RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 MAN2B1O00754 1011 aa1.5□□□□□ -2.17
COPB1-212ENST00000534771 PRODHO43272 600 aa1.5□□□□□ -2.17
COPB1-212ENST00000534771 CLASP2O75122 1294 aaKnown RBP1.5□□□□□ -2.17
COPB1-212ENST00000534771 MPIG6BO95866 241 aa1.5□□□□□ -2.17
COPB1-212ENST00000534771 C4BPAP04003 597 aaKnown RBP1.5□□□□□ -2.17
COPB1-212ENST00000534771 AMY2AP04746 511 aa1.5□□□□□ -2.17
COPB1-212ENST00000534771 SSBP05455 408 aaKnown RBP eCLIP1.5□□□□□ -2.17
COPB1-212ENST00000534771 ATF4P18848 351 aaPredicted RBP1.5□□□□□ -2.17
COPB1-212ENST00000534771 KRT15P19012 456 aa1.5□□□□□ -2.17
COPB1-212ENST00000534771 AMY2BP19961 511 aa1.5□□□□□ -2.17
COPB1-212ENST00000534771 APEX1P27695 318 aaKnown RBP1.5□□□□□ -2.17
COPB1-212ENST00000534771 MC4RP32245 332 aa1.5□□□□□ -2.17
COPB1-212ENST00000534771 RABGGTBP53611 331 aa1.5□□□□□ -2.17
COPB1-212ENST00000534771 ST5P78524 1137 aa1.5□□□□□ -2.17
COPB1-212ENST00000534771 MAP3K12Q12852 859 aa1.5□□□□□ -2.17
COPB1-212ENST00000534771 PAK1Q13153 545 aa1.5□□□□□ -2.17
COPB1-212ENST00000534771 NTRK3Q16288 839 aa1.5□□□□□ -2.17
COPB1-212ENST00000534771 CRY1Q16526 586 aa1.5□□□□□ -2.17
COPB1-212ENST00000534771 ERCC6LQ2NKX8 1250 aa1.5□□□□□ -2.17
COPB1-212ENST00000534771 FKBP15Q5T1M5 1219 aa1.5□□□□□ -2.17
COPB1-212ENST00000534771 MRM1Q6IN84 353 aaKnown RBP1.5□□□□□ -2.17
COPB1-212ENST00000534771 MFSD5Q6N075 450 aa1.5□□□□□ -2.17
COPB1-212ENST00000534771 KLHDC10Q6PID8 442 aa1.5□□□□□ -2.17
COPB1-212ENST00000534771 LRSAM1Q6UWE0 723 aa1.5□□□□□ -2.17
COPB1-212ENST00000534771 LRRC55Q6ZSA7 311 aa1.5□□□□□ -2.17
COPB1-212ENST00000534771 C16orf59Q7L2K0 433 aa1.5□□□□□ -2.17
COPB1-212ENST00000534771 METTL16Q86W50 562 aaKnown RBP1.5□□□□□ -2.17
COPB1-212ENST00000534771 VPS37DQ86XT2 251 aa1.5□□□□□ -2.17
COPB1-212ENST00000534771 PTRH1Q86Y79 214 aaKnown RBP1.5□□□□□ -2.17
COPB1-212ENST00000534771 NT5DC4Q86YG4 428 aa1.5□□□□□ -2.17
COPB1-212ENST00000534771 ZC3H7AQ8IWR0 971 aaKnown RBP1.5□□□□□ -2.17
COPB1-212ENST00000534771 ELOA2Q8IYF1 753 aaPredicted RBP1.5□□□□□ -2.17
COPB1-212ENST00000534771 ANKRD53Q8N9V6 530 aa1.5□□□□□ -2.17
COPB1-212ENST00000534771 CALML6Q8TD86 181 aa1.5□□□□□ -2.17
COPB1-212ENST00000534771 GCDHQ92947 438 aaPredicted RBP1.5□□□□□ -2.17
COPB1-212ENST00000534771 FBXW5Q969U6 566 aa1.5□□□□□ -2.17
COPB1-212ENST00000534771 SLC7A6OSQ96CW6 309 aaPredicted RBP1.5□□□□□ -2.17
COPB1-212ENST00000534771 PGBD4Q96DM1 585 aa1.5□□□□□ -2.17
COPB1-212ENST00000534771 SGSM3Q96HU1 749 aa1.5□□□□□ -2.17
COPB1-212ENST00000534771 FAM193BQ96PV7 902 aaPredicted RBP1.5□□□□□ -2.17
COPB1-212ENST00000534771 GPHA2Q96T91 129 aa1.5□□□□□ -2.17
COPB1-212ENST00000534771 AARSD1Q9BTE6 412 aaKnown RBP1.5□□□□□ -2.17
COPB1-212ENST00000534771 RCAN3Q9UKA8 241 aa1.5□□□□□ -2.17
COPB1-212ENST00000534771 SRPK3Q9UPE1 567 aa1.5□□□□□ -2.17
COPB1-212ENST00000534771 SORCS3Q9UPU3 1222 aa1.5□□□□□ -2.17
COPB1-212ENST00000534771 INSL6Q9Y581 213 aa1.5□□□□□ -2.17
COPB1-212ENST00000534771 RBM8AQ9Y5S9 174 aaKnown RBP1.5□□□□□ -2.17
COPB1-212ENST00000534771 HS3ST4Q9Y661 456 aa1.5□□□□□ -2.17
COPB1-212ENST00000534771 PRAMEF22A3QJZ6 481 aa1.49□□□□□ -2.17
COPB1-212ENST00000534771 BLACEA4D250 179 aa1.49□□□□□ -2.17
COPB1-212ENST00000534771 C2orf78A6NCI8 922 aa1.49□□□□□ -2.17
COPB1-212ENST00000534771 IQCA1LA6NCM1 817 aa1.49□□□□□ -2.17
COPB1-212ENST00000534771 GOLGA6L22H0YM25 854 aa1.49□□□□□ -2.17
COPB1-212ENST00000534771 AQP7O14520 342 aa1.49□□□□□ -2.17
COPB1-212ENST00000534771 WNT9AO14904 365 aa1.49□□□□□ -2.17
COPB1-212ENST00000534771 IPO13O94829 963 aaKnown RBP1.49□□□□□ -2.17
COPB1-212ENST00000534771 SCAF4O95104 1147 aaKnown RBP1.49□□□□□ -2.17
COPB1-212ENST00000534771 GJB6O95452 261 aa1.49□□□□□ -2.17
COPB1-212ENST00000534771 PYGMP11217 842 aa1.49□□□□□ -2.17
COPB1-212ENST00000534771 FGFR1P11362 822 aa1.49□□□□□ -2.17
COPB1-212ENST00000534771 PABPC1P11940 636 aaKnown RBP1.49□□□□□ -2.17
COPB1-212ENST00000534771 NR4A1P22736 598 aa1.49□□□□□ -2.17
COPB1-212ENST00000534771 ZEB1P37275 1124 aaPredicted RBP1.49□□□□□ -2.17
COPB1-212ENST00000534771 AVPR1BP47901 424 aa1.49□□□□□ -2.17
COPB1-212ENST00000534771 ELLP55199 621 aaPredicted RBP1.49□□□□□ -2.17
COPB1-212ENST00000534771 JAM2P57087 298 aa1.49□□□□□ -2.17
COPB1-212ENST00000534771 BPIFB4P59827 614 aa1.49□□□□□ -2.17
COPB1-212ENST00000534771 IFRD2Q12894 506 aaPredicted RBP1.49□□□□□ -2.17
COPB1-212ENST00000534771 SLC10A6Q3KNW5 377 aa1.49□□□□□ -2.17
COPB1-212ENST00000534771 GAGE13Q4V321 117 aa1.49□□□□□ -2.17
COPB1-212ENST00000534771 PLEKHG4Q58EX7 1191 aa1.49□□□□□ -2.17
COPB1-212ENST00000534771 FIGNQ5HY92 759 aa1.49□□□□□ -2.17
COPB1-212ENST00000534771 RUSC1-AS1Q66K80 236 aa1.49□□□□□ -2.17
COPB1-212ENST00000534771 NAIF1Q69YI7 327 aaPredicted RBP1.49□□□□□ -2.17
COPB1-212ENST00000534771 KRT40Q6A162 431 aa1.49□□□□□ -2.17
COPB1-212ENST00000534771 HTR3DQ70Z44 454 aa1.49□□□□□ -2.17
COPB1-212ENST00000534771 BCL6BQ8N143 479 aaPredicted RBP1.49□□□□□ -2.17
COPB1-212ENST00000534771 LCORLQ8N3X6 602 aa1.49□□□□□ -2.17
COPB1-212ENST00000534771 HIPK4Q8NE63 616 aa1.49□□□□□ -2.17
COPB1-212ENST00000534771 MDGA1Q8NFP4 955 aa1.49□□□□□ -2.17
COPB1-212ENST00000534771 CPT1CQ8TCG5 803 aa1.49□□□□□ -2.17
COPB1-212ENST00000534771 CAVIN3Q969G5 261 aa1.49□□□□□ -2.17
COPB1-212ENST00000534771 ARL8AQ96BM9 186 aa1.49□□□□□ -2.17
COPB1-212ENST00000534771 ZNF512Q96ME7 567 aaPredicted RBP1.49□□□□□ -2.17
COPB1-212ENST00000534771 GBP4Q96PP9 640 aa1.49□□□□□ -2.17
COPB1-212ENST00000534771 VPS33BQ9H267 617 aa1.49□□□□□ -2.17
COPB1-212ENST00000534771 R3HDMLQ9H3Y0 253 aa1.49□□□□□ -2.17
COPB1-212ENST00000534771 SAE1Q9UBE0 346 aaPredicted RBP1.49□□□□□ -2.17
COPB1-212ENST00000534771 TESQ9UGI8 421 aaKnown RBP1.49□□□□□ -2.17
COPB1-212ENST00000534771 PRKAG3Q9UGI9 489 aa1.49□□□□□ -2.17
COPB1-212ENST00000534771 SFMBT1Q9UHJ3 866 aa1.49□□□□□ -2.17
COPB1-212ENST00000534771 DENND2AQ9ULE3 1009 aa1.49□□□□□ -2.17
COPB1-212ENST00000534771 INPP5FQ9Y2H2 1132 aa1.49□□□□□ -2.17
COPB1-212ENST00000534771 TRAF6Q9Y4K3 522 aa1.49□□□□□ -2.17
COPB1-212ENST00000534771 ASB1Q9Y576 335 aa1.49□□□□□ -2.17
COPB1-212ENST00000534771 PCDHA8Q9Y5H6 950 aa1.49□□□□□ -2.17
COPB1-212ENST00000534771 COL11A2P13942 1736 aaPredicted RBP1.49□□□□□ -2.17
COPB1-212ENST00000534771 ASXL2Q76L83 1435 aa1.49□□□□□ -2.17
COPB1-212ENST00000534771 CENPVL1A0A0U1RR11 272 aa1.48□□□□□ -2.17
COPB1-212ENST00000534771 GRXCR1A8MXD5 290 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 119.2 ms