RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 FOXP3Q9BZS1 431 aa6.33□□□□□ -1.4
TM9SF3-202ENST00000443638 OSBPL5Q9H0X9 879 aaPredicted RBP6.33□□□□□ -1.4
TM9SF3-202ENST00000443638 SLC6A20Q9NP91 592 aa6.33□□□□□ -1.4
TM9SF3-202ENST00000443638 RASSF1Q9NS23 344 aa6.33□□□□□ -1.4
TM9SF3-202ENST00000443638 POLG2Q9UHN1 485 aa6.33□□□□□ -1.4
TM9SF3-202ENST00000443638 DSEQ9UL01 958 aa6.33□□□□□ -1.4
TM9SF3-202ENST00000443638 CORO2BQ9UQ03 480 aa6.33□□□□□ -1.4
TM9SF3-202ENST00000443638 EYA2O00167 538 aa6.32□□□□□ -1.4
TM9SF3-202ENST00000443638 FOXN3O00409 490 aaPredicted RBP6.32□□□□□ -1.4
TM9SF3-202ENST00000443638 ADAMTS3O15072 1205 aa6.32□□□□□ -1.4
TM9SF3-202ENST00000443638 GAS2O43903 313 aaKnown RBP6.32□□□□□ -1.4
TM9SF3-202ENST00000443638 PPP1R11O60927 126 aaPredicted RBP6.32□□□□□ -1.4
TM9SF3-202ENST00000443638 PAPLNO95428 1278 aa6.32□□□□□ -1.4
TM9SF3-202ENST00000443638 CSTBP04080 98 aaKnown RBP6.32□□□□□ -1.4
TM9SF3-202ENST00000443638 SLURP2P0DP57 97 aa6.32□□□□□ -1.4
TM9SF3-202ENST00000443638 ELNP15502 786 aa6.32□□□□□ -1.4
TM9SF3-202ENST00000443638 ENDOUP21128 410 aaKnown RBP6.32□□□□□ -1.4
TM9SF3-202ENST00000443638 DSC2Q02487 901 aa6.32□□□□□ -1.4
TM9SF3-202ENST00000443638 TMEM132BQ14DG7 1078 aa6.32□□□□□ -1.4
TM9SF3-202ENST00000443638 CCDC38Q502W7 563 aa6.32□□□□□ -1.4
TM9SF3-202ENST00000443638 MZT2BQ6NZ67 158 aa6.32□□□□□ -1.4
TM9SF3-202ENST00000443638 CFAP161Q6P656 301 aa6.32□□□□□ -1.4
TM9SF3-202ENST00000443638 C16orf54Q6UWD8 224 aa6.32□□□□□ -1.4
TM9SF3-202ENST00000443638 RNF111Q6ZNA4 994 aa6.32□□□□□ -1.4
TM9SF3-202ENST00000443638 PDZD4Q76G19 769 aaPredicted RBP6.32□□□□□ -1.4
TM9SF3-202ENST00000443638 RIOX2Q8IUF8 465 aa6.32□□□□□ -1.4
TM9SF3-202ENST00000443638 DRC7Q8IY82 874 aa6.32□□□□□ -1.4
TM9SF3-202ENST00000443638 CACNA2D3Q8IZS8 1091 aa6.32□□□□□ -1.4
TM9SF3-202ENST00000443638 GIMAP8Q8ND71 665 aaPredicted RBP6.32□□□□□ -1.4
TM9SF3-202ENST00000443638 FOXRED1Q96CU9 486 aaPredicted RBP6.32□□□□□ -1.4
TM9SF3-202ENST00000443638 SERINC2Q96SA4 455 aa6.32□□□□□ -1.4
TM9SF3-202ENST00000443638 PPP1R16BQ96T49 567 aa6.32□□□□□ -1.4
TM9SF3-202ENST00000443638 COLEC11Q9BWP8 271 aa6.32□□□□□ -1.4
TM9SF3-202ENST00000443638 PDGFDQ9GZP0 370 aaPredicted RBP6.32□□□□□ -1.4
TM9SF3-202ENST00000443638 POFUT1Q9H488 388 aa6.32□□□□□ -1.4
TM9SF3-202ENST00000443638 DPP7Q9UHL4 492 aa6.32□□□□□ -1.4
TM9SF3-202ENST00000443638 NUMBLQ9Y6R0 609 aa6.32□□□□□ -1.4
TM9SF3-202ENST00000443638 FAM90A27PA6NNH2 459 aa6.31□□□□□ -1.4
TM9SF3-202ENST00000443638 BUB1BO60566 1050 aaPredicted RBP6.31□□□□□ -1.4
TM9SF3-202ENST00000443638 ALX3O95076 343 aa6.31□□□□□ -1.4
TM9SF3-202ENST00000443638 IGHA1P01876 353 aa6.31□□□□□ -1.4
TM9SF3-202ENST00000443638 PYGLP06737 847 aa6.31□□□□□ -1.4
TM9SF3-202ENST00000443638 FAM87AP0C7U9 286 aa6.31□□□□□ -1.4
TM9SF3-202ENST00000443638 PDIA3P30101 505 aaKnown RBP6.31□□□□□ -1.4
TM9SF3-202ENST00000443638 GJA4P35212 333 aa6.31□□□□□ -1.4
TM9SF3-202ENST00000443638 STT3AP46977 705 aa6.31□□□□□ -1.4
TM9SF3-202ENST00000443638 MAP2K6P52564 334 aa6.31□□□□□ -1.4
TM9SF3-202ENST00000443638 TUSC3Q13454 348 aa6.31□□□□□ -1.4
TM9SF3-202ENST00000443638 TRIM25Q14258 630 aaKnown RBP6.31□□□□□ -1.4
TM9SF3-202ENST00000443638 RSRC2Q7L4I2 434 aaKnown RBP6.31□□□□□ -1.4
TM9SF3-202ENST00000443638 RTN4RL1Q86UN2 441 aaPredicted RBP6.31□□□□□ -1.4
TM9SF3-202ENST00000443638 PHYKPLQ8IUZ5 450 aa6.31□□□□□ -1.4
TM9SF3-202ENST00000443638 SVOPQ8N4V2 548 aa6.31□□□□□ -1.4
TM9SF3-202ENST00000443638 PLEKHO2Q8TD55 490 aa6.31□□□□□ -1.4
TM9SF3-202ENST00000443638 ANKS1AQ92625 1134 aa6.31□□□□□ -1.4
TM9SF3-202ENST00000443638 GATA6Q92908 595 aa6.31□□□□□ -1.4
TM9SF3-202ENST00000443638 UBXN10Q96LJ8 280 aa6.31□□□□□ -1.4
TM9SF3-202ENST00000443638 UBL7Q96S82 380 aaPredicted RBP6.31□□□□□ -1.4
TM9SF3-202ENST00000443638 CDADC1Q9BWV3 514 aa6.31□□□□□ -1.4
TM9SF3-202ENST00000443638 TMEM120AQ9BXJ8 343 aa6.31□□□□□ -1.4
TM9SF3-202ENST00000443638 CEP41Q9BYV8 373 aa6.31□□□□□ -1.4
TM9SF3-202ENST00000443638 TRIT1Q9H3H1 467 aaKnown RBP6.31□□□□□ -1.4
TM9SF3-202ENST00000443638 ERVK13-1Q9NX77 482 aa6.31□□□□□ -1.4
TM9SF3-202ENST00000443638 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.31□□□□□ -1.4
TM9SF3-202ENST00000443638 ASAP1Q9ULH1 1129 aa6.31□□□□□ -1.4
TM9SF3-202ENST00000443638 SLC45A1Q9Y2W3 748 aa6.31□□□□□ -1.4
TM9SF3-202ENST00000443638 TELO2Q9Y4R8 837 aa6.31□□□□□ -1.4
TM9SF3-202ENST00000443638 PCDHGB2Q9Y5G2 931 aa6.31□□□□□ -1.4
TM9SF3-202ENST00000443638 WASH4PA8MWX3 477 aa6.3□□□□□ -1.4
TM9SF3-202ENST00000443638 DGKIO75912 1065 aa6.3□□□□□ -1.4
TM9SF3-202ENST00000443638 ARHGEF15O94989 841 aa6.3□□□□□ -1.4
TM9SF3-202ENST00000443638 PFKMP08237 780 aa6.3□□□□□ -1.4
TM9SF3-202ENST00000443638 DHRS4L1P0CG22 281 aa6.3□□□□□ -1.4
TM9SF3-202ENST00000443638 AMPD1P23109 780 aa6.3□□□□□ -1.4
TM9SF3-202ENST00000443638 TECP42680 631 aa6.3□□□□□ -1.4
TM9SF3-202ENST00000443638 BCAR1P56945 870 aa6.3□□□□□ -1.4
TM9SF3-202ENST00000443638 RAB1AP62820 205 aa6.3□□□□□ -1.4
TM9SF3-202ENST00000443638 MPP1Q00013 466 aa6.3□□□□□ -1.4
TM9SF3-202ENST00000443638 MALLQ13021 153 aa6.3□□□□□ -1.4
TM9SF3-202ENST00000443638 ICE2Q659A1 982 aa6.3□□□□□ -1.4
TM9SF3-202ENST00000443638 HIBCHQ6NVY1 386 aaPredicted RBP6.3□□□□□ -1.4
TM9SF3-202ENST00000443638 KCTD1Q719H9 257 aa6.3□□□□□ -1.4
TM9SF3-202ENST00000443638 KANSL1Q7Z3B3 1105 aa6.3□□□□□ -1.4
TM9SF3-202ENST00000443638 C7orf31Q8N865 590 aa6.3□□□□□ -1.4
TM9SF3-202ENST00000443638 WHAMMQ8TF30 809 aa6.3□□□□□ -1.4
TM9SF3-202ENST00000443638 NRG4Q8WWG1 115 aa6.3□□□□□ -1.4
TM9SF3-202ENST00000443638 NT5C1BQ96P26 610 aa6.3□□□□□ -1.4
TM9SF3-202ENST00000443638 LRRC27Q9C0I9 530 aa6.3□□□□□ -1.4
TM9SF3-202ENST00000443638 KMT5AQ9NQR1 393 aa6.3□□□□□ -1.4
TM9SF3-202ENST00000443638 SCOCQ9UIL1 159 aa6.3□□□□□ -1.4
TM9SF3-202ENST00000443638 TPCN1Q9ULQ1 816 aa6.3□□□□□ -1.4
TM9SF3-202ENST00000443638 RABGAP1Q9Y3P9 1069 aa6.3□□□□□ -1.4
TM9SF3-202ENST00000443638 NR2E3Q9Y5X4 410 aa6.3□□□□□ -1.4
TM9SF3-202ENST00000443638 CFAP20Q9Y6A4 193 aaKnown RBP6.3□□□□□ -1.4
TM9SF3-202ENST00000443638 SLC4A7Q9Y6M7 1214 aa6.3□□□□□ -1.4
TM9SF3-202ENST00000443638 C22orf46C9J442 243 aa6.29□□□□□ -1.4
TM9SF3-202ENST00000443638 FOXP2O15409 715 aa6.29□□□□□ -1.4
TM9SF3-202ENST00000443638 SART1O43290 800 aaKnown RBP6.29□□□□□ -1.4
TM9SF3-202ENST00000443638 FKTNO75072 461 aa6.29□□□□□ -1.4
TM9SF3-202ENST00000443638 PTPN1P18031 435 aaKnown RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms