RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 TSPY2A6NKD2 308 aa3.27□□□□□ -1.89
HMGN4-202ENST00000477243 WDR64B1ANS9 1081 aa3.27□□□□□ -1.89
HMGN4-202ENST00000477243 INO80B-WBP1J3KQ70 363 aa3.27□□□□□ -1.89
HMGN4-202ENST00000477243 MASP2O00187 686 aa3.27□□□□□ -1.89
HMGN4-202ENST00000477243 ARVCFO00192 962 aa3.27□□□□□ -1.89
HMGN4-202ENST00000477243 USO1O60763 962 aaKnown RBP3.27□□□□□ -1.89
HMGN4-202ENST00000477243 DNAJA2O60884 412 aa3.27□□□□□ -1.89
HMGN4-202ENST00000477243 TBCAO75347 108 aaKnown RBP3.27□□□□□ -1.89
HMGN4-202ENST00000477243 GHRHP01286 108 aa3.27□□□□□ -1.89
HMGN4-202ENST00000477243 IGHDP01880 384 aa3.27□□□□□ -1.89
HMGN4-202ENST00000477243 SNRPB2P08579 225 aaKnown RBP3.27□□□□□ -1.89
HMGN4-202ENST00000477243 TSPY3P0CV98 308 aa3.27□□□□□ -1.89
HMGN4-202ENST00000477243 TSPY8P0CW00 308 aa3.27□□□□□ -1.89
HMGN4-202ENST00000477243 MYBP10242 640 aa3.27□□□□□ -1.89
HMGN4-202ENST00000477243 MYF5P13349 255 aa3.27□□□□□ -1.89
HMGN4-202ENST00000477243 ACPPP15309 386 aa3.27□□□□□ -1.89
HMGN4-202ENST00000477243 ALOX15P16050 662 aaPredicted RBP3.27□□□□□ -1.89
HMGN4-202ENST00000477243 STMN1P16949 149 aa3.27□□□□□ -1.89
HMGN4-202ENST00000477243 CD247P20963 164 aa3.27□□□□□ -1.89
HMGN4-202ENST00000477243 MSX1P28360 303 aa3.27□□□□□ -1.89
HMGN4-202ENST00000477243 MAN2A2P49641 1150 aa3.27□□□□□ -1.89
HMGN4-202ENST00000477243 COPAP53621 1224 aa3.27□□□□□ -1.89
HMGN4-202ENST00000477243 SLC16A1P53985 500 aa3.27□□□□□ -1.89
HMGN4-202ENST00000477243 SIK1P57059 783 aa3.27□□□□□ -1.89
HMGN4-202ENST00000477243 DCAF7P61962 342 aa3.27□□□□□ -1.89
HMGN4-202ENST00000477243 TMF1P82094 1093 aa3.27□□□□□ -1.89
HMGN4-202ENST00000477243 TSPY1Q01534 308 aa3.27□□□□□ -1.89
HMGN4-202ENST00000477243 TLE2Q04725 743 aa3.27□□□□□ -1.89
HMGN4-202ENST00000477243 EFR3AQ14156 821 aa3.27□□□□□ -1.89
HMGN4-202ENST00000477243 INPP5AQ14642 412 aa3.27□□□□□ -1.89
HMGN4-202ENST00000477243 CNN3Q15417 329 aaKnown RBP3.27□□□□□ -1.89
HMGN4-202ENST00000477243 ZNF174Q15697 407 aa3.27□□□□□ -1.89
HMGN4-202ENST00000477243 SLC14A2Q15849 920 aa3.27□□□□□ -1.89
HMGN4-202ENST00000477243 MEA1Q16626 185 aa3.27□□□□□ -1.89
HMGN4-202ENST00000477243 TMEM177Q53S58 311 aa3.27□□□□□ -1.89
HMGN4-202ENST00000477243 ODF2Q5BJF6 829 aa3.27□□□□□ -1.89
HMGN4-202ENST00000477243 TMEM31Q5JXX7 168 aa3.27□□□□□ -1.89
HMGN4-202ENST00000477243 FBXO47Q5MNV8 452 aa3.27□□□□□ -1.89
HMGN4-202ENST00000477243 UBXN11Q5T124 520 aa3.27□□□□□ -1.89
HMGN4-202ENST00000477243 SLC35F1Q5T1Q4 408 aa3.27□□□□□ -1.89
HMGN4-202ENST00000477243 GPATCH4Q5T3I0 446 aaKnown RBP3.27□□□□□ -1.89
HMGN4-202ENST00000477243 ANKRD45Q5TZF3 282 aa3.27□□□□□ -1.89
HMGN4-202ENST00000477243 GTF2IRD2BQ6EKJ0 949 aa3.27□□□□□ -1.89
HMGN4-202ENST00000477243 ZNF449Q6P9G9 518 aa3.27□□□□□ -1.89
HMGN4-202ENST00000477243 ABHD17CQ6PCB6 329 aa3.27□□□□□ -1.89
HMGN4-202ENST00000477243 LRFN4Q6PJG9 635 aa3.27□□□□□ -1.89
HMGN4-202ENST00000477243 FRMD7Q6ZUT3 714 aa3.27□□□□□ -1.89
HMGN4-202ENST00000477243 CYFIP1Q7L576 1253 aa3.27□□□□□ -1.89
HMGN4-202ENST00000477243 KDELC2Q7Z4H8 507 aa3.27□□□□□ -1.89
HMGN4-202ENST00000477243 GTF2IRD2Q86UP8 949 aa3.27□□□□□ -1.89
HMGN4-202ENST00000477243 PPFIBP1Q86W92 1011 aa3.27□□□□□ -1.89
HMGN4-202ENST00000477243 IQCA1Q86XH1 822 aa3.27□□□□□ -1.89
HMGN4-202ENST00000477243 TMTC1Q8IUR5 882 aa3.27□□□□□ -1.89
HMGN4-202ENST00000477243 MCATQ8IVS2 390 aaKnown RBP3.27□□□□□ -1.89
HMGN4-202ENST00000477243 TMEM192Q8IY95 271 aa3.27□□□□□ -1.89
HMGN4-202ENST00000477243 CACNA2D3Q8IZS8 1091 aa3.27□□□□□ -1.89
HMGN4-202ENST00000477243 VWA5B2Q8N398 1253 aa3.27□□□□□ -1.89
HMGN4-202ENST00000477243 C2orf69Q8N8R5 385 aa3.27□□□□□ -1.89
HMGN4-202ENST00000477243 FAM13CQ8NE31 585 aa3.27□□□□□ -1.89
HMGN4-202ENST00000477243 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.27□□□□□ -1.89
HMGN4-202ENST00000477243 UCMAQ8WVF2 138 aa3.27□□□□□ -1.89
HMGN4-202ENST00000477243 SH3KBP1Q96B97 665 aa3.27□□□□□ -1.89
HMGN4-202ENST00000477243 CCDC74BQ96LY2 380 aa3.27□□□□□ -1.89
HMGN4-202ENST00000477243 ORAI2Q96SN7 254 aa3.27□□□□□ -1.89
HMGN4-202ENST00000477243 NCAPGQ9BPX3 1015 aa3.27□□□□□ -1.89
HMGN4-202ENST00000477243 ALG1Q9BT22 464 aa3.27□□□□□ -1.89
HMGN4-202ENST00000477243 COLEC11Q9BWP8 271 aa3.27□□□□□ -1.89
HMGN4-202ENST00000477243 B3GNT5Q9BYG0 378 aa3.27□□□□□ -1.89
HMGN4-202ENST00000477243 ZCCHC2Q9C0B9 1178 aaKnown RBP3.27□□□□□ -1.89
HMGN4-202ENST00000477243 NKX2-4Q9H2Z4 354 aa3.27□□□□□ -1.89
HMGN4-202ENST00000477243 DEF6Q9H4E7 631 aa3.27□□□□□ -1.89
HMGN4-202ENST00000477243 DCP1AQ9NPI6 582 aaPredicted RBP3.27□□□□□ -1.89
HMGN4-202ENST00000477243 PICK1Q9NRD5 415 aa3.27□□□□□ -1.89
HMGN4-202ENST00000477243 PDRG1Q9NUG6 133 aa3.27□□□□□ -1.89
HMGN4-202ENST00000477243 FAM86C1Q9NVL1 165 aa3.27□□□□□ -1.89
HMGN4-202ENST00000477243 OXSMQ9NWU1 459 aa3.27□□□□□ -1.89
HMGN4-202ENST00000477243 DNAJC28Q9NX36 388 aa3.27□□□□□ -1.89
HMGN4-202ENST00000477243 ORC3Q9UBD5 711 aaPredicted RBP3.27□□□□□ -1.89
HMGN4-202ENST00000477243 AASSQ9UDR5 926 aa3.27□□□□□ -1.89
HMGN4-202ENST00000477243 XPO7Q9UIA9 1087 aaKnown RBP3.27□□□□□ -1.89
HMGN4-202ENST00000477243 ZHX1Q9UKY1 873 aaPredicted RBP3.27□□□□□ -1.89
HMGN4-202ENST00000477243 PA2G4Q9UQ80 394 aaKnown RBP3.27□□□□□ -1.89
HMGN4-202ENST00000477243 SH3BP1Q9Y3L3 701 aa3.27□□□□□ -1.89
HMGN4-202ENST00000477243 ARHGEF12Q9NZN5 1544 aa3.27□□□□□ -1.89
HMGN4-202ENST00000477243 FAM135AQ9P2D6 1515 aa3.27□□□□□ -1.89
HMGN4-202ENST00000477243 ATP10AO60312 1499 aa3.27□□□□□ -1.89
HMGN4-202ENST00000477243 RAPGEF2Q9Y4G8 1499 aa3.27□□□□□ -1.89
HMGN4-202ENST00000477243 PCNX1Q96RV3 2341 aa3.26□□□□□ -1.89
HMGN4-202ENST00000477243 LCHNA4D1U4 455 aa3.26□□□□□ -1.89
HMGN4-202ENST00000477243 H7C0S8 307 aa3.26□□□□□ -1.89
HMGN4-202ENST00000477243 H7C1D1 291 aa3.26□□□□□ -1.89
HMGN4-202ENST00000477243 KPNA5O15131 536 aa3.26□□□□□ -1.89
HMGN4-202ENST00000477243 P4HA2O15460 535 aa3.26□□□□□ -1.89
HMGN4-202ENST00000477243 TBX1O43435 398 aa3.26□□□□□ -1.89
HMGN4-202ENST00000477243 MAFO75444 373 aaPredicted RBP3.26□□□□□ -1.89
HMGN4-202ENST00000477243 SOAT2O75908 522 aa3.26□□□□□ -1.89
HMGN4-202ENST00000477243 KCNH1O95259 989 aa3.26□□□□□ -1.89
HMGN4-202ENST00000477243 DNTTP04053 509 aa3.26□□□□□ -1.89
HMGN4-202ENST00000477243 SLC3A2P08195 630 aaKnown RBP3.26□□□□□ -1.89
HMGN4-202ENST00000477243 MTHFD2P13995 350 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms