RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 CEP72Q9P209 647 aa12.61□□□□□ -0.39
USP35-207ENST00000530546 ASTN1O14525 1302 aa12.61□□□□□ -0.39
USP35-207ENST00000530546 PDXKO00764 312 aa12.6□□□□□ -0.39
USP35-207ENST00000530546 SCP2P22307 547 aa12.6□□□□□ -0.39
USP35-207ENST00000530546 HSD17B4P51659 736 aa12.6□□□□□ -0.39
USP35-207ENST00000530546 ZNF280AP59817 542 aaPredicted RBP12.6□□□□□ -0.39
USP35-207ENST00000530546 FAM133AQ8N9E0 248 aa12.6□□□□□ -0.39
USP35-207ENST00000530546 WNK4Q96J92 1243 aa12.6□□□□□ -0.39
USP35-207ENST00000530546 KIAA1683Q9H0B3 1180 aa12.6□□□□□ -0.39
USP35-207ENST00000530546 PARVGQ9HBI0 331 aa12.6□□□□□ -0.39
USP35-207ENST00000530546 JADE2Q9NQC1 790 aa12.6□□□□□ -0.39
USP35-207ENST00000530546 FAM184BQ9ULE4 1060 aa12.6□□□□□ -0.39
USP35-207ENST00000530546 SAR1BQ9Y6B6 198 aa12.6□□□□□ -0.39
USP35-207ENST00000530546 ZEB2O60315 1214 aa12.6□□□□□ -0.39
USP35-207ENST00000530546 TLR2O60603 784 aa12.6□□□□□ -0.39
USP35-207ENST00000530546 XRCC5P13010 732 aaKnown RBP12.6□□□□□ -0.39
USP35-207ENST00000530546 NAP1L1P55209 391 aaKnown RBP12.6□□□□□ -0.39
USP35-207ENST00000530546 GNGT1P63211 74 aa12.6□□□□□ -0.39
USP35-207ENST00000530546 SKOR1P84550 965 aa12.6□□□□□ -0.39
USP35-207ENST00000530546 CRYMQ14894 314 aa12.6□□□□□ -0.39
USP35-207ENST00000530546 ODR4Q5SWX8 454 aa12.6□□□□□ -0.39
USP35-207ENST00000530546 ILDR2Q71H61 639 aa12.6□□□□□ -0.39
USP35-207ENST00000530546 FAM178BQ8IXR5 827 aa12.6□□□□□ -0.39
USP35-207ENST00000530546 EHBP1Q8NDI1 1231 aa12.6□□□□□ -0.39
USP35-207ENST00000530546 SYTL5Q8TDW5 730 aaPredicted RBP12.6□□□□□ -0.39
USP35-207ENST00000530546 CAPN6Q9Y6Q1 641 aa12.6□□□□□ -0.39
USP35-207ENST00000530546 ZNF185O15231 689 aa12.6□□□□□ -0.39
USP35-207ENST00000530546 CTNND1O60716 968 aaKnown RBP12.6□□□□□ -0.39
USP35-207ENST00000530546 AFPP02771 609 aaKnown RBP12.6□□□□□ -0.39
USP35-207ENST00000530546 EPB41P11171 864 aaKnown RBP12.6□□□□□ -0.39
USP35-207ENST00000530546 GAP43P17677 238 aa12.6□□□□□ -0.39
USP35-207ENST00000530546 RPL13P26373 211 aaKnown RBP12.6□□□□□ -0.39
USP35-207ENST00000530546 CYP2J2P51589 502 aa12.6□□□□□ -0.39
USP35-207ENST00000530546 MARSP56192 900 aaKnown RBP12.6□□□□□ -0.39
USP35-207ENST00000530546 RPS6P62753 249 aaKnown RBP12.6□□□□□ -0.39
USP35-207ENST00000530546 PRKG1Q13976 671 aa12.6□□□□□ -0.39
USP35-207ENST00000530546 R3HDM1Q15032 1099 aaKnown RBP12.6□□□□□ -0.39
USP35-207ENST00000530546 PPP2R5AQ15172 486 aa12.6□□□□□ -0.39
USP35-207ENST00000530546 NBPF20Q3BBV1 942 aa12.6□□□□□ -0.39
USP35-207ENST00000530546 C11orf91Q3C1V1 193 aa12.6□□□□□ -0.39
USP35-207ENST00000530546 SLC9C1Q4G0N8 1177 aa12.6□□□□□ -0.39
USP35-207ENST00000530546 TRAPPC11Q7Z392 1133 aa12.6□□□□□ -0.39
USP35-207ENST00000530546 RIN2Q8WYP3 895 aaPredicted RBP12.6□□□□□ -0.39
USP35-207ENST00000530546 RUBCNQ92622 972 aa12.6□□□□□ -0.39
USP35-207ENST00000530546 LPAR1Q92633 364 aa12.6□□□□□ -0.39
USP35-207ENST00000530546 N4BP2L2Q92802 583 aaPredicted RBP12.6□□□□□ -0.39
USP35-207ENST00000530546 ATG4CQ96DT6 458 aa12.6□□□□□ -0.39
USP35-207ENST00000530546 PSMB7Q99436 277 aa12.6□□□□□ -0.39
USP35-207ENST00000530546 SELENOOQ9BVL4 669 aa12.6□□□□□ -0.39
USP35-207ENST00000530546 SLC38A10Q9HBR0 1119 aa12.6□□□□□ -0.39
USP35-207ENST00000530546 TGFB1I1O43294 461 aa12.59□□□□□ -0.39
USP35-207ENST00000530546 OPA1O60313 960 aa12.59□□□□□ -0.39
USP35-207ENST00000530546 CKAP4Q07065 602 aaKnown RBP12.59□□□□□ -0.39
USP35-207ENST00000530546 HGSNATQ68CP4 663 aa12.59□□□□□ -0.39
USP35-207ENST00000530546 MCF2L2Q86YR7 1114 aa12.59□□□□□ -0.39
USP35-207ENST00000530546 ZC3H3Q8IXZ2 948 aaKnown RBP12.59□□□□□ -0.39
USP35-207ENST00000530546 CAGE1Q8TC20 777 aa12.59□□□□□ -0.39
USP35-207ENST00000530546 FAXDC2Q96IV6 333 aa12.59□□□□□ -0.39
USP35-207ENST00000530546 TMEM150BA6NC51 233 aa12.59□□□□□ -0.39
USP35-207ENST00000530546 BUB1O43683 1085 aa12.59□□□□□ -0.39
USP35-207ENST00000530546 SMTNP53814 917 aa12.59□□□□□ -0.39
USP35-207ENST00000530546 MRPS9P82933 396 aaKnown RBP12.59□□□□□ -0.39
USP35-207ENST00000530546 ITGB3BPQ13352 177 aaPredicted RBP12.59□□□□□ -0.39
USP35-207ENST00000530546 TKFCQ3LXA3 575 aa12.59□□□□□ -0.39
USP35-207ENST00000530546 ANGEL2Q5VTE6 544 aaKnown RBP12.59□□□□□ -0.39
USP35-207ENST00000530546 FRMD5Q7Z6J6 570 aa12.59□□□□□ -0.39
USP35-207ENST00000530546 RDH13Q8NBN7 331 aa12.59□□□□□ -0.39
USP35-207ENST00000530546 WRNIP1Q96S55 665 aa12.59□□□□□ -0.39
USP35-207ENST00000530546 MMS19Q96T76 1030 aa12.59□□□□□ -0.39
USP35-207ENST00000530546 TSGA10Q9BZW7 698 aa12.59□□□□□ -0.39
USP35-207ENST00000530546 MTFR1LQ9H019 292 aa12.59□□□□□ -0.39
USP35-207ENST00000530546 ODF2LQ9ULJ1 636 aa12.59□□□□□ -0.39
USP35-207ENST00000530546 PPP1R9AQ9ULJ8 1098 aa12.59□□□□□ -0.39
USP35-207ENST00000530546 MYO1FO00160 1098 aa12.58□□□□□ -0.4
USP35-207ENST00000530546 ZBED4O75132 1171 aa12.58□□□□□ -0.4
USP35-207ENST00000530546 HIP1RO75146 1068 aa12.58□□□□□ -0.4
USP35-207ENST00000530546 RPS12P25398 132 aaKnown RBP12.58□□□□□ -0.4
USP35-207ENST00000530546 IRX1P78414 480 aaPredicted RBP12.58□□□□□ -0.4
USP35-207ENST00000530546 KLHL30Q0D2K2 578 aa12.58□□□□□ -0.4
USP35-207ENST00000530546 MTMR1Q13613 665 aa12.58□□□□□ -0.4
USP35-207ENST00000530546 ASIC2Q16515 512 aa12.58□□□□□ -0.4
USP35-207ENST00000530546 SPAG5Q96R06 1193 aa12.58□□□□□ -0.4
USP35-207ENST00000530546 EDEM3Q9BZQ6 932 aa12.58□□□□□ -0.4
USP35-207ENST00000530546 GANQ9H2C0 597 aa12.58□□□□□ -0.4
USP35-207ENST00000530546 OLFML3Q9NRN5 406 aa12.58□□□□□ -0.4
USP35-207ENST00000530546 TESPA1A2RU30 521 aaPredicted RBP12.58□□□□□ -0.4
USP35-207ENST00000530546 NDUFAB1O14561 156 aa12.58□□□□□ -0.4
USP35-207ENST00000530546 TACC1O75410 805 aa12.58□□□□□ -0.4
USP35-207ENST00000530546 SERPING1P05155 500 aa12.58□□□□□ -0.4
USP35-207ENST00000530546 DNA2P51530 1060 aa12.58□□□□□ -0.4
USP35-207ENST00000530546 EXOC3L4Q17RC7 722 aa12.58□□□□□ -0.4
USP35-207ENST00000530546 BMT2Q1RMZ1 405 aa12.58□□□□□ -0.4
USP35-207ENST00000530546 GJB7Q6PEY0 223 aa12.58□□□□□ -0.4
USP35-207ENST00000530546 PADI6Q6TGC4 694 aa12.58□□□□□ -0.4
USP35-207ENST00000530546 CCNI2Q6ZMN8 369 aaPredicted RBP12.58□□□□□ -0.4
USP35-207ENST00000530546 SYCP3Q8IZU3 236 aa12.58□□□□□ -0.4
USP35-207ENST00000530546 RIT2Q99578 217 aa12.58□□□□□ -0.4
USP35-207ENST00000530546 AGO4Q9HCK5 861 aaKnown RBP12.58□□□□□ -0.4
USP35-207ENST00000530546 KLC4Q9NSK0 619 aa12.58□□□□□ -0.4
USP35-207ENST00000530546 GGA2Q9UJY4 613 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms