RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 NAP1L2Q9ULW6 460 aaPredicted RBP16.15■□□□□ 0.18
VARS-228ENST00000495010 PCDHA10Q9Y5I2 948 aa16.15■□□□□ 0.18
VARS-228ENST00000495010 MAFBQ9Y5Q3 323 aaPredicted RBP16.15■□□□□ 0.18
VARS-228ENST00000495010 GOLGA8AA7E2F4 631 aa16.14■□□□□ 0.17
VARS-228ENST00000495010 GOLGA8BA8MQT2 603 aa16.14■□□□□ 0.17
VARS-228ENST00000495010 DHX15O43143 795 aaKnown RBP16.14■□□□□ 0.17
VARS-228ENST00000495010 CYP3A4P08684 503 aa16.14■□□□□ 0.17
VARS-228ENST00000495010 CLK2P49760 499 aaKnown RBP16.14■□□□□ 0.17
VARS-228ENST00000495010 NECTIN1Q15223 517 aa16.14■□□□□ 0.17
VARS-228ENST00000495010 MCTP2Q6DN12 878 aa16.14■□□□□ 0.17
VARS-228ENST00000495010 ECHDC2Q86YB7 292 aa16.14■□□□□ 0.17
VARS-228ENST00000495010 ESYT1Q9BSJ8 1104 aa16.14■□□□□ 0.17
VARS-228ENST00000495010 ADAM7Q9H2U9 754 aa16.14■□□□□ 0.17
VARS-228ENST00000495010 NRBP2Q9NSY0 501 aa16.14■□□□□ 0.17
VARS-228ENST00000495010 GABBR1Q9UBS5 961 aa16.14■□□□□ 0.17
VARS-228ENST00000495010 HCFC2Q9Y5Z7 792 aa16.14■□□□□ 0.17
VARS-228ENST00000495010 WDFY4Q6ZS81 3184 aa16.14■□□□□ 0.17
VARS-228ENST00000495010 GALR2O43603 387 aaPredicted RBP16.13■□□□□ 0.17
VARS-228ENST00000495010 PDGFBP01127 241 aaPredicted RBP16.13■□□□□ 0.17
VARS-228ENST00000495010 EIF4BP23588 611 aaKnown RBP16.13■□□□□ 0.17
VARS-228ENST00000495010 MTHFRP42898 656 aa16.13■□□□□ 0.17
VARS-228ENST00000495010 ALDH7A1P49419 539 aaKnown RBP16.13■□□□□ 0.17
VARS-228ENST00000495010 MRPL43Q8N983 215 aaKnown RBP16.13■□□□□ 0.17
VARS-228ENST00000495010 MRPL9Q9BYD2 267 aaKnown RBP16.13■□□□□ 0.17
VARS-228ENST00000495010 MFSD1Q9H3U5 465 aa16.13■□□□□ 0.17
VARS-228ENST00000495010 POMKQ9H5K3 350 aa16.13■□□□□ 0.17
VARS-228ENST00000495010 C6orf50Q9HD87 102 aa16.13■□□□□ 0.17
VARS-228ENST00000495010 ZDBF2Q9HCK1 2354 aa16.12■□□□□ 0.17
VARS-228ENST00000495010 IGLV3-22A0A075B6J6 115 aa16.12■□□□□ 0.17
VARS-228ENST00000495010 C2orf71A6NGG8 1288 aa16.12■□□□□ 0.17
VARS-228ENST00000495010 C2CD4DB7Z1M9 353 aa16.12■□□□□ 0.17
VARS-228ENST00000495010 CLASP2O75122 1294 aaKnown RBP16.12■□□□□ 0.17
VARS-228ENST00000495010 CXCL14O95715 111 aa16.12■□□□□ 0.17
VARS-228ENST00000495010 EOMESO95936 686 aa16.12■□□□□ 0.17
VARS-228ENST00000495010 METAP2P50579 478 aaKnown RBP eCLIP16.12■□□□□ 0.171e-7■■■■□ 24.4
VARS-228ENST00000495010 FGD1P98174 961 aa16.12■□□□□ 0.17
VARS-228ENST00000495010 SLC39A11Q8N1S5 342 aa16.12■□□□□ 0.17
VARS-228ENST00000495010 LRRC71Q8N4P6 559 aa16.12■□□□□ 0.17
VARS-228ENST00000495010 TDRD5Q8NAT2 981 aaKnown RBP16.12■□□□□ 0.17
VARS-228ENST00000495010 HELQQ8TDG4 1101 aa16.12■□□□□ 0.17
VARS-228ENST00000495010 CCDC12Q8WUD4 166 aaPredicted RBP16.12■□□□□ 0.17
VARS-228ENST00000495010 NLRP7Q8WX94 980 aa16.12■□□□□ 0.17
VARS-228ENST00000495010 TMEM169Q96HH4 297 aa16.12■□□□□ 0.17
VARS-228ENST00000495010 ZNF668Q96K58 619 aaPredicted RBP16.12■□□□□ 0.17
VARS-228ENST00000495010 RNF19AQ9NV58 838 aa16.12■□□□□ 0.17
VARS-228ENST00000495010 DACT1Q9NYF0 836 aa16.12■□□□□ 0.17
VARS-228ENST00000495010 DBR1Q9UK59 544 aaKnown RBP16.12■□□□□ 0.17
VARS-228ENST00000495010 BRPF3Q9ULD4 1205 aa16.12■□□□□ 0.17
VARS-228ENST00000495010 KLF18A0A0U1RQI7 1052 aa16.11■□□□□ 0.17
VARS-228ENST00000495010 BRD1O95696 1058 aa16.11■□□□□ 0.17
VARS-228ENST00000495010 FUT2Q10981 343 aa16.11■□□□□ 0.17
VARS-228ENST00000495010 PRR16Q569H4 304 aa16.11■□□□□ 0.17
VARS-228ENST00000495010 CLLU1OSQ5K130 101 aa16.11■□□□□ 0.17
VARS-228ENST00000495010 ATAT1Q5SQI0 421 aa16.11■□□□□ 0.17
VARS-228ENST00000495010 RARS2Q5T160 578 aaKnown RBP16.11■□□□□ 0.17
VARS-228ENST00000495010 DHX32Q7L7V1 743 aaKnown RBP16.11■□□□□ 0.17
VARS-228ENST00000495010 REXO1Q8N1G1 1221 aaKnown RBP16.11■□□□□ 0.17
VARS-228ENST00000495010 TCEANC2Q96MN5 208 aa16.11■□□□□ 0.17
VARS-228ENST00000495010 ADAMTS10Q9H324 1103 aa16.11■□□□□ 0.17
VARS-228ENST00000495010 DZANK1Q9NVP4 752 aa16.11■□□□□ 0.17
VARS-228ENST00000495010 CDH22Q9UJ99 828 aa16.11■□□□□ 0.17
VARS-228ENST00000495010 MYH9P35579 1960 aaKnown RBP16.11■□□□□ 0.17
VARS-228ENST00000495010 TRIOO75962 3097 aa16.1■□□□□ 0.17
VARS-228ENST00000495010 A0A0U1RQF3 1178 aa16.1■□□□□ 0.17
VARS-228ENST00000495010 CCDC196A0A1B0GTZ2 297 aa16.1■□□□□ 0.17
VARS-228ENST00000495010 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.1■□□□□ 0.17
VARS-228ENST00000495010 CARNS1A5YM72 827 aa16.1■□□□□ 0.17
VARS-228ENST00000495010 SPDYE4A6NLX3 237 aa16.1■□□□□ 0.17
VARS-228ENST00000495010 WDR64B1ANS9 1081 aa16.1■□□□□ 0.17
VARS-228ENST00000495010 NT5C1B-RDH14C9J2C7 533 aa16.1■□□□□ 0.17
VARS-228ENST00000495010 OATP04181 439 aa16.1■□□□□ 0.17
VARS-228ENST00000495010 WEE2P0C1S8 567 aa16.1■□□□□ 0.17
VARS-228ENST00000495010 GPC3P51654 580 aa16.1■□□□□ 0.17
VARS-228ENST00000495010 BCAR1P56945 870 aa16.1■□□□□ 0.17
VARS-228ENST00000495010 GIT2Q14161 759 aa16.1■□□□□ 0.17
VARS-228ENST00000495010 PFKFB3Q16875 520 aaPredicted RBP16.1■□□□□ 0.17
VARS-228ENST00000495010 PLCD3Q8N3E9 789 aa16.1■□□□□ 0.17
VARS-228ENST00000495010 ZC3H11AO75152 810 aaKnown RBP eCLIP16.09■□□□□ 0.17
VARS-228ENST00000495010 DARSP14868 501 aaKnown RBP16.09■□□□□ 0.17
VARS-228ENST00000495010 FGFR4P22455 802 aa16.09■□□□□ 0.17
VARS-228ENST00000495010 GNA11P29992 359 aa16.09■□□□□ 0.17
VARS-228ENST00000495010 CDC27P30260 824 aa16.09■□□□□ 0.17
VARS-228ENST00000495010 EXOSC10Q01780 885 aaKnown RBP16.09■□□□□ 0.17
VARS-228ENST00000495010 TBC1D8BQ0IIM8 1120 aa16.09■□□□□ 0.17
VARS-228ENST00000495010 ASTLQ6HA08 431 aaPredicted RBP16.09■□□□□ 0.17
VARS-228ENST00000495010 VPS52Q8N1B4 723 aa16.09■□□□□ 0.17
VARS-228ENST00000495010 CRYGNQ8WXF5 182 aa16.09■□□□□ 0.17
VARS-228ENST00000495010 GCOM2Q9BZD3 368 aaPredicted RBP16.09■□□□□ 0.17
VARS-228ENST00000495010 DISC1Q9NRI5 854 aa16.09■□□□□ 0.17
VARS-228ENST00000495010 LIMD1Q9UGP4 676 aa16.09■□□□□ 0.17
VARS-228ENST00000495010 ESYT2A0FGR8 921 aa16.08■□□□□ 0.16
VARS-228ENST00000495010 PROB1E7EW31 1015 aa16.08■□□□□ 0.16
VARS-228ENST00000495010 ASGR2P07307 311 aa16.08■□□□□ 0.16
VARS-228ENST00000495010 RCAN1P53805 252 aa16.08■□□□□ 0.16
VARS-228ENST00000495010 CDC42EP1Q00587 391 aa16.08■□□□□ 0.16
VARS-228ENST00000495010 FOXK2Q01167 660 aa16.08■□□□□ 0.16
VARS-228ENST00000495010 AKAP17AQ02040 695 aaKnown RBP16.08■□□□□ 0.16
VARS-228ENST00000495010 PRKCEQ02156 737 aa16.08■□□□□ 0.16
VARS-228ENST00000495010 KIAA1841Q6NSI8 718 aa16.08■□□□□ 0.16
VARS-228ENST00000495010 CABP7Q86V35 215 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms