RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 FAM102BQ5T8I3 360 aa6□□□□□ -1.45
HMGB1P40-201ENST00000525121 RASIP1Q5U651 963 aa6□□□□□ -1.45
HMGB1P40-201ENST00000525121 PADI6Q6TGC4 694 aa6□□□□□ -1.45
HMGB1P40-201ENST00000525121 CATSPER4Q7RTX7 472 aa6□□□□□ -1.45
HMGB1P40-201ENST00000525121 HERC6Q8IVU3 1022 aa6□□□□□ -1.45
HMGB1P40-201ENST00000525121 ZBTB8OSQ8IWT0 167 aa6□□□□□ -1.45
HMGB1P40-201ENST00000525121 LINC01465Q8N7H1 131 aa6□□□□□ -1.45
HMGB1P40-201ENST00000525121 KRI1Q8N9T8 703 aaKnown RBP6□□□□□ -1.45
HMGB1P40-201ENST00000525121 RNF149Q8NC42 400 aa6□□□□□ -1.45
HMGB1P40-201ENST00000525121 KCNG4Q8TDN1 519 aa6□□□□□ -1.45
HMGB1P40-201ENST00000525121 KIFAP3Q92845 792 aa6□□□□□ -1.45
HMGB1P40-201ENST00000525121 TMEM143Q96AN5 459 aa6□□□□□ -1.45
HMGB1P40-201ENST00000525121 TIFAQ96CG3 184 aa6□□□□□ -1.45
HMGB1P40-201ENST00000525121 IFT74Q96LB3 600 aa6□□□□□ -1.45
HMGB1P40-201ENST00000525121 DRC1Q96MC2 740 aa6□□□□□ -1.45
HMGB1P40-201ENST00000525121 YME1L1Q96TA2 773 aa6□□□□□ -1.45
HMGB1P40-201ENST00000525121 POLR3FQ9H1D9 316 aaPredicted RBP6□□□□□ -1.45
HMGB1P40-201ENST00000525121 BHMT2Q9H2M3 363 aa6□□□□□ -1.45
HMGB1P40-201ENST00000525121 SLC28A3Q9HAS3 691 aa6□□□□□ -1.45
HMGB1P40-201ENST00000525121 C1orf112Q9NSG2 853 aa6□□□□□ -1.45
HMGB1P40-201ENST00000525121 DACT1Q9NYF0 836 aa6□□□□□ -1.45
HMGB1P40-201ENST00000525121 CXXC1Q9P0U4 656 aaPredicted RBP6□□□□□ -1.45
HMGB1P40-201ENST00000525121 LRFN2Q9ULH4 789 aa6□□□□□ -1.45
HMGB1P40-201ENST00000525121 PADI3Q9ULW8 664 aa6□□□□□ -1.45
HMGB1P40-201ENST00000525121 PCDHA11Q9Y5I1 949 aa6□□□□□ -1.45
HMGB1P40-201ENST00000525121 CLIC4Q9Y696 253 aa6□□□□□ -1.45
HMGB1P40-201ENST00000525121 PHLPP2Q6ZVD8 1323 aa5.99□□□□□ -1.45
HMGB1P40-201ENST00000525121 A0A087WZ62 844 aa5.99□□□□□ -1.45
HMGB1P40-201ENST00000525121 LRRIQ4A6NIV6 560 aa5.99□□□□□ -1.45
HMGB1P40-201ENST00000525121 PP2D1A8MPX8 630 aa5.99□□□□□ -1.45
HMGB1P40-201ENST00000525121 SPTLC2O15270 562 aa5.99□□□□□ -1.45
HMGB1P40-201ENST00000525121 HOXA2O43364 376 aa5.99□□□□□ -1.45
HMGB1P40-201ENST00000525121 GPR32O75388 356 aa5.99□□□□□ -1.45
HMGB1P40-201ENST00000525121 UPP2O95045 317 aa5.99□□□□□ -1.45
HMGB1P40-201ENST00000525121 KRT18P05783 430 aaKnown RBP5.99□□□□□ -1.45
HMGB1P40-201ENST00000525121 SRGAP2CP0DJJ0 459 aa5.99□□□□□ -1.45
HMGB1P40-201ENST00000525121 SKIP12755 728 aa5.99□□□□□ -1.45
HMGB1P40-201ENST00000525121 CYP11B2P19099 503 aa5.99□□□□□ -1.45
HMGB1P40-201ENST00000525121 IBSPP21815 317 aaPredicted RBP5.99□□□□□ -1.45
HMGB1P40-201ENST00000525121 MARCKSP29966 332 aaPredicted RBP5.99□□□□□ -1.45
HMGB1P40-201ENST00000525121 ME1P48163 572 aa5.99□□□□□ -1.45
HMGB1P40-201ENST00000525121 NASPP49321 788 aaPredicted RBP5.99□□□□□ -1.45
HMGB1P40-201ENST00000525121 KRT85P78386 507 aa5.99□□□□□ -1.45
HMGB1P40-201ENST00000525121 NUCB2P80303 420 aa5.99□□□□□ -1.45
HMGB1P40-201ENST00000525121 DEFB103AP81534 67 aa5.99□□□□□ -1.45
HMGB1P40-201ENST00000525121 DRP2Q13474 957 aa5.99□□□□□ -1.45
HMGB1P40-201ENST00000525121 SLC39A14Q15043 492 aa5.99□□□□□ -1.45
HMGB1P40-201ENST00000525121 PCBP1Q15365 356 aaKnown RBP eCLIP5.99□□□□□ -1.45
HMGB1P40-201ENST00000525121 FOXD4L6Q3SYB3 417 aaPredicted RBP5.99□□□□□ -1.45
HMGB1P40-201ENST00000525121 PPP2R2DQ66LE6 453 aa5.99□□□□□ -1.45
HMGB1P40-201ENST00000525121 FAM109BQ6ICB4 259 aaPredicted RBP5.99□□□□□ -1.45
HMGB1P40-201ENST00000525121 FAM117BQ6P1L5 589 aa5.99□□□□□ -1.45
HMGB1P40-201ENST00000525121 FAM173BQ6P4H8 233 aa5.99□□□□□ -1.45
HMGB1P40-201ENST00000525121 FOXD4L3Q6VB84 417 aaPredicted RBP5.99□□□□□ -1.45
HMGB1P40-201ENST00000525121 MAEAQ7L5Y9 396 aa5.99□□□□□ -1.45
HMGB1P40-201ENST00000525121 APBB1IPQ7Z5R6 666 aaPredicted RBP5.99□□□□□ -1.45
HMGB1P40-201ENST00000525121 SRGAP1Q7Z6B7 1085 aa5.99□□□□□ -1.45
HMGB1P40-201ENST00000525121 NPAS4Q8IUM7 802 aa5.99□□□□□ -1.45
HMGB1P40-201ENST00000525121 HACE1Q8IYU2 909 aa5.99□□□□□ -1.45
HMGB1P40-201ENST00000525121 ABI1Q8IZP0 508 aa5.99□□□□□ -1.45
HMGB1P40-201ENST00000525121 ZNF579Q8NAF0 562 aaKnown RBP5.99□□□□□ -1.45
HMGB1P40-201ENST00000525121 DEPTORQ8TB45 409 aa5.99□□□□□ -1.45
HMGB1P40-201ENST00000525121 PRPF31Q8WWY3 499 aaKnown RBP5.99□□□□□ -1.45
HMGB1P40-201ENST00000525121 LRCH3Q96II8 777 aa5.99□□□□□ -1.45
HMGB1P40-201ENST00000525121 ZNF668Q96K58 619 aaPredicted RBP5.99□□□□□ -1.45
HMGB1P40-201ENST00000525121 USP28Q96RU2 1077 aa5.99□□□□□ -1.45
HMGB1P40-201ENST00000525121 RAD9AQ99638 391 aa5.99□□□□□ -1.45
HMGB1P40-201ENST00000525121 ADAM2Q99965 735 aa5.99□□□□□ -1.45
HMGB1P40-201ENST00000525121 FDXACB1Q9BRP7 624 aaPredicted RBP5.99□□□□□ -1.45
HMGB1P40-201ENST00000525121 TIPINQ9BVW5 301 aa5.99□□□□□ -1.45
HMGB1P40-201ENST00000525121 C2orf40Q9H1Z8 148 aa5.99□□□□□ -1.45
HMGB1P40-201ENST00000525121 ADAMTS10Q9H324 1103 aa5.99□□□□□ -1.45
HMGB1P40-201ENST00000525121 AGO3Q9H9G7 860 aaKnown RBP5.99□□□□□ -1.45
HMGB1P40-201ENST00000525121 ERVK-5Q9HDB9 667 aa5.99□□□□□ -1.45
HMGB1P40-201ENST00000525121 KCND2Q9NZV8 630 aa5.99□□□□□ -1.45
HMGB1P40-201ENST00000525121 KCNG1Q9UIX4 513 aa5.99□□□□□ -1.45
HMGB1P40-201ENST00000525121 ST3GAL5Q9UNP4 418 aa5.99□□□□□ -1.45
HMGB1P40-201ENST00000525121 PIN4Q9Y237 131 aaKnown RBP5.99□□□□□ -1.45
HMGB1P40-201ENST00000525121 NOC2LQ9Y3T9 749 aaKnown RBP5.99□□□□□ -1.45
HMGB1P40-201ENST00000525121 INSL6Q9Y581 213 aa5.99□□□□□ -1.45
HMGB1P40-201ENST00000525121 PCDHB7Q9Y5E2 793 aa5.99□□□□□ -1.45
HMGB1P40-201ENST00000525121 SRPRBQ9Y5M8 271 aaKnown RBP5.99□□□□□ -1.45
HMGB1P40-201ENST00000525121 MORC2Q9Y6X9 1032 aaPredicted RBP5.99□□□□□ -1.45
HMGB1P40-201ENST00000525121 GRXCR1A8MXD5 290 aa5.98□□□□□ -1.45
HMGB1P40-201ENST00000525121 E9PMD0 336 aa5.98□□□□□ -1.45
HMGB1P40-201ENST00000525121 H0YCG3 227 aa5.98□□□□□ -1.45
HMGB1P40-201ENST00000525121 INO80B-WBP1J3KQ70 363 aa5.98□□□□□ -1.45
HMGB1P40-201ENST00000525121 SOX1O00570 391 aaPredicted RBP5.98□□□□□ -1.45
HMGB1P40-201ENST00000525121 ZBTB39O15060 712 aa5.98□□□□□ -1.45
HMGB1P40-201ENST00000525121 CUTAO60888 179 aa5.98□□□□□ -1.45
HMGB1P40-201ENST00000525121 PPP6R2O75170 966 aa5.98□□□□□ -1.45
HMGB1P40-201ENST00000525121 TBCAO75347 108 aaKnown RBP5.98□□□□□ -1.45
HMGB1P40-201ENST00000525121 GJB5O95377 273 aa5.98□□□□□ -1.45
HMGB1P40-201ENST00000525121 CA3P07451 260 aa5.98□□□□□ -1.45
HMGB1P40-201ENST00000525121 PLA2G4BP0C869 781 aa5.98□□□□□ -1.45
HMGB1P40-201ENST00000525121 PLCG1P19174 1290 aa5.98□□□□□ -1.45
HMGB1P40-201ENST00000525121 CDC25AP30304 524 aa5.98□□□□□ -1.45
HMGB1P40-201ENST00000525121 STAT6P42226 847 aa5.98□□□□□ -1.45
HMGB1P40-201ENST00000525121 NAMPTP43490 491 aa5.98□□□□□ -1.45
HMGB1P40-201ENST00000525121 SARSP49591 514 aaKnown RBP5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms