RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 BHMT2Q9H2M3 363 aa5.38□□□□□ -1.55
EPHA3-202ENST00000452448 PLCB1Q9NQ66 1216 aa5.38□□□□□ -1.55
EPHA3-202ENST00000452448 FARSBQ9NSD9 589 aaKnown RBP5.38□□□□□ -1.55
EPHA3-202ENST00000452448 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.38□□□□□ -1.55
EPHA3-202ENST00000452448 EMC3Q9P0I2 261 aa5.38□□□□□ -1.55
EPHA3-202ENST00000452448 TMEM5Q9Y2B1 443 aa5.38□□□□□ -1.55
EPHA3-202ENST00000452448 TELO2Q9Y4R8 837 aa5.38□□□□□ -1.55
EPHA3-202ENST00000452448 AFG3L2Q9Y4W6 797 aa5.38□□□□□ -1.55
EPHA3-202ENST00000452448 PREX2Q70Z35 1606 aa5.38□□□□□ -1.55
EPHA3-202ENST00000452448 PLXNC1O60486 1568 aa5.38□□□□□ -1.55
EPHA3-202ENST00000452448 ARHGAP10A1A4S6 786 aa5.38□□□□□ -1.55
EPHA3-202ENST00000452448 ANO9A1A5B4 782 aa5.38□□□□□ -1.55
EPHA3-202ENST00000452448 PI4K2BG5E9Z4 385 aa5.38□□□□□ -1.55
EPHA3-202ENST00000452448 TNFRSF10AO00220 468 aa5.38□□□□□ -1.55
EPHA3-202ENST00000452448 VWA5AO00534 786 aa5.38□□□□□ -1.55
EPHA3-202ENST00000452448 CDK2AP1O14519 115 aa5.38□□□□□ -1.55
EPHA3-202ENST00000452448 NVLO15381 856 aaKnown RBP5.38□□□□□ -1.55
EPHA3-202ENST00000452448 USO1O60763 962 aaKnown RBP5.38□□□□□ -1.55
EPHA3-202ENST00000452448 TSPAN9O75954 239 aa5.38□□□□□ -1.55
EPHA3-202ENST00000452448 DKK1O94907 266 aa5.38□□□□□ -1.55
EPHA3-202ENST00000452448 PGRP06401 933 aa5.38□□□□□ -1.55
EPHA3-202ENST00000452448 HADHAP40939 763 aa5.38□□□□□ -1.55
EPHA3-202ENST00000452448 ASMTP46597 345 aa5.38□□□□□ -1.55
EPHA3-202ENST00000452448 E2F2Q14209 437 aa5.38□□□□□ -1.55
EPHA3-202ENST00000452448 BCL2A1Q16548 175 aa5.38□□□□□ -1.55
EPHA3-202ENST00000452448 HSP90AA4PQ58FG1 418 aa5.38□□□□□ -1.55
EPHA3-202ENST00000452448 CCDC62Q6P9F0 684 aa5.38□□□□□ -1.55
EPHA3-202ENST00000452448 C1orf122Q6ZSJ8 110 aa5.38□□□□□ -1.55
EPHA3-202ENST00000452448 ITPRIPQ8IWB1 547 aa5.38□□□□□ -1.55
EPHA3-202ENST00000452448 ZNF687Q8N1G0 1237 aa5.38□□□□□ -1.55
EPHA3-202ENST00000452448 PI4K2BQ8TCG2 481 aa5.38□□□□□ -1.55
EPHA3-202ENST00000452448 MAIP1Q8WWC4 291 aa5.38□□□□□ -1.55
EPHA3-202ENST00000452448 IRGQQ8WZA9 623 aa5.38□□□□□ -1.55
EPHA3-202ENST00000452448 DHX58Q96C10 678 aa5.38□□□□□ -1.55
EPHA3-202ENST00000452448 GMCL1Q96IK5 515 aa5.38□□□□□ -1.55
EPHA3-202ENST00000452448 CCDC106Q9BWC9 280 aa5.38□□□□□ -1.55
EPHA3-202ENST00000452448 ADNPQ9H2P0 1102 aa5.38□□□□□ -1.55
EPHA3-202ENST00000452448 CRLF2Q9HC73 371 aa5.38□□□□□ -1.55
EPHA3-202ENST00000452448 COPRSQ9NQ92 184 aa5.38□□□□□ -1.55
EPHA3-202ENST00000452448 ZNF277Q9NRM2 450 aaPredicted RBP5.38□□□□□ -1.55
EPHA3-202ENST00000452448 STK32BQ9NY57 414 aa5.38□□□□□ -1.55
EPHA3-202ENST00000452448 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.38□□□□□ -1.55
EPHA3-202ENST00000452448 A2MP01023 1474 aa5.38□□□□□ -1.55
EPHA3-202ENST00000452448 NCOA3Q9Y6Q9 1424 aa5.38□□□□□ -1.55
EPHA3-202ENST00000452448 IQGAP3Q86VI3 1631 aa5.38□□□□□ -1.55
EPHA3-202ENST00000452448 SYNMO15061 1565 aa5.38□□□□□ -1.55
EPHA3-202ENST00000452448 RPAP1Q9BWH6 1393 aaPredicted RBP5.38□□□□□ -1.55
EPHA3-202ENST00000452448 ZNF335Q9H4Z2 1342 aaPredicted RBP5.37□□□□□ -1.55
EPHA3-202ENST00000452448 PNMA6FA0A0J9YX94 578 aa5.37□□□□□ -1.55
EPHA3-202ENST00000452448 HNRNPCL2B2RXH8 293 aa5.37□□□□□ -1.55
EPHA3-202ENST00000452448 IGF2BP3O00425 579 aaKnown RBP eCLIP5.37□□□□□ -1.55
EPHA3-202ENST00000452448 MTSS1O43312 755 aa5.37□□□□□ -1.55
EPHA3-202ENST00000452448 CCNT1O60563 726 aaKnown RBP5.37□□□□□ -1.55
EPHA3-202ENST00000452448 HNRNPCL1O60812 293 aaKnown RBP5.37□□□□□ -1.55
EPHA3-202ENST00000452448 H2AFXP16104 143 aaPredicted RBP5.37□□□□□ -1.55
EPHA3-202ENST00000452448 GNA15P30679 374 aa5.37□□□□□ -1.55
EPHA3-202ENST00000452448 PPP1R2P41236 205 aa5.37□□□□□ -1.55
EPHA3-202ENST00000452448 AMPHP49418 695 aa5.37□□□□□ -1.55
EPHA3-202ENST00000452448 VPS41P49754 854 aa5.37□□□□□ -1.55
EPHA3-202ENST00000452448 MTTPP55157 894 aa5.37□□□□□ -1.55
EPHA3-202ENST00000452448 MRPS15P82914 257 aaKnown RBP5.37□□□□□ -1.55
EPHA3-202ENST00000452448 NFKB2Q00653 900 aa5.37□□□□□ -1.55
EPHA3-202ENST00000452448 KIF5AQ12840 1032 aa5.37□□□□□ -1.55
EPHA3-202ENST00000452448 SGCGQ13326 291 aa5.37□□□□□ -1.55
EPHA3-202ENST00000452448 ELF2Q15723 593 aa5.37□□□□□ -1.55
EPHA3-202ENST00000452448 WHAMMP3Q1A5X7 153 aa5.37□□□□□ -1.55
EPHA3-202ENST00000452448 KLHL40Q2TBA0 621 aa5.37□□□□□ -1.55
EPHA3-202ENST00000452448 CCDC40Q4G0X9 1142 aa5.37□□□□□ -1.55
EPHA3-202ENST00000452448 CCDC38Q502W7 563 aa5.37□□□□□ -1.55
EPHA3-202ENST00000452448 SLC44A4Q53GD3 710 aa5.37□□□□□ -1.55
EPHA3-202ENST00000452448 FCRLBQ6BAA4 426 aa5.37□□□□□ -1.55
EPHA3-202ENST00000452448 PPP1R2P3Q6NXS1 205 aa5.37□□□□□ -1.55
EPHA3-202ENST00000452448 TUBA3EQ6PEY2 450 aa5.37□□□□□ -1.55
EPHA3-202ENST00000452448 LPCAT2Q7L5N7 544 aa5.37□□□□□ -1.55
EPHA3-202ENST00000452448 EEPD1Q7L9B9 569 aa5.37□□□□□ -1.55
EPHA3-202ENST00000452448 THNSL2Q86YJ6 484 aa5.37□□□□□ -1.55
EPHA3-202ENST00000452448 CELF2-AS1Q8N7Q2 184 aa5.37□□□□□ -1.55
EPHA3-202ENST00000452448 PPM1NQ8N819 430 aa5.37□□□□□ -1.55
EPHA3-202ENST00000452448 ENAHQ8N8S7 591 aaPredicted RBP5.37□□□□□ -1.55
EPHA3-202ENST00000452448 TPCN2Q8NHX9 752 aa5.37□□□□□ -1.55
EPHA3-202ENST00000452448 NOC3LQ8WTT2 800 aaKnown RBP5.37□□□□□ -1.55
EPHA3-202ENST00000452448 HOOK2Q96ED9 719 aa5.37□□□□□ -1.55
EPHA3-202ENST00000452448 CMTM3Q96MX0 182 aa5.37□□□□□ -1.55
EPHA3-202ENST00000452448 TESK2Q96S53 571 aa5.37□□□□□ -1.55
EPHA3-202ENST00000452448 WNT5BQ9H1J7 359 aa5.37□□□□□ -1.55
EPHA3-202ENST00000452448 TPK1Q9H3S4 243 aa5.37□□□□□ -1.55
EPHA3-202ENST00000452448 PSTPIP2Q9H939 334 aa5.37□□□□□ -1.55
EPHA3-202ENST00000452448 CCDC177Q9NQR7 707 aaPredicted RBP5.37□□□□□ -1.55
EPHA3-202ENST00000452448 KCND1Q9NSA2 647 aa5.37□□□□□ -1.55
EPHA3-202ENST00000452448 PCMTD2Q9NV79 361 aa5.37□□□□□ -1.55
EPHA3-202ENST00000452448 MOSPD1Q9UJG1 213 aa5.37□□□□□ -1.55
EPHA3-202ENST00000452448 ZNF112Q9UJU3 913 aa5.37□□□□□ -1.55
EPHA3-202ENST00000452448 DSEQ9UL01 958 aa5.37□□□□□ -1.55
EPHA3-202ENST00000452448 ADAMTS8Q9UP79 889 aa5.37□□□□□ -1.55
EPHA3-202ENST00000452448 hCG_1642624A0A1W2PR95 340 aa5.37□□□□□ -1.55
EPHA3-202ENST00000452448 SLC12A8A0AV02 714 aa5.37□□□□□ -1.55
EPHA3-202ENST00000452448 LRRIQ3A6PVS8 624 aaPredicted RBP5.37□□□□□ -1.55
EPHA3-202ENST00000452448 VSTM5A8MXK1 200 aa5.37□□□□□ -1.55
EPHA3-202ENST00000452448 PLOD2O00469 737 aa5.37□□□□□ -1.55
EPHA3-202ENST00000452448 LIN7AO14910 233 aaPredicted RBP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms