RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 CALR3Q96L12 384 aaKnown RBP14.86□□□□□ -0.03
BRAT1-203ENST00000467558 ELP3Q9H9T3 547 aa14.86□□□□□ -0.03
BRAT1-203ENST00000467558 ABT1Q9ULW3 272 aaKnown RBP14.86□□□□□ -0.03
BRAT1-203ENST00000467558 PTPN22Q9Y2R2 807 aa14.86□□□□□ -0.03
BRAT1-203ENST00000467558 NPHP3-ACAD11A0A0J9YXS1 232 aa14.86□□□□□ -0.03
BRAT1-203ENST00000467558 H7C0C1 242 aa14.86□□□□□ -0.03
BRAT1-203ENST00000467558 TRIM49P0CI25 452 aa14.86□□□□□ -0.03
BRAT1-203ENST00000467558 TRIM49CP0CI26 452 aa14.86□□□□□ -0.03
BRAT1-203ENST00000467558 ATP5OP48047 213 aa14.86□□□□□ -0.03
BRAT1-203ENST00000467558 STAT5BP51692 787 aa14.86□□□□□ -0.03
BRAT1-203ENST00000467558 TGFB2P61812 414 aa14.86□□□□□ -0.03
BRAT1-203ENST00000467558 MOXD1Q6UVY6 613 aa14.86□□□□□ -0.03
BRAT1-203ENST00000467558 SPATA33Q96N06 139 aa14.86□□□□□ -0.03
BRAT1-203ENST00000467558 INTS2Q9H0H0 1204 aaKnown RBP14.86□□□□□ -0.03
BRAT1-203ENST00000467558 TOPORSQ9NS56 1045 aaPredicted RBP14.86□□□□□ -0.03
BRAT1-203ENST00000467558 DDTLA6NHG4 134 aaPredicted RBP14.85□□□□□ -0.03
BRAT1-203ENST00000467558 RWDD2BP57060 319 aa14.85□□□□□ -0.03
BRAT1-203ENST00000467558 GPC5P78333 572 aa14.85□□□□□ -0.03
BRAT1-203ENST00000467558 BSPRYQ5W0U4 402 aa14.85□□□□□ -0.03
BRAT1-203ENST00000467558 ABI1Q8IZP0 508 aa14.85□□□□□ -0.03
BRAT1-203ENST00000467558 TMEM35BQ8NCS4 154 aa14.85□□□□□ -0.03
BRAT1-203ENST00000467558 ACER1Q8TDN7 264 aa14.85□□□□□ -0.03
BRAT1-203ENST00000467558 MRPL4Q9BYD3 311 aaKnown RBP14.85□□□□□ -0.03
BRAT1-203ENST00000467558 ARHGEF37A1IGU5 675 aa14.85□□□□□ -0.03
BRAT1-203ENST00000467558 SEC31AO94979 1220 aaKnown RBP14.85□□□□□ -0.03
BRAT1-203ENST00000467558 PDXDC1Q6P996 788 aa14.85□□□□□ -0.03
BRAT1-203ENST00000467558 SCARA5Q6ZMJ2 495 aa14.85□□□□□ -0.03
BRAT1-203ENST00000467558 ENOSF1Q7L5Y1 443 aa14.85□□□□□ -0.03
BRAT1-203ENST00000467558 LRP10Q7Z4F1 713 aa14.85□□□□□ -0.03
BRAT1-203ENST00000467558 ERICH1Q86X53 443 aa14.85□□□□□ -0.03
BRAT1-203ENST00000467558 ADAM22Q9P0K1 906 aa14.85□□□□□ -0.03
BRAT1-203ENST00000467558 DIS3Q9Y2L1 958 aaKnown RBP14.85□□□□□ -0.03
BRAT1-203ENST00000467558 PIK3C2AO00443 1686 aa14.85□□□□□ -0.03
BRAT1-203ENST00000467558 GNAT1P11488 350 aa14.85□□□□□ -0.03
BRAT1-203ENST00000467558 EFNA5P52803 228 aa14.85□□□□□ -0.03
BRAT1-203ENST00000467558 PPP2R5DQ14738 602 aa14.85□□□□□ -0.03
BRAT1-203ENST00000467558 SAAL1Q96ER3 474 aa14.85□□□□□ -0.03
BRAT1-203ENST00000467558 AGBL1Q96MI9 1066 aa14.85□□□□□ -0.03
BRAT1-203ENST00000467558 TBXAS1P24557 533 aaPredicted RBP14.84□□□□□ -0.03
BRAT1-203ENST00000467558 PLTPP55058 493 aa14.84□□□□□ -0.03
BRAT1-203ENST00000467558 CCZ1BP86790 482 aa14.84□□□□□ -0.03
BRAT1-203ENST00000467558 CCZ1P86791 482 aaPredicted RBP14.84□□□□□ -0.03
BRAT1-203ENST00000467558 C15orf52Q6ZUT6 534 aaKnown RBP14.84□□□□□ -0.03
BRAT1-203ENST00000467558 FBXL13Q8NEE6 735 aa14.84□□□□□ -0.03
BRAT1-203ENST00000467558 ATP2A3Q93084 1043 aa14.84□□□□□ -0.03
BRAT1-203ENST00000467558 HEXIM2Q96MH2 286 aaKnown RBP14.84□□□□□ -0.03
BRAT1-203ENST00000467558 RABEP2Q9H5N1 569 aa14.84□□□□□ -0.03
BRAT1-203ENST00000467558 IL17RBQ9NRM6 502 aa14.84□□□□□ -0.03
BRAT1-203ENST00000467558 CNOT8Q9UFF9 292 aaKnown RBP14.84□□□□□ -0.03
BRAT1-203ENST00000467558 HACL1Q9UJ83 578 aa14.84□□□□□ -0.03
BRAT1-203ENST00000467558 EMSYQ7Z589 1322 aa14.84□□□□□ -0.03
BRAT1-203ENST00000467558 STX2P32856 288 aa14.84□□□□□ -0.03
BRAT1-203ENST00000467558 CLCN6P51797 869 aa14.84□□□□□ -0.03
BRAT1-203ENST00000467558 METTL23Q86XA0 190 aa14.84□□□□□ -0.03
BRAT1-203ENST00000467558 RHPN2Q8IUC4 686 aa14.84□□□□□ -0.03
BRAT1-203ENST00000467558 GPD1LQ8N335 351 aa14.84□□□□□ -0.03
BRAT1-203ENST00000467558 IL17RAQ96F46 866 aa14.84□□□□□ -0.03
BRAT1-203ENST00000467558 FBXO28Q9NVF7 368 aa14.84□□□□□ -0.03
BRAT1-203ENST00000467558 TMX2Q9Y320 296 aa14.84□□□□□ -0.03
BRAT1-203ENST00000467558 KIAA0391O15091 583 aaKnown RBP14.84□□□□□ -0.03
BRAT1-203ENST00000467558 KRT1P04264 644 aa14.84□□□□□ -0.03
BRAT1-203ENST00000467558 PRAMEF18Q5VWM3 479 aa14.84□□□□□ -0.03
BRAT1-203ENST00000467558 RFX6Q8HWS3 928 aa14.84□□□□□ -0.03
BRAT1-203ENST00000467558 ANKS1AQ92625 1134 aa14.84□□□□□ -0.03
BRAT1-203ENST00000467558 POLR3CQ9BUI4 534 aaPredicted RBP14.84□□□□□ -0.03
BRAT1-203ENST00000467558 AGO2Q9UKV8 859 aaKnown RBP14.84□□□□□ -0.03
BRAT1-203ENST00000467558 RIC1Q4ADV7 1423 aa14.84□□□□□ -0.03
BRAT1-203ENST00000467558 PPP1R3GB7ZBB8 358 aa14.84□□□□□ -0.03
BRAT1-203ENST00000467558 SLC37A4O43826 429 aa14.84□□□□□ -0.03
BRAT1-203ENST00000467558 ICAM1P05362 532 aa14.84□□□□□ -0.03
BRAT1-203ENST00000467558 MRPS9P82933 396 aaKnown RBP14.84□□□□□ -0.03
BRAT1-203ENST00000467558 LLGL1Q15334 1064 aa14.84□□□□□ -0.03
BRAT1-203ENST00000467558 GLE1Q53GS7 698 aaKnown RBP14.84□□□□□ -0.03
BRAT1-203ENST00000467558 OR6B2Q6IFH4 312 aa14.84□□□□□ -0.03
BRAT1-203ENST00000467558 KCNF1Q9H3M0 494 aa14.84□□□□□ -0.03
BRAT1-203ENST00000467558 ECE1P42892 770 aa14.83□□□□□ -0.03
BRAT1-203ENST00000467558 FXR1P51114 621 aaKnown RBP eCLIP14.83□□□□□ -0.03
BRAT1-203ENST00000467558 GNGT1P63211 74 aa14.83□□□□□ -0.03
BRAT1-203ENST00000467558 ARMCX2Q7L311 632 aa14.83□□□□□ -0.03
BRAT1-203ENST00000467558 SCYL3Q8IZE3 742 aa14.83□□□□□ -0.03
BRAT1-203ENST00000467558 GMCL1P1Q8NEA9 526 aa14.83□□□□□ -0.03
BRAT1-203ENST00000467558 UHMK1Q8TAS1 419 aaKnown RBP14.83□□□□□ -0.03
BRAT1-203ENST00000467558 ATG4CQ96DT6 458 aa14.83□□□□□ -0.03
BRAT1-203ENST00000467558 LRRC4Q9HBW1 653 aa14.83□□□□□ -0.03
BRAT1-203ENST00000467558 SCAF8Q9UPN6 1271 aaKnown RBP14.83□□□□□ -0.03
BRAT1-203ENST00000467558 LRRD1A4D1F6 860 aa14.83□□□□□ -0.04
BRAT1-203ENST00000467558 SGK1O00141 431 aa14.83□□□□□ -0.04
BRAT1-203ENST00000467558 FGGP02679 453 aa14.83□□□□□ -0.04
BRAT1-203ENST00000467558 MTF1Q14872 753 aa14.83□□□□□ -0.04
BRAT1-203ENST00000467558 ZNF699Q32M78 642 aa14.83□□□□□ -0.04
BRAT1-203ENST00000467558 E4F1Q66K89 784 aaPredicted RBP14.83□□□□□ -0.04
BRAT1-203ENST00000467558 TMEM270Q6UE05 265 aa14.83□□□□□ -0.04
BRAT1-203ENST00000467558 NME8Q8N427 588 aa14.83□□□□□ -0.04
BRAT1-203ENST00000467558 WHAMMQ8TF30 809 aa14.83□□□□□ -0.04
BRAT1-203ENST00000467558 SEPT1Q8WYJ6 367 aa14.83□□□□□ -0.04
BRAT1-203ENST00000467558 MTFR1LQ9H019 292 aa14.83□□□□□ -0.04
BRAT1-203ENST00000467558 KCNH7Q9NS40 1196 aa14.83□□□□□ -0.04
BRAT1-203ENST00000467558 TXNP10599 105 aaKnown RBP14.83□□□□□ -0.04
BRAT1-203ENST00000467558 RPS6P62753 249 aaKnown RBP14.83□□□□□ -0.04
BRAT1-203ENST00000467558 PPARDQ03181 441 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms