RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 NOC2LQ9Y3T9 749 aaKnown RBP21.3■■□□□ 1
DDX55-211ENST00000544429 TCHHQ07283 1943 aa21.29■■□□□ 1
DDX55-211ENST00000544429 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.29■■□□□ 1
DDX55-211ENST00000544429 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.29■■□□□ 1
DDX55-211ENST00000544429 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.29■■□□□ 1
DDX55-211ENST00000544429 YEATS4O95619 227 aa21.29■■□□□ 1
DDX55-211ENST00000544429 EYA4O95677 639 aa21.29■■□□□ 1
DDX55-211ENST00000544429 DARSP14868 501 aaKnown RBP21.29■■□□□ 1
DDX55-211ENST00000544429 EIF4BP23588 611 aaKnown RBP21.29■■□□□ 1
DDX55-211ENST00000544429 MARCKSP29966 332 aaPredicted RBP21.29■■□□□ 1
DDX55-211ENST00000544429 ARL2P36404 184 aa21.29■■□□□ 1
DDX55-211ENST00000544429 GPR153Q6NV75 609 aa21.29■■□□□ 1
DDX55-211ENST00000544429 FAM228AQ86W67 206 aa21.29■■□□□ 1
DDX55-211ENST00000544429 TCP11Q8WWU5 503 aa21.29■■□□□ 1
DDX55-211ENST00000544429 PSPC1Q8WXF1 523 aaKnown RBP21.29■■□□□ 1
DDX55-211ENST00000544429 TMEM143Q96AN5 459 aa21.29■■□□□ 1
DDX55-211ENST00000544429 SLC9A7Q96T83 725 aa21.29■■□□□ 1
DDX55-211ENST00000544429 CCSER1Q9C0I3 900 aa21.29■■□□□ 1
DDX55-211ENST00000544429 CSRNP2Q9H175 543 aa21.29■■□□□ 1
DDX55-211ENST00000544429 TMX1Q9H3N1 280 aa21.29■■□□□ 1
DDX55-211ENST00000544429 ATP6V0A4Q9HBG4 840 aa21.29■■□□□ 1
DDX55-211ENST00000544429 IFT122Q9HBG6 1241 aa21.29■■□□□ 1
DDX55-211ENST00000544429 TFIP11Q9UBB9 837 aaKnown RBP21.29■■□□□ 1
DDX55-211ENST00000544429 PPP6R2O75170 966 aa21.28■■□□□ 1
DDX55-211ENST00000544429 CYP11B2P19099 503 aa21.28■■□□□ 1
DDX55-211ENST00000544429 DEFB103AP81534 67 aa21.28■■□□□ 1
DDX55-211ENST00000544429 PADI6Q6TGC4 694 aa21.28■■□□□ 1
DDX55-211ENST00000544429 CABP7Q86V35 215 aa21.28■■□□□ 1
DDX55-211ENST00000544429 RHPN2Q8IUC4 686 aa21.28■■□□□ 1
DDX55-211ENST00000544429 KSR1Q8IVT5 923 aa21.28■■□□□ 1
DDX55-211ENST00000544429 LRRC15Q8TF66 581 aa21.28■■□□□ 1
DDX55-211ENST00000544429 LINC01599Q8WXQ3 324 aa21.28■■□□□ 1
DDX55-211ENST00000544429 LRCH3Q96II8 777 aa21.28■■□□□ 1
DDX55-211ENST00000544429 PPP1R16BQ96T49 567 aa21.28■■□□□ 1
DDX55-211ENST00000544429 NT5C3AQ9H0P0 336 aa21.28■■□□□ 1
DDX55-211ENST00000544429 BHMT2Q9H2M3 363 aa21.28■■□□□ 1
DDX55-211ENST00000544429 BMP2KQ9NSY1 1161 aaPredicted RBP21.28■■□□□ 1
DDX55-211ENST00000544429 DNM3Q9UQ16 869 aa21.28■■□□□ 1
DDX55-211ENST00000544429 GINS2Q9Y248 185 aa21.28■■□□□ 1
DDX55-211ENST00000544429 COL4A3BPQ9Y5P4 624 aa21.28■■□□□ 1
DDX55-211ENST00000544429 CDH23Q9H251 3354 aa21.28■■□□□ 1
DDX55-211ENST00000544429 ZBBXA8MT70 800 aa21.27■■□□□ 1
DDX55-211ENST00000544429 GRXCR1A8MXD5 290 aa21.27■■□□□ 1
DDX55-211ENST00000544429 E9PMD0 336 aa21.27■■□□□ 1
DDX55-211ENST00000544429 ASAP2O43150 1006 aa21.27■■□□□ 1
DDX55-211ENST00000544429 USO1O60763 962 aaKnown RBP21.27■■□□□ 1
DDX55-211ENST00000544429 RPS6KA5O75582 802 aa21.27■■□□□ 1
DDX55-211ENST00000544429 ATP2A2P16615 1042 aaKnown RBP21.27■■□□□ 1
DDX55-211ENST00000544429 POU5F1BQ06416 359 aa21.27■■□□□ 1
DDX55-211ENST00000544429 LAMTOR4Q0VGL1 99 aa21.27■■□□□ 1
DDX55-211ENST00000544429 PAK2Q13177 524 aa21.27■■□□□ 1
DDX55-211ENST00000544429 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.27■■□□□ 1
DDX55-211ENST00000544429 USP49Q70CQ1 688 aa21.27■■□□□ 1
DDX55-211ENST00000544429 RTN4RL1Q86UN2 441 aaPredicted RBP21.27■■□□□ 1
DDX55-211ENST00000544429 CRIPAKQ8N1N5 446 aa21.27■■□□□ 1
DDX55-211ENST00000544429 MCPH1Q8NEM0 835 aa21.27■■□□□ 1
DDX55-211ENST00000544429 CLIC6Q96NY7 704 aa21.27■■□□□ 1
DDX55-211ENST00000544429 FTHL17Q9BXU8 183 aa21.27■■□□□ 1
DDX55-211ENST00000544429 ST3GAL5Q9UNP4 418 aa21.27■■□□□ 1
DDX55-211ENST00000544429 CHD9Q3L8U1 2897 aa21.27■■□□□ 1
DDX55-211ENST00000544429 A0A087WZ62 844 aa21.26■□□□□ 0.99
DDX55-211ENST00000544429 ARHGEF35A5YM69 484 aa21.26■□□□□ 0.99
DDX55-211ENST00000544429 GPR182O15218 404 aa21.26■□□□□ 0.99
DDX55-211ENST00000544429 SPTLC2O15270 562 aa21.26■□□□□ 0.99
DDX55-211ENST00000544429 UBA7P41226 1012 aa21.26■□□□□ 0.99
DDX55-211ENST00000544429 MXD4Q14582 209 aaPredicted RBP21.26■□□□□ 0.99
DDX55-211ENST00000544429 IFNLR1Q8IU57 520 aaPredicted RBP21.26■□□□□ 0.99
DDX55-211ENST00000544429 HERC6Q8IVU3 1022 aa21.26■□□□□ 0.99
DDX55-211ENST00000544429 KRI1Q8N9T8 703 aaKnown RBP21.26■□□□□ 0.99
DDX55-211ENST00000544429 ZNF668Q96K58 619 aaPredicted RBP21.26■□□□□ 0.99
DDX55-211ENST00000544429 CCDC43Q96MW1 224 aaKnown RBP21.26■□□□□ 0.99
DDX55-211ENST00000544429 FDXACB1Q9BRP7 624 aaPredicted RBP21.26■□□□□ 0.99
DDX55-211ENST00000544429 TSPYL2Q9H2G4 693 aaPredicted RBP21.26■□□□□ 0.99
DDX55-211ENST00000544429 ENPP3O14638 875 aa21.25■□□□□ 0.99
DDX55-211ENST00000544429 GLRA2P23416 452 aa21.25■□□□□ 0.99
DDX55-211ENST00000544429 KCNJ6P48051 423 aa21.25■□□□□ 0.99
DDX55-211ENST00000544429 SLC12A3P55017 1021 aa21.25■□□□□ 0.99
DDX55-211ENST00000544429 DNM1Q05193 864 aaKnown RBP21.25■□□□□ 0.99
DDX55-211ENST00000544429 DSC3Q14574 896 aa21.25■□□□□ 0.99
DDX55-211ENST00000544429 ODR4Q5SWX8 454 aa21.25■□□□□ 0.99
DDX55-211ENST00000544429 SYT2Q8N9I0 419 aaPredicted RBP21.25■□□□□ 0.99
DDX55-211ENST00000544429 ASAP3Q8TDY4 903 aa21.25■□□□□ 0.99
DDX55-211ENST00000544429 NLRP7Q8WX94 980 aa21.25■□□□□ 0.99
DDX55-211ENST00000544429 EPSTI1Q96J88 318 aa21.25■□□□□ 0.99
DDX55-211ENST00000544429 NFKBIZQ9BYH8 718 aa21.25■□□□□ 0.99
DDX55-211ENST00000544429 PBX4Q9BYU1 374 aa21.25■□□□□ 0.99
DDX55-211ENST00000544429 GCOM2Q9BZD3 368 aaPredicted RBP21.25■□□□□ 0.99
DDX55-211ENST00000544429 COL4A6Q14031 1691 aa21.24■□□□□ 0.99
DDX55-211ENST00000544429 MGEA5O60502 916 aa21.24■□□□□ 0.99
DDX55-211ENST00000544429 GJB5O95377 273 aa21.24■□□□□ 0.99
DDX55-211ENST00000544429 STK38Q15208 465 aa21.24■□□□□ 0.99
DDX55-211ENST00000544429 SPECC1Q5M775 1068 aa21.24■□□□□ 0.99
DDX55-211ENST00000544429 AXDND1Q5T1B0 1012 aaPredicted RBP21.24■□□□□ 0.99
DDX55-211ENST00000544429 C1orf186Q6ZWK4 172 aa21.24■□□□□ 0.99
DDX55-211ENST00000544429 SYMPKQ92797 1274 aaKnown RBP21.24■□□□□ 0.99
DDX55-211ENST00000544429 TOP1MTQ969P6 601 aa21.24■□□□□ 0.99
DDX55-211ENST00000544429 NLRP4Q96MN2 994 aa21.24■□□□□ 0.99
DDX55-211ENST00000544429 GPRC5CQ9NQ84 441 aa21.24■□□□□ 0.99
DDX55-211ENST00000544429 BLOC1S4Q9NUP1 217 aa21.24■□□□□ 0.99
DDX55-211ENST00000544429 RCOR1Q9UKL0 485 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms