RNA–Protein interactions for RNA: ENST00000522117.5

SPIDR-217, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,745 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-217ENST00000522117 PSMD7P51665 324 aa12.97□□□□□ -0.33
SPIDR-217ENST00000522117 APLP1P51693 650 aa12.97□□□□□ -0.33
SPIDR-217ENST00000522117 EMP3P54852 163 aa12.97□□□□□ -0.33
SPIDR-217ENST00000522117 SH3D19Q5HYK7 790 aa12.97□□□□□ -0.33
SPIDR-217ENST00000522117 MIIPQ5JXC2 388 aa12.97□□□□□ -0.33
SPIDR-217ENST00000522117 MARK2Q7KZI7 788 aaKnown RBP12.97□□□□□ -0.33
SPIDR-217ENST00000522117 RIBC1Q8N443 379 aaPredicted RBP12.97□□□□□ -0.33
SPIDR-217ENST00000522117 HAUS1Q96CS2 278 aa12.97□□□□□ -0.33
SPIDR-217ENST00000522117 DNAJC1Q96KC8 554 aaKnown RBP12.97□□□□□ -0.33
SPIDR-217ENST00000522117 ERGIC2Q96RQ1 377 aa12.97□□□□□ -0.33
SPIDR-217ENST00000522117 AP1M1Q9BXS5 423 aa12.97□□□□□ -0.33
SPIDR-217ENST00000522117 SLC26A6Q9BXS9 759 aa12.97□□□□□ -0.33
SPIDR-217ENST00000522117 ASCC2Q9H1I8 757 aaPredicted RBP12.97□□□□□ -0.33
SPIDR-217ENST00000522117 GPCPD1Q9NPB8 672 aa12.97□□□□□ -0.33
SPIDR-217ENST00000522117 PFDN4Q9NQP4 134 aa12.97□□□□□ -0.33
SPIDR-217ENST00000522117 METTL5Q9NRN9 209 aaKnown RBP12.97□□□□□ -0.33
SPIDR-217ENST00000522117 AXIN2Q9Y2T1 843 aa12.97□□□□□ -0.33
SPIDR-217ENST00000522117 ANKRD62A6NC57 917 aa12.97□□□□□ -0.33
SPIDR-217ENST00000522117 CCDC169A6NNP5 214 aa12.97□□□□□ -0.33
SPIDR-217ENST00000522117 CES2O00748 559 aa12.97□□□□□ -0.33
SPIDR-217ENST00000522117 RPN1P04843 607 aaKnown RBP12.97□□□□□ -0.33
SPIDR-217ENST00000522117 T-ENOLP0DO92 83 aa12.97□□□□□ -0.33
SPIDR-217ENST00000522117 PYGMP11217 842 aa12.97□□□□□ -0.33
SPIDR-217ENST00000522117 SERPINB3P29508 390 aa12.97□□□□□ -0.33
SPIDR-217ENST00000522117 HOXA10P31260 410 aaPredicted RBP12.97□□□□□ -0.33
SPIDR-217ENST00000522117 KCNA1Q09470 495 aa12.97□□□□□ -0.33
SPIDR-217ENST00000522117 AP1B1Q10567 949 aa12.97□□□□□ -0.33
SPIDR-217ENST00000522117 ACVR2BQ13705 512 aa12.97□□□□□ -0.33
SPIDR-217ENST00000522117 RCN1Q15293 331 aa12.97□□□□□ -0.33
SPIDR-217ENST00000522117 CCDC6Q16204 474 aa12.97□□□□□ -0.33
SPIDR-217ENST00000522117 KRT28Q7Z3Y7 464 aa12.97□□□□□ -0.33
SPIDR-217ENST00000522117 OXER1Q8TDS5 423 aa12.97□□□□□ -0.33
SPIDR-217ENST00000522117 LRRC59Q96AG4 307 aaKnown RBP12.97□□□□□ -0.33
SPIDR-217ENST00000522117 KIAA1683Q9H0B3 1180 aa12.97□□□□□ -0.33
SPIDR-217ENST00000522117 METTL14Q9HCE5 456 aaKnown RBP12.97□□□□□ -0.33
SPIDR-217ENST00000522117 NKRFO15226 690 aaKnown RBP eCLIP12.97□□□□□ -0.33
SPIDR-217ENST00000522117 RNF113AO15541 343 aaKnown RBP12.97□□□□□ -0.33
SPIDR-217ENST00000522117 ASMTLO95671 621 aa12.97□□□□□ -0.33
SPIDR-217ENST00000522117 FGAP02671 866 aa12.97□□□□□ -0.33
SPIDR-217ENST00000522117 POTEJP0CG39 1038 aa12.97□□□□□ -0.33
SPIDR-217ENST00000522117 NEK3P51956 506 aa12.97□□□□□ -0.33
SPIDR-217ENST00000522117 EIF4A1P60842 406 aaKnown RBP12.97□□□□□ -0.33
SPIDR-217ENST00000522117 UBAP2Q5T6F2 1119 aaKnown RBP12.97□□□□□ -0.33
SPIDR-217ENST00000522117 RFWD3Q6PCD5 774 aa12.97□□□□□ -0.33
SPIDR-217ENST00000522117 RALYLQ86SE5 291 aaKnown RBP12.97□□□□□ -0.33
SPIDR-217ENST00000522117 MICU3Q86XE3 530 aa12.97□□□□□ -0.33
SPIDR-217ENST00000522117 MAP7D3Q8IWC1 876 aa12.97□□□□□ -0.33
SPIDR-217ENST00000522117 DEPTORQ8TB45 409 aa12.97□□□□□ -0.33
SPIDR-217ENST00000522117 OSBP2Q969R2 916 aa12.97□□□□□ -0.33
SPIDR-217ENST00000522117 OLFM3Q96PB7 478 aa12.97□□□□□ -0.33
SPIDR-217ENST00000522117 SIKE1Q9BRV8 207 aa12.97□□□□□ -0.33
SPIDR-217ENST00000522117 KRT82Q9NSB4 513 aa12.97□□□□□ -0.33
SPIDR-217ENST00000522117 AMACRQ9UHK6 382 aa12.97□□□□□ -0.33
SPIDR-217ENST00000522117 FLT4P35916 1363 aa12.96□□□□□ -0.33
SPIDR-217ENST00000522117 RGL2O15211 777 aa12.96□□□□□ -0.33
SPIDR-217ENST00000522117 TTI1O43156 1089 aa12.96□□□□□ -0.33
SPIDR-217ENST00000522117 HARSP12081 509 aaKnown RBP12.96□□□□□ -0.33
SPIDR-217ENST00000522117 HOXC9P31274 260 aa12.96□□□□□ -0.33
SPIDR-217ENST00000522117 GALK1P51570 392 aa12.96□□□□□ -0.33
SPIDR-217ENST00000522117 NAB2Q15742 525 aa12.96□□□□□ -0.33
SPIDR-217ENST00000522117 TMEM259Q4ZIN3 620 aa12.96□□□□□ -0.33
SPIDR-217ENST00000522117 PHLDB3Q6NSJ2 640 aa12.96□□□□□ -0.33
SPIDR-217ENST00000522117 CYB5R4Q7L1T6 521 aa12.96□□□□□ -0.33
SPIDR-217ENST00000522117 SRPK1Q96SB4 655 aaKnown RBP12.96□□□□□ -0.33
SPIDR-217ENST00000522117 PABPC3Q9H361 631 aaKnown RBP12.96□□□□□ -0.33
SPIDR-217ENST00000522117 LUC7LQ9NQ29 371 aaKnown RBP12.96□□□□□ -0.33
SPIDR-217ENST00000522117 KLHL14Q9P2G3 628 aa12.96□□□□□ -0.33
SPIDR-217ENST00000522117 C1orf167Q5SNV9 1468 aa12.96□□□□□ -0.33
SPIDR-217ENST00000522117 PASKQ96RG2 1323 aa12.96□□□□□ -0.34
SPIDR-217ENST00000522117 NPHP3-ACAD11A0A0J9YXS1 232 aa12.96□□□□□ -0.34
SPIDR-217ENST00000522117 FAM205CA6NFA0 338 aa12.96□□□□□ -0.34
SPIDR-217ENST00000522117 LSM1O15116 133 aaKnown RBP12.96□□□□□ -0.34
SPIDR-217ENST00000522117 KRT36O76013 467 aa12.96□□□□□ -0.34
SPIDR-217ENST00000522117 ATF3P18847 181 aa12.96□□□□□ -0.34
SPIDR-217ENST00000522117 MTTPP55157 894 aa12.96□□□□□ -0.34
SPIDR-217ENST00000522117 SLC34A1Q06495 639 aa12.96□□□□□ -0.34
SPIDR-217ENST00000522117 TTI2Q6NXR4 508 aa12.96□□□□□ -0.34
SPIDR-217ENST00000522117 KSR2Q6VAB6 950 aa12.96□□□□□ -0.34
SPIDR-217ENST00000522117 C4orf50Q6ZRC1 276 aa12.96□□□□□ -0.34
SPIDR-217ENST00000522117 NANOGNBQ7Z5D8 188 aa12.96□□□□□ -0.34
SPIDR-217ENST00000522117 MYOCDQ8IZQ8 938 aa12.96□□□□□ -0.34
SPIDR-217ENST00000522117 PDCD7Q8N8D1 485 aaKnown RBP12.96□□□□□ -0.34
SPIDR-217ENST00000522117 MGARPQ8TDB4 240 aa12.96□□□□□ -0.34
SPIDR-217ENST00000522117 ACTRT1Q8TDG2 376 aa12.96□□□□□ -0.34
SPIDR-217ENST00000522117 DIS3LQ8TF46 1054 aaKnown RBP12.96□□□□□ -0.34
SPIDR-217ENST00000522117 CTNNBL1Q8WYA6 563 aaPredicted RBP12.96□□□□□ -0.34
SPIDR-217ENST00000522117 VTI1AQ96AJ9 217 aa12.96□□□□□ -0.34
SPIDR-217ENST00000522117 TRIM47Q96LD4 638 aa12.96□□□□□ -0.34
SPIDR-217ENST00000522117 FMO2Q99518 471 aa12.96□□□□□ -0.34
SPIDR-217ENST00000522117 TLE6Q9H808 572 aa12.96□□□□□ -0.34
SPIDR-217ENST00000522117 CABP5Q9NP86 173 aa12.96□□□□□ -0.34
SPIDR-217ENST00000522117 IL1RAPL1Q9NZN1 696 aa12.96□□□□□ -0.34
SPIDR-217ENST00000522117 KIAA1522Q9P206 1035 aaPredicted RBP12.96□□□□□ -0.34
SPIDR-217ENST00000522117 DISP2A7MBM2 1401 aa12.95□□□□□ -0.34
SPIDR-217ENST00000522117 RBAK-RBAKDNI3L0D1 243 aa12.95□□□□□ -0.34
SPIDR-217ENST00000522117 KCNK3O14649 394 aa12.95□□□□□ -0.34
SPIDR-217ENST00000522117 EYA4O95677 639 aa12.95□□□□□ -0.34
SPIDR-217ENST00000522117 ZBTB48P10074 688 aaPredicted RBP12.95□□□□□ -0.34
SPIDR-217ENST00000522117 ITGA4P13612 1032 aa12.95□□□□□ -0.34
SPIDR-217ENST00000522117 COPB2P35606 906 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms