RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 MTFR1LQ9H019 292 aa11.39□□□□□ -0.59
CPNE1-218ENST00000439806 TMEM206Q9H813 350 aa11.39□□□□□ -0.59
CPNE1-218ENST00000439806 PXMP2Q9NR77 195 aa11.39□□□□□ -0.59
CPNE1-218ENST00000439806 ADAMTS1Q9UHI8 967 aa11.39□□□□□ -0.59
CPNE1-218ENST00000439806 ZHX2Q9Y6X8 837 aa11.39□□□□□ -0.59
CPNE1-218ENST00000439806 ASTN2O75129 1339 aaPredicted RBP11.38□□□□□ -0.59
CPNE1-218ENST00000439806 DOCK5Q9H7D0 1870 aa11.38□□□□□ -0.59
CPNE1-218ENST00000439806 WDR90Q96KV7 1748 aa11.38□□□□□ -0.59
CPNE1-218ENST00000439806 A0A0U1RQG5 324 aaPredicted RBP11.38□□□□□ -0.59
CPNE1-218ENST00000439806 TESPA1A2RU30 521 aaPredicted RBP11.38□□□□□ -0.59
CPNE1-218ENST00000439806 BTNL10A8MVZ5 291 aa11.38□□□□□ -0.59
CPNE1-218ENST00000439806 MAP2K7O14733 419 aa11.38□□□□□ -0.59
CPNE1-218ENST00000439806 N4BP1O75113 896 aaKnown RBP11.38□□□□□ -0.59
CPNE1-218ENST00000439806 PALMO75781 387 aa11.38□□□□□ -0.59
CPNE1-218ENST00000439806 PPP1R37O75864 691 aa11.38□□□□□ -0.59
CPNE1-218ENST00000439806 CCDC172P0C7W6 258 aa11.38□□□□□ -0.59
CPNE1-218ENST00000439806 PLS3P13797 630 aa11.38□□□□□ -0.59
CPNE1-218ENST00000439806 SFNP31947 248 aa11.38□□□□□ -0.59
CPNE1-218ENST00000439806 RARRES1P49788 294 aa11.38□□□□□ -0.59
CPNE1-218ENST00000439806 JAM2P57087 298 aa11.38□□□□□ -0.59
CPNE1-218ENST00000439806 PSMC5P62195 406 aa11.38□□□□□ -0.59
CPNE1-218ENST00000439806 KRT76Q01546 638 aa11.38□□□□□ -0.59
CPNE1-218ENST00000439806 PTK2Q05397 1052 aa11.38□□□□□ -0.59
CPNE1-218ENST00000439806 ITIH3Q06033 890 aa11.38□□□□□ -0.59
CPNE1-218ENST00000439806 XRRA1Q6P2D8 792 aa11.38□□□□□ -0.59
CPNE1-218ENST00000439806 ZNF571Q7Z3V5 609 aaPredicted RBP11.38□□□□□ -0.59
CPNE1-218ENST00000439806 IRF2BP2Q7Z5L9 587 aa11.38□□□□□ -0.59
CPNE1-218ENST00000439806 CREG2Q8IUH2 290 aa11.38□□□□□ -0.59
CPNE1-218ENST00000439806 SLC9A9Q8IVB4 645 aa11.38□□□□□ -0.59
CPNE1-218ENST00000439806 COG1Q8WTW3 980 aa11.38□□□□□ -0.59
CPNE1-218ENST00000439806 RUBCNQ92622 972 aa11.38□□□□□ -0.59
CPNE1-218ENST00000439806 TAF4BQ92750 862 aa11.38□□□□□ -0.59
CPNE1-218ENST00000439806 RMDN3Q96TC7 470 aa11.38□□□□□ -0.59
CPNE1-218ENST00000439806 PDCD2LQ9BRP1 358 aa11.38□□□□□ -0.59
CPNE1-218ENST00000439806 INTS2Q9H0H0 1204 aaKnown RBP11.38□□□□□ -0.59
CPNE1-218ENST00000439806 IKZF4Q9H2S9 585 aa11.38□□□□□ -0.59
CPNE1-218ENST00000439806 DMAC2Q9NW81 257 aa11.38□□□□□ -0.59
CPNE1-218ENST00000439806 RNF14Q9UBS8 474 aa11.38□□□□□ -0.59
CPNE1-218ENST00000439806 SALL4Q9UJQ4 1053 aa11.38□□□□□ -0.59
CPNE1-218ENST00000439806 DNAJC12Q9UKB3 198 aa11.38□□□□□ -0.59
CPNE1-218ENST00000439806 RLFQ13129 1914 aa11.38□□□□□ -0.59
CPNE1-218ENST00000439806 WDR64B1ANS9 1081 aa11.37□□□□□ -0.59
CPNE1-218ENST00000439806 VWA5AO00534 786 aa11.37□□□□□ -0.59
CPNE1-218ENST00000439806 DKC1O60832 514 aaKnown RBP eCLIP11.37□□□□□ -0.59
CPNE1-218ENST00000439806 GFPT2O94808 682 aa11.37□□□□□ -0.59
CPNE1-218ENST00000439806 TRIM49P0CI25 452 aa11.37□□□□□ -0.59
CPNE1-218ENST00000439806 TRIM49CP0CI26 452 aa11.37□□□□□ -0.59
CPNE1-218ENST00000439806 YWHABP31946 246 aaKnown RBP11.37□□□□□ -0.59
CPNE1-218ENST00000439806 SOX5P35711 763 aa11.37□□□□□ -0.59
CPNE1-218ENST00000439806 NOP2P46087 812 aaKnown RBP11.37□□□□□ -0.59
CPNE1-218ENST00000439806 BACE1P56817 501 aa11.37□□□□□ -0.59
CPNE1-218ENST00000439806 BFSP1Q12934 665 aa11.37□□□□□ -0.59
CPNE1-218ENST00000439806 CASP8Q14790 479 aa11.37□□□□□ -0.59
CPNE1-218ENST00000439806 TERF2Q15554 542 aa11.37□□□□□ -0.59
CPNE1-218ENST00000439806 XKR9Q5GH70 373 aa11.37□□□□□ -0.59
CPNE1-218ENST00000439806 GJB7Q6PEY0 223 aa11.37□□□□□ -0.59
CPNE1-218ENST00000439806 C4orf19Q8IY42 314 aa11.37□□□□□ -0.59
CPNE1-218ENST00000439806 DAW1Q8N136 415 aa11.37□□□□□ -0.59
CPNE1-218ENST00000439806 MSL3Q8N5Y2 521 aaKnown RBP11.37□□□□□ -0.59
CPNE1-218ENST00000439806 ZNF280CQ8ND82 737 aa11.37□□□□□ -0.59
CPNE1-218ENST00000439806 SLC17A8Q8NDX2 589 aa11.37□□□□□ -0.59
CPNE1-218ENST00000439806 RDM1Q8NG50 284 aa11.37□□□□□ -0.59
CPNE1-218ENST00000439806 WRNIP1Q96S55 665 aa11.37□□□□□ -0.59
CPNE1-218ENST00000439806 IWS1Q96ST2 819 aa11.37□□□□□ -0.59
CPNE1-218ENST00000439806 PSMB7Q99436 277 aa11.37□□□□□ -0.59
CPNE1-218ENST00000439806 STRA6Q9BX79 667 aa11.37□□□□□ -0.59
CPNE1-218ENST00000439806 TLR10Q9BXR5 811 aa11.37□□□□□ -0.59
CPNE1-218ENST00000439806 PACSIN1Q9BY11 444 aa11.37□□□□□ -0.59
CPNE1-218ENST00000439806 UBXN6Q9BZV1 441 aa11.37□□□□□ -0.59
CPNE1-218ENST00000439806 ANKEF1Q9NU02 776 aa11.37□□□□□ -0.59
CPNE1-218ENST00000439806 TMOD4Q9NZQ9 345 aa11.37□□□□□ -0.59
CPNE1-218ENST00000439806 AJAP1Q9UKB5 411 aaPredicted RBP11.37□□□□□ -0.59
CPNE1-218ENST00000439806 L1RE1Q9UN81 338 aa11.37□□□□□ -0.59
CPNE1-218ENST00000439806 EXOC7Q9UPT5 735 aa11.37□□□□□ -0.59
CPNE1-218ENST00000439806 MYH9P35579 1960 aaKnown RBP11.36□□□□□ -0.59
CPNE1-218ENST00000439806 C19orf81C9J6K1 198 aa11.36□□□□□ -0.59
CPNE1-218ENST00000439806 FZD9O00144 591 aa11.36□□□□□ -0.59
CPNE1-218ENST00000439806 BACH1O14867 736 aa11.36□□□□□ -0.59
CPNE1-218ENST00000439806 FTCDO95954 541 aa11.36□□□□□ -0.59
CPNE1-218ENST00000439806 H2AFZP0C0S5 128 aa11.36□□□□□ -0.59
CPNE1-218ENST00000439806 PTPRAP18433 802 aa11.36□□□□□ -0.59
CPNE1-218ENST00000439806 LMNB1P20700 586 aa11.36□□□□□ -0.59
CPNE1-218ENST00000439806 RFX1P22670 979 aa11.36□□□□□ -0.59
CPNE1-218ENST00000439806 CXCR5P32302 372 aa11.36□□□□□ -0.59
CPNE1-218ENST00000439806 DSG3P32926 999 aa11.36□□□□□ -0.59
CPNE1-218ENST00000439806 MATR3P43243 847 aaKnown RBP eCLIP11.36□□□□□ -0.59
CPNE1-218ENST00000439806 OAZ1P54368 228 aa11.36□□□□□ -0.59
CPNE1-218ENST00000439806 SNRPFP62306 86 aaKnown RBP11.36□□□□□ -0.59
CPNE1-218ENST00000439806 CETN1Q12798 172 aa11.36□□□□□ -0.59
CPNE1-218ENST00000439806 BAATQ14032 418 aaPredicted RBP11.36□□□□□ -0.59
CPNE1-218ENST00000439806 DRAP1Q14919 205 aaPredicted RBP11.36□□□□□ -0.59
CPNE1-218ENST00000439806 UGCGQ16739 394 aa11.36□□□□□ -0.59
CPNE1-218ENST00000439806 CFAP221Q4G0U5 840 aa11.36□□□□□ -0.59
CPNE1-218ENST00000439806 MEI1Q5TIA1 1274 aa11.36□□□□□ -0.59
CPNE1-218ENST00000439806 SNRNP48Q6IEG0 339 aaKnown RBP11.36□□□□□ -0.59
CPNE1-218ENST00000439806 ALKBH5Q6P6C2 394 aaKnown RBP11.36□□□□□ -0.59
CPNE1-218ENST00000439806 H2AFVQ71UI9 128 aa11.36□□□□□ -0.59
CPNE1-218ENST00000439806 INTS8Q75QN2 995 aaKnown RBP11.36□□□□□ -0.59
CPNE1-218ENST00000439806 C12orf56Q8IXR9 622 aa11.36□□□□□ -0.59
CPNE1-218ENST00000439806 SPATA4Q8NEY3 305 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 536.6 ms