RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 AK5Q9Y6K8 562 aa7.82□□□□□ -1.16
LIMCH1-207ENST00000508466 FAM205AQ6ZU69 1335 aa7.82□□□□□ -1.16
LIMCH1-207ENST00000508466 LSM1O15116 133 aaKnown RBP7.82□□□□□ -1.16
LIMCH1-207ENST00000508466 TOM1O60784 492 aa7.82□□□□□ -1.16
LIMCH1-207ENST00000508466 PAEPP09466 180 aa7.82□□□□□ -1.16
LIMCH1-207ENST00000508466 T-ENOLP0DO92 83 aa7.82□□□□□ -1.16
LIMCH1-207ENST00000508466 DESP17661 470 aa7.82□□□□□ -1.16
LIMCH1-207ENST00000508466 AMPD1P23109 780 aa7.82□□□□□ -1.16
LIMCH1-207ENST00000508466 TNFRSF8P28908 595 aa7.82□□□□□ -1.16
LIMCH1-207ENST00000508466 MARCKSL1P49006 195 aa7.82□□□□□ -1.16
LIMCH1-207ENST00000508466 TMEM266Q2M3C6 531 aa7.82□□□□□ -1.16
LIMCH1-207ENST00000508466 METTL24Q5JXM2 366 aa7.82□□□□□ -1.16
LIMCH1-207ENST00000508466 C4orf33Q8N1A6 199 aa7.82□□□□□ -1.16
LIMCH1-207ENST00000508466 SCFD2Q8WU76 684 aa7.82□□□□□ -1.16
LIMCH1-207ENST00000508466 FAM136AQ96C01 138 aa7.82□□□□□ -1.16
LIMCH1-207ENST00000508466 KLF6Q99612 283 aaPredicted RBP7.82□□□□□ -1.16
LIMCH1-207ENST00000508466 NSRP1Q9H0G5 558 aaKnown RBP7.82□□□□□ -1.16
LIMCH1-207ENST00000508466 RXFP1Q9HBX9 757 aa7.82□□□□□ -1.16
LIMCH1-207ENST00000508466 VAT1LQ9HCJ6 419 aa7.82□□□□□ -1.16
LIMCH1-207ENST00000508466 UBN1Q9NPG3 1134 aa7.82□□□□□ -1.16
LIMCH1-207ENST00000508466 DISC1Q9NRI5 854 aa7.82□□□□□ -1.16
LIMCH1-207ENST00000508466 ATXN10Q9UBB4 475 aa7.82□□□□□ -1.16
LIMCH1-207ENST00000508466 ANAPC4Q9UJX5 808 aa7.82□□□□□ -1.16
LIMCH1-207ENST00000508466 DAAM1Q9Y4D1 1078 aa7.82□□□□□ -1.16
LIMCH1-207ENST00000508466 HEY1Q9Y5J3 304 aa7.82□□□□□ -1.16
LIMCH1-207ENST00000508466 N4BP2Q86UW6 1770 aaPredicted RBP7.82□□□□□ -1.16
LIMCH1-207ENST00000508466 OVOS2A0A0G2JMS6 1433 aa7.81□□□□□ -1.16
LIMCH1-207ENST00000508466 TRIM43BA6NCK2 446 aa7.81□□□□□ -1.16
LIMCH1-207ENST00000508466 ATMINO43313 823 aaPredicted RBP7.81□□□□□ -1.16
LIMCH1-207ENST00000508466 CETPP11597 493 aa7.81□□□□□ -1.16
LIMCH1-207ENST00000508466 EEF2P13639 858 aaKnown RBP7.81□□□□□ -1.16
LIMCH1-207ENST00000508466 PSMC4P43686 418 aa7.81□□□□□ -1.16
LIMCH1-207ENST00000508466 RPL21P46778 160 aaKnown RBP7.81□□□□□ -1.16
LIMCH1-207ENST00000508466 CUL1Q13616 776 aa7.81□□□□□ -1.16
LIMCH1-207ENST00000508466 PDE1CQ14123 709 aaPredicted RBP7.81□□□□□ -1.16
LIMCH1-207ENST00000508466 TXNRD1Q16881 649 aa7.81□□□□□ -1.16
LIMCH1-207ENST00000508466 LETM2Q2VYF4 491 aa7.81□□□□□ -1.16
LIMCH1-207ENST00000508466 ZNF365Q70YC5 407 aa7.81□□□□□ -1.16
LIMCH1-207ENST00000508466 ZNF572Q7Z3I7 529 aaPredicted RBP7.81□□□□□ -1.16
LIMCH1-207ENST00000508466 ZNF571Q7Z3V5 609 aaPredicted RBP7.81□□□□□ -1.16
LIMCH1-207ENST00000508466 RBM12BQ8IXT5 1001 aaKnown RBP7.81□□□□□ -1.16
LIMCH1-207ENST00000508466 FBXO27Q8NI29 283 aa7.81□□□□□ -1.16
LIMCH1-207ENST00000508466 WASF1Q92558 559 aa7.81□□□□□ -1.16
LIMCH1-207ENST00000508466 ELMO3Q96BJ8 720 aa7.81□□□□□ -1.16
LIMCH1-207ENST00000508466 LRRC37BQ96QE4 947 aa7.81□□□□□ -1.16
LIMCH1-207ENST00000508466 MIPEPQ99797 713 aa7.81□□□□□ -1.16
LIMCH1-207ENST00000508466 SIKE1Q9BRV8 207 aa7.81□□□□□ -1.16
LIMCH1-207ENST00000508466 CNOT10Q9H9A5 744 aaKnown RBP7.81□□□□□ -1.16
LIMCH1-207ENST00000508466 NPHS2Q9NP85 383 aa7.81□□□□□ -1.16
LIMCH1-207ENST00000508466 PFDN4Q9NQP4 134 aa7.81□□□□□ -1.16
LIMCH1-207ENST00000508466 TMA7Q9Y2S6 64 aaKnown RBP7.81□□□□□ -1.16
LIMCH1-207ENST00000508466 EFCAB6Q5THR3 1501 aa7.81□□□□□ -1.16
LIMCH1-207ENST00000508466 TNKSO95271 1327 aa7.81□□□□□ -1.16
LIMCH1-207ENST00000508466 WDR17Q8IZU2 1322 aa7.81□□□□□ -1.16
LIMCH1-207ENST00000508466 RPTORQ8N122 1335 aa7.81□□□□□ -1.16
LIMCH1-207ENST00000508466 A0A0G2JND7 137 aa7.81□□□□□ -1.16
LIMCH1-207ENST00000508466 RNASEH1O60930 286 aaKnown RBP7.81□□□□□ -1.16
LIMCH1-207ENST00000508466 FGFR1OPO95684 399 aaKnown RBP7.81□□□□□ -1.16
LIMCH1-207ENST00000508466 PCCAP05165 728 aaPredicted RBP7.81□□□□□ -1.16
LIMCH1-207ENST00000508466 LYNP07948 512 aa7.81□□□□□ -1.16
LIMCH1-207ENST00000508466 PDE6AP16499 860 aa7.81□□□□□ -1.16
LIMCH1-207ENST00000508466 CYP11B2P19099 503 aa7.81□□□□□ -1.16
LIMCH1-207ENST00000508466 COG7P83436 770 aa7.81□□□□□ -1.16
LIMCH1-207ENST00000508466 ITIH3Q06033 890 aa7.81□□□□□ -1.16
LIMCH1-207ENST00000508466 CCDC15Q0P6D6 951 aa7.81□□□□□ -1.16
LIMCH1-207ENST00000508466 SLMAPQ14BN4 828 aa7.81□□□□□ -1.16
LIMCH1-207ENST00000508466 WDR72Q3MJ13 1102 aa7.81□□□□□ -1.16
LIMCH1-207ENST00000508466 C6orf183Q5T699 404 aa7.81□□□□□ -1.16
LIMCH1-207ENST00000508466 CYP4F22Q6NT55 531 aa7.81□□□□□ -1.16
LIMCH1-207ENST00000508466 OLFML1Q6UWY5 402 aa7.81□□□□□ -1.16
LIMCH1-207ENST00000508466 IZUMO2Q6UXV1 221 aa7.81□□□□□ -1.16
LIMCH1-207ENST00000508466 DTHD1Q6ZMT9 781 aa7.81□□□□□ -1.16
LIMCH1-207ENST00000508466 SDCCAG8Q86SQ7 713 aaPredicted RBP7.81□□□□□ -1.16
LIMCH1-207ENST00000508466 MAP7D3Q8IWC1 876 aa7.81□□□□□ -1.16
LIMCH1-207ENST00000508466 SCUBE1Q8IWY4 988 aa7.81□□□□□ -1.16
LIMCH1-207ENST00000508466 LCORLQ8N3X6 602 aa7.81□□□□□ -1.16
LIMCH1-207ENST00000508466 SLC7A6OSQ96CW6 309 aaPredicted RBP7.81□□□□□ -1.16
LIMCH1-207ENST00000508466 SPATA16Q9BXB7 569 aa7.81□□□□□ -1.16
LIMCH1-207ENST00000508466 PABPC3Q9H361 631 aaKnown RBP7.81□□□□□ -1.16
LIMCH1-207ENST00000508466 BCAS3Q9H6U6 928 aa7.81□□□□□ -1.16
LIMCH1-207ENST00000508466 RMND1Q9NWS8 449 aa7.81□□□□□ -1.16
LIMCH1-207ENST00000508466 PCDHGB4Q9UN71 923 aa7.81□□□□□ -1.16
LIMCH1-207ENST00000508466 PCDHGB5Q9Y5G0 923 aa7.81□□□□□ -1.16
LIMCH1-207ENST00000508466 CCDC169A6NNP5 214 aa7.8□□□□□ -1.16
LIMCH1-207ENST00000508466 NBPF26B4DH59 902 aa7.8□□□□□ -1.16
LIMCH1-207ENST00000508466 GOLGA8RI6L899 631 aa7.8□□□□□ -1.16
LIMCH1-207ENST00000508466 NOL4O94818 638 aa7.8□□□□□ -1.16
LIMCH1-207ENST00000508466 GOLGA8HP0CJ92 632 aa7.8□□□□□ -1.16
LIMCH1-207ENST00000508466 ALOX15P16050 662 aaPredicted RBP7.8□□□□□ -1.16
LIMCH1-207ENST00000508466 CCNE1P24864 410 aa7.8□□□□□ -1.16
LIMCH1-207ENST00000508466 TXKP42681 527 aa7.8□□□□□ -1.16
LIMCH1-207ENST00000508466 ASTE1Q2TB18 679 aaPredicted RBP7.8□□□□□ -1.16
LIMCH1-207ENST00000508466 TMCO4Q5TGY1 634 aa7.8□□□□□ -1.16
LIMCH1-207ENST00000508466 VSTM1Q6UX27 236 aa7.8□□□□□ -1.16
LIMCH1-207ENST00000508466 SPATA24Q86W54 205 aa7.8□□□□□ -1.16
LIMCH1-207ENST00000508466 GIMAP8Q8ND71 665 aaPredicted RBP7.8□□□□□ -1.16
LIMCH1-207ENST00000508466 TBC1D16Q8TBP0 767 aa7.8□□□□□ -1.16
LIMCH1-207ENST00000508466 P3H4Q92791 437 aa7.8□□□□□ -1.16
LIMCH1-207ENST00000508466 BTBD6Q96KE9 485 aa7.8□□□□□ -1.16
LIMCH1-207ENST00000508466 C9orf72Q96LT7 481 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms