RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 FAM50BQ9Y247 325 aa13.16□□□□□ -0.3
VARS2-208ENST00000477052 CYP46A1Q9Y6A2 500 aa13.16□□□□□ -0.3
VARS2-208ENST00000477052 CPLX1O14810 134 aa13.15□□□□□ -0.3
VARS2-208ENST00000477052 MAGEB2O15479 319 aa13.15□□□□□ -0.3
VARS2-208ENST00000477052 SLC37A4O43826 429 aa13.15□□□□□ -0.3
VARS2-208ENST00000477052 PSMD10O75832 226 aa13.15□□□□□ -0.3
VARS2-208ENST00000477052 STBD1O95210 358 aa13.15□□□□□ -0.3
VARS2-208ENST00000477052 ALADP13716 330 aa13.15□□□□□ -0.3
VARS2-208ENST00000477052 GPC3P51654 580 aa13.15□□□□□ -0.3
VARS2-208ENST00000477052 USP11P51784 963 aa13.15□□□□□ -0.3
VARS2-208ENST00000477052 TBC1D8BQ0IIM8 1120 aa13.15□□□□□ -0.3
VARS2-208ENST00000477052 INF2Q27J81 1249 aa13.15□□□□□ -0.3
VARS2-208ENST00000477052 CLLU1OSQ5K130 101 aa13.15□□□□□ -0.3
VARS2-208ENST00000477052 LLGL2Q6P1M3 1020 aa13.15□□□□□ -0.3
VARS2-208ENST00000477052 RNF135Q8IUD6 432 aa13.15□□□□□ -0.3
VARS2-208ENST00000477052 TRIM22Q8IYM9 498 aa13.15□□□□□ -0.3
VARS2-208ENST00000477052 BLIDQ8IZY5 108 aa13.15□□□□□ -0.3
VARS2-208ENST00000477052 NLRP7Q8WX94 980 aa13.15□□□□□ -0.3
VARS2-208ENST00000477052 FAM167AQ96KS9 214 aa13.15□□□□□ -0.3
VARS2-208ENST00000477052 RIT2Q99578 217 aa13.15□□□□□ -0.3
VARS2-208ENST00000477052 SH3GLB2Q9NR46 395 aa13.15□□□□□ -0.3
VARS2-208ENST00000477052 TLR9Q9NR96 1032 aa13.15□□□□□ -0.3
VARS2-208ENST00000477052 PRKAG3Q9UGI9 489 aa13.15□□□□□ -0.3
VARS2-208ENST00000477052 CEP131Q9UPN4 1083 aa13.15□□□□□ -0.3
VARS2-208ENST00000477052 USP15Q9Y4E8 981 aaPredicted RBP13.15□□□□□ -0.3
VARS2-208ENST00000477052 DDX11L8A8MPP1 907 aa13.14□□□□□ -0.31
VARS2-208ENST00000477052 HIDE1A8MVS5 230 aa13.14□□□□□ -0.31
VARS2-208ENST00000477052 PRR33A8MZF0 331 aa13.14□□□□□ -0.31
VARS2-208ENST00000477052 M0R2N6 131 aa13.14□□□□□ -0.31
VARS2-208ENST00000477052 DARSP14868 501 aaKnown RBP13.14□□□□□ -0.31
VARS2-208ENST00000477052 EIF4BP23588 611 aaKnown RBP13.14□□□□□ -0.31
VARS2-208ENST00000477052 TMOD1P28289 359 aa13.14□□□□□ -0.31
VARS2-208ENST00000477052 JAK3P52333 1124 aa13.14□□□□□ -0.31
VARS2-208ENST00000477052 TARBP2Q15633 366 aaKnown RBP13.14□□□□□ -0.31
VARS2-208ENST00000477052 CSPP1Q1MSJ5 1256 aa13.14□□□□□ -0.31
VARS2-208ENST00000477052 ODR4Q5SWX8 454 aa13.14□□□□□ -0.31
VARS2-208ENST00000477052 PLA2G4FQ68DD2 849 aa13.14□□□□□ -0.31
VARS2-208ENST00000477052 ECHDC2Q86YB7 292 aa13.14□□□□□ -0.31
VARS2-208ENST00000477052 KSR1Q8IVT5 923 aa13.14□□□□□ -0.31
VARS2-208ENST00000477052 HELQQ8TDG4 1101 aa13.14□□□□□ -0.31
VARS2-208ENST00000477052 PPP2R3CQ969Q6 453 aa13.14□□□□□ -0.31
VARS2-208ENST00000477052 AAASQ9NRG9 546 aa13.14□□□□□ -0.31
VARS2-208ENST00000477052 PDRG1Q9NUG6 133 aa13.14□□□□□ -0.31
VARS2-208ENST00000477052 CDH22Q9UJ99 828 aa13.14□□□□□ -0.31
VARS2-208ENST00000477052 A0A087WZ62 844 aa13.13□□□□□ -0.31
VARS2-208ENST00000477052 NT5C1B-RDH14C9J2C7 533 aa13.13□□□□□ -0.31
VARS2-208ENST00000477052 EML1O00423 815 aa13.13□□□□□ -0.31
VARS2-208ENST00000477052 DEXIO95424 95 aa13.13□□□□□ -0.31
VARS2-208ENST00000477052 NEFLP07196 543 aa13.13□□□□□ -0.31
VARS2-208ENST00000477052 ZSCAN20P17040 1043 aaPredicted RBP13.13□□□□□ -0.31
VARS2-208ENST00000477052 ATF7P17544 494 aaPredicted RBP13.13□□□□□ -0.31
VARS2-208ENST00000477052 SP100P23497 879 aaPredicted RBP13.13□□□□□ -0.31
VARS2-208ENST00000477052 LETM2Q2VYF4 491 aa13.13□□□□□ -0.31
VARS2-208ENST00000477052 Q4G0T1 1027 aa13.13□□□□□ -0.31
VARS2-208ENST00000477052 KCNT2Q6UVM3 1135 aa13.13□□□□□ -0.31
VARS2-208ENST00000477052 HFE2Q6ZVN8 426 aa13.13□□□□□ -0.31
VARS2-208ENST00000477052 ZNF579Q8NAF0 562 aaKnown RBP13.13□□□□□ -0.31
VARS2-208ENST00000477052 SMRP1Q8NCR6 262 aa13.13□□□□□ -0.31
VARS2-208ENST00000477052 ETNPPLQ8TBG4 499 aa13.13□□□□□ -0.31
VARS2-208ENST00000477052 OXER1Q8TDS5 423 aa13.13□□□□□ -0.31
VARS2-208ENST00000477052 LPPQ93052 612 aa13.13□□□□□ -0.31
VARS2-208ENST00000477052 RPGRIP1Q96KN7 1286 aa13.13□□□□□ -0.31
VARS2-208ENST00000477052 CEP89Q96ST8 783 aa13.13□□□□□ -0.31
VARS2-208ENST00000477052 TCF25Q9BQ70 676 aa13.13□□□□□ -0.31
VARS2-208ENST00000477052 FDXACB1Q9BRP7 624 aaPredicted RBP13.13□□□□□ -0.31
VARS2-208ENST00000477052 TMEM117Q9H0C3 514 aa13.13□□□□□ -0.31
VARS2-208ENST00000477052 ELAC1Q9H777 363 aaKnown RBP13.13□□□□□ -0.31
VARS2-208ENST00000477052 BMP2KQ9NSY1 1161 aaPredicted RBP13.13□□□□□ -0.31
VARS2-208ENST00000477052 DDX25Q9UHL0 483 aaKnown RBP13.13□□□□□ -0.31
VARS2-208ENST00000477052 TRIOO75962 3097 aa13.13□□□□□ -0.31
VARS2-208ENST00000477052 CYP3A7-CYP3A51PA0A087WV96 503 aa13.12□□□□□ -0.31
VARS2-208ENST00000477052 FAM205CA6NFA0 338 aa13.12□□□□□ -0.31
VARS2-208ENST00000477052 MEIS3P2A8K0S8 358 aa13.12□□□□□ -0.31
VARS2-208ENST00000477052 FSCN2O14926 492 aa13.12□□□□□ -0.31
VARS2-208ENST00000477052 EYA4O95677 639 aa13.12□□□□□ -0.31
VARS2-208ENST00000477052 LAG3P18627 525 aa13.12□□□□□ -0.31
VARS2-208ENST00000477052 CYP3A7P24462 503 aa13.12□□□□□ -0.31
VARS2-208ENST00000477052 SFNP31947 248 aa13.12□□□□□ -0.31
VARS2-208ENST00000477052 NPEPPSP55786 919 aa13.12□□□□□ -0.31
VARS2-208ENST00000477052 SCRN1Q12765 414 aa13.12□□□□□ -0.31
VARS2-208ENST00000477052 COASYQ13057 564 aa13.12□□□□□ -0.31
VARS2-208ENST00000477052 NONOQ15233 471 aaKnown RBP eCLIP13.12□□□□□ -0.31
VARS2-208ENST00000477052 DUSP6Q16828 381 aa13.12□□□□□ -0.31
VARS2-208ENST00000477052 XKR3Q5GH77 459 aa13.12□□□□□ -0.31
VARS2-208ENST00000477052 B3GNT9Q6UX72 402 aa13.12□□□□□ -0.31
VARS2-208ENST00000477052 ABI1Q8IZP0 508 aa13.12□□□□□ -0.31
VARS2-208ENST00000477052 MRPS27Q92552 414 aaKnown RBP13.12□□□□□ -0.31
VARS2-208ENST00000477052 ZNF274Q96GC6 653 aaPredicted RBP13.12□□□□□ -0.31
VARS2-208ENST00000477052 ENTPD7Q9NQZ7 604 aa13.12□□□□□ -0.31
VARS2-208ENST00000477052 WRAP73Q9P2S5 460 aaPredicted RBP13.12□□□□□ -0.31
VARS2-208ENST00000477052 CA8P35219 290 aa13.11□□□□□ -0.31
VARS2-208ENST00000477052 TECP42680 631 aa13.11□□□□□ -0.31
VARS2-208ENST00000477052 UBE3AQ05086 875 aa13.11□□□□□ -0.31
VARS2-208ENST00000477052 EARS2Q5JPH6 523 aaKnown RBP13.11□□□□□ -0.31
VARS2-208ENST00000477052 ANO5Q75V66 913 aa13.11□□□□□ -0.31
VARS2-208ENST00000477052 ZNF598Q86UK7 904 aaKnown RBP13.11□□□□□ -0.31
VARS2-208ENST00000477052 RHPN2Q8IUC4 686 aa13.11□□□□□ -0.31
VARS2-208ENST00000477052 LRRC43Q8N309 656 aa13.11□□□□□ -0.31
VARS2-208ENST00000477052 DAGLBQ8NCG7 672 aa13.11□□□□□ -0.31
VARS2-208ENST00000477052 AUTS2Q8WXX7 1259 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms