 aaKnown RBP eCLIP19.15■□□□□ 0.66
VPS29-204ENST00000548259 CLCN3P51790 818 aa19.15■□□□□ 0.66
VPS29-204ENST00000548259 POLGP54098 1239 aaPredicted RBP19.15■□□□□ 0.66
VPS29-204ENST00000548259 CDC42EP1Q00587 391 aa19.15■□□□□ 0.66
VPS29-204ENST00000548259 OTOP3Q7RTS5 596 aa19.15■□□□□ 0.66
VPS29-204ENST00000548259 FRMD5Q7Z6J6 570 aa19.15■□□□□ 0.66
VPS29-204ENST00000548259 CABP7Q86V35 215 aa19.15■□□□□ 0.66
VPS29-204ENST00000548259 VPS52Q8N1B4 723 aa19.15■□□□□ 0.66
VPS29-204ENST00000548259 FLCNQ8NFG4 579 aa19.15■□□□□ 0.66
VPS29-204ENST00000548259 RNF19AQ9NV58 838 aa19.15■□□□□ 0.66
VPS29-204ENST00000548259 V9GY48 417 aaPredicted RBP19.15■□□□□ 0.66
VPS29-204ENST00000548259 FNDC1Q4ZHG4 1894 aaPredicted RBP19.14■□□□□ 0.65
VPS29-204ENST00000548259 ATP4AP20648 1035 aa19.14■□□□□ 0.65
VPS29-204ENST00000548259 BCAR1P56945 870 aa19.14■□□□□ 0.65
VPS29-204ENST00000548259 RTN1Q16799 776 aa19.14■□□□□ 0.65
VPS29-204ENST00000548259 ADSSL1Q8N142 457 aa19.14■□□□□ 0.65
VPS29-204ENST00000548259 EXOC6Q8TAG9 804 aa19.14■□□□□ 0.65
VPS29-204ENST00000548259 HELQQ8TDG4 1101 aa19.14■□□□□ 0.65
VPS29-204ENST00000548259 RTP3Q9BQQ7 232 aa19.14■□□□□ 0.65
VPS29-204ENST00000548259 ADAMTS10Q9H324 1103 aa19.14■□□□□ 0.65
VPS29-204ENST00000548259 GABBR1Q9UBS5 961 aa19.14■□□□□ 0.65
VPS29-204ENST00000548259 CDH22Q9UJ99 828 aa19.14■□□□□ 0.65
VPS29-204ENST00000548259 FBXL21Q9UKT6 434 aa19.14■□□□□ 0.65
VPS29-204ENST00000548259 CNTNAP5Q8WYK1 1306 aa19.14■□□□□ 0.65
VPS29-204ENST00000548259 FAM86B1E9PN63 330 aa19.13■□□□□ 0.65
VPS29-204ENST00000548259 SLC27A2O14975 620 aa19.13■□□□□ 0.65
VPS29-204ENST00000548259 DHX15O43143 795 aaKnown RBP19.13■□□□□ 0.65
VPS29-204ENST00000548259 CYP3A4P08684 503 aa19.13■□□□□ 0.65
VPS29-204ENST00000548259 FAM86B2P0C5J1 330 aa19.13■□□□□ 0.65
VPS29-204ENST00000548259 DARSP14868 501 aaKnown RBP19.13■□□□□ 0.65
VPS29-204ENST00000548259 CLLU1OSQ5K130 101 aa19.13■□□□□ 0.65
VPS29-204ENST00000548259 RNF20Q5VTR2 975 aa19.13■□□□□ 0.65
VPS29-204ENST00000548259 TYW1BQ6NUM6 668 aa19.13■□□□□ 0.65
VPS29-204ENST00000548259 APOA5Q6Q788 366 aa19.13■□□□□ 0.65
VPS29-204ENST00000548259 CCDC149Q6ZUS6 474 aa19.13■□□□□ 0.65
VPS29-204ENST00000548259 CCDC12Q8WUD4 166 aaPredicted RBP19.13■□□□□ 0.65
VPS29-204ENST00000548259 NLRP7Q8WX94 980 aa19.13■□□□□ 0.65
VPS29-204ENST00000548259 LRRC2Q9BYS8 371 aa19.13■□□□□ 0.65
VPS29-204ENST00000548259 CHST12Q9NRB3 414 aa19.13■□□□□ 0.65
VPS29-204ENST00000548259 IRAK3Q9Y616 596 aa19.13■□□□□ 0.65
VPS29-204ENST00000548259 FAM186AA6NE01 2351 aa19.12■□□□□ 0.65
VPS29-204ENST00000548259 WDR64B1ANS9 1081 aa19.12■□□□□ 0.65
VPS29-204ENST00000548259 ZBTB43O43298 467 aa19.12■□□□□ 0.65
VPS29-204ENST00000548259 ZC3H11AO75152 810 aaKnown RBP eCLIP19.12■□□□□ 0.65
VPS29-204ENST00000548259 WEE2P0C1S8 567 aa19.12■□□□□ 0.65
VPS29-204ENST00000548259 CLK2P49760 499 aaKnown RBP19.12■□□□□ 0.65
VPS29-204ENST00000548259 TDGQ13569 410 aa19.12■□□□□ 0.65
VPS29-204ENST00000548259 JAKMIP3Q5VZ66 844 aa19.12■□□□□ 0.65
VPS29-204ENST00000548259 ELMSAN1Q6PJG2 1045 aa19.12■□□□□ 0.65
VPS29-204ENST00000548259 GLB1LQ6UWU2 654 aa19.12■□□□□ 0.65
VPS29-204ENST00000548259 C12orf76Q8N812 135 aaPredicted RBP19.12■□□□□ 0.65
VPS29-204ENST00000548259 EMILIN2Q9BXX0 1053 aa19.12■□□□□ 0.65
VPS29-204ENST00000548259 GCOM2Q9BZD3 368 aaPredicted RBP19.12■□□□□ 0.65
VPS29-204ENST00000548259 ZBP1Q9H171 429 aa19.12■□□□□ 0.65
VPS29-204ENST00000548259 SFXN1Q9H9B4 322 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms