RNA–Protein interactions for RNA: ENST00000429427.1

SSR4P1-202, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

TSL 5 BASIC

Gene SSR4P1, Length 967 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-202ENST00000429427 ZSWIM4Q9H7M6 989 aa20.26■□□□□ 0.83
SSR4P1-202ENST00000429427 RGS18Q9NS28 235 aa20.26■□□□□ 0.83
SSR4P1-202ENST00000429427 BMP2KQ9NSY1 1161 aaPredicted RBP20.26■□□□□ 0.83
SSR4P1-202ENST00000429427 TTC28Q96AY4 2481 aa20.26■□□□□ 0.83
SSR4P1-202ENST00000429427 A0A087WWV3 80 aa20.25■□□□□ 0.83
SSR4P1-202ENST00000429427 GPR182O15218 404 aa20.25■□□□□ 0.83
SSR4P1-202ENST00000429427 LYPLA2O95372 231 aa20.25■□□□□ 0.83
SSR4P1-202ENST00000429427 SPATA31C1P0DKV0 1188 aa20.25■□□□□ 0.83
SSR4P1-202ENST00000429427 GJB2P29033 226 aa20.25■□□□□ 0.83
SSR4P1-202ENST00000429427 SARSP49591 514 aaKnown RBP20.25■□□□□ 0.83
SSR4P1-202ENST00000429427 TPH2Q8IWU9 490 aa20.25■□□□□ 0.83
SSR4P1-202ENST00000429427 IL27Q8NEV9 243 aa20.25■□□□□ 0.83
SSR4P1-202ENST00000429427 XPNPEP1Q9NQW7 623 aa20.25■□□□□ 0.83
SSR4P1-202ENST00000429427 SUCLA2Q9P2R7 463 aaPredicted RBP20.25■□□□□ 0.83
SSR4P1-202ENST00000429427 A0A087WZ62 844 aa20.24■□□□□ 0.83
SSR4P1-202ENST00000429427 OR52Z1P0C646 297 aa20.24■□□□□ 0.83
SSR4P1-202ENST00000429427 TMEM192Q8IY95 271 aa20.24■□□□□ 0.83
SSR4P1-202ENST00000429427 FBXO22Q8NEZ5 403 aa20.24■□□□□ 0.83
SSR4P1-202ENST00000429427 NLRP7Q8WX94 980 aa20.24■□□□□ 0.83
SSR4P1-202ENST00000429427 CLP1Q92989 425 aaKnown RBP20.24■□□□□ 0.83
SSR4P1-202ENST00000429427 TMEM143Q96AN5 459 aa20.24■□□□□ 0.83
SSR4P1-202ENST00000429427 FDXACB1Q9BRP7 624 aaPredicted RBP20.24■□□□□ 0.83
SSR4P1-202ENST00000429427 MRPL42Q9Y6G3 142 aaKnown RBP20.24■□□□□ 0.83
SSR4P1-202ENST00000429427 NLRC5Q86WI3 1866 aa20.24■□□□□ 0.83
SSR4P1-202ENST00000429427 DENND3A2RUS2 1198 aa20.23■□□□□ 0.83
SSR4P1-202ENST00000429427 DKC1O60832 514 aaKnown RBP eCLIP20.23■□□□□ 0.83
SSR4P1-202ENST00000429427 MED24O75448 989 aa20.23■□□□□ 0.83
SSR4P1-202ENST00000429427 IBSPP21815 317 aaPredicted RBP20.23■□□□□ 0.83
SSR4P1-202ENST00000429427 TRAPPC10P48553 1259 aa20.23■□□□□ 0.83
SSR4P1-202ENST00000429427 MCM2P49736 904 aa20.23■□□□□ 0.83
SSR4P1-202ENST00000429427 FAM189BP81408 668 aa20.23■□□□□ 0.83
SSR4P1-202ENST00000429427 ORC2Q13416 577 aaPredicted RBP20.23■□□□□ 0.83
SSR4P1-202ENST00000429427 SLC24A5Q71RS6 500 aa20.23■□□□□ 0.83
SSR4P1-202ENST00000429427 RHPN2Q8IUC4 686 aa20.23■□□□□ 0.83
SSR4P1-202ENST00000429427 ZNF710Q8N1W2 664 aa20.23■□□□□ 0.83
SSR4P1-202ENST00000429427 FIBCD1Q8N539 461 aa20.23■□□□□ 0.83
SSR4P1-202ENST00000429427 IFT122Q9HBG6 1241 aa20.23■□□□□ 0.83
SSR4P1-202ENST00000429427 RNF19AQ9NV58 838 aa20.23■□□□□ 0.83
SSR4P1-202ENST00000429427 PCDHB6Q9Y5E3 794 aa20.23■□□□□ 0.83
SSR4P1-202ENST00000429427 GTF3C3Q9Y5Q9 886 aa20.23■□□□□ 0.83
SSR4P1-202ENST00000429427 RFC5P40937 340 aa20.22■□□□□ 0.83
SSR4P1-202ENST00000429427 TECP42680 631 aa20.22■□□□□ 0.83
SSR4P1-202ENST00000429427 POLGP54098 1239 aaPredicted RBP20.22■□□□□ 0.83
SSR4P1-202ENST00000429427 GNL2Q13823 731 aaKnown RBP20.22■□□□□ 0.83
SSR4P1-202ENST00000429427 BTG3Q14201 252 aaPredicted RBP20.22■□□□□ 0.83
SSR4P1-202ENST00000429427 EMC2Q15006 297 aa20.22■□□□□ 0.83
SSR4P1-202ENST00000429427 XKR9Q5GH70 373 aa20.22■□□□□ 0.83
SSR4P1-202ENST00000429427 FAM102BQ5T8I3 360 aa20.22■□□□□ 0.83
SSR4P1-202ENST00000429427 NEK9Q8TD19 979 aa20.22■□□□□ 0.83
SSR4P1-202ENST00000429427 PIGOQ8TEQ8 1089 aa20.22■□□□□ 0.83
SSR4P1-202ENST00000429427 PRPF31Q8WWY3 499 aaKnown RBP20.22■□□□□ 0.83
SSR4P1-202ENST00000429427 SLC7A3Q8WY07 619 aa20.22■□□□□ 0.83
SSR4P1-202ENST00000429427 C1orf112Q9NSG2 853 aa20.22■□□□□ 0.83
SSR4P1-202ENST00000429427 HCSTQ9UBK5 93 aa20.22■□□□□ 0.83
SSR4P1-202ENST00000429427 PPME1Q9Y570 386 aa20.22■□□□□ 0.83
SSR4P1-202ENST00000429427 RALGAPA2Q2PPJ7 1873 aa20.22■□□□□ 0.83
SSR4P1-202ENST00000429427 KIAA1671Q9BY89 1806 aa20.21■□□□□ 0.83
SSR4P1-202ENST00000429427 C5orf67F2Z3F1 127 aa20.21■□□□□ 0.83
SSR4P1-202ENST00000429427 H3BNC9 293 aa20.21■□□□□ 0.83
SSR4P1-202ENST00000429427 GTPBP6O43824 516 aaPredicted RBP20.21■□□□□ 0.83
SSR4P1-202ENST00000429427 RARRES1P49788 294 aa20.21■□□□□ 0.83
SSR4P1-202ENST00000429427 DNM2P50570 870 aa20.21■□□□□ 0.83
SSR4P1-202ENST00000429427 CUL4AQ13619 759 aa20.21■□□□□ 0.83
SSR4P1-202ENST00000429427 PAN2Q504Q3 1202 aaKnown RBP20.21■□□□□ 0.83
SSR4P1-202ENST00000429427 ZNF410Q86VK4 478 aa20.21■□□□□ 0.83
SSR4P1-202ENST00000429427 CATSPER3Q86XQ3 398 aa20.21■□□□□ 0.83
SSR4P1-202ENST00000429427 CMTR2Q8IYT2 770 aaKnown RBP20.21■□□□□ 0.83
SSR4P1-202ENST00000429427 NLRP4Q96MN2 994 aa20.21■□□□□ 0.83
SSR4P1-202ENST00000429427 SCLT1Q96NL6 688 aa20.21■□□□□ 0.83
SSR4P1-202ENST00000429427 SAMD11Q96NU1 681 aa20.21■□□□□ 0.83
SSR4P1-202ENST00000429427 MINDY3Q9H8M7 445 aa20.21■□□□□ 0.83
SSR4P1-202ENST00000429427 COL4A3BPQ9Y5P4 624 aa20.21■□□□□ 0.83
SSR4P1-202ENST00000429427 MUC3AQ02505 3323 aa20.21■□□□□ 0.83
SSR4P1-202ENST00000429427 BRWD1Q9NSI6 2320 aa20.21■□□□□ 0.83
SSR4P1-202ENST00000429427 STAG3L1P0CL83 205 aa20.2■□□□□ 0.82
SSR4P1-202ENST00000429427 FGFR1P11362 822 aa20.2■□□□□ 0.82
SSR4P1-202ENST00000429427 ATF7P17544 494 aaPredicted RBP20.2■□□□□ 0.82
SSR4P1-202ENST00000429427 CTNNB1P35222 781 aa20.2■□□□□ 0.82
SSR4P1-202ENST00000429427 BMPR1AP36894 532 aa20.2■□□□□ 0.82
SSR4P1-202ENST00000429427 IL17AQ16552 155 aa20.2■□□□□ 0.82
SSR4P1-202ENST00000429427 ODR4Q5SWX8 454 aa20.2■□□□□ 0.82
SSR4P1-202ENST00000429427 FAM43BQ6ZT52 329 aaPredicted RBP20.2■□□□□ 0.82
SSR4P1-202ENST00000429427 OTUD6AQ7L8S5 288 aa20.2■□□□□ 0.82
SSR4P1-202ENST00000429427 GCOM2Q9BZD3 368 aaPredicted RBP20.2■□□□□ 0.82
SSR4P1-202ENST00000429427 ANKEF1Q9NU02 776 aa20.2■□□□□ 0.82
SSR4P1-202ENST00000429427 LMCD1Q9NZU5 365 aa20.2■□□□□ 0.82
SSR4P1-202ENST00000429427 ATG2AQ2TAZ0 1938 aa20.19■□□□□ 0.82
SSR4P1-202ENST00000429427 LAMTOR4Q0VGL1 99 aa20.19■□□□□ 0.82
SSR4P1-202ENST00000429427 PTGDRQ13258 359 aa20.19■□□□□ 0.82
SSR4P1-202ENST00000429427 GPM6BQ13491 265 aa20.19■□□□□ 0.82
SSR4P1-202ENST00000429427 ECM1Q16610 540 aa20.19■□□□□ 0.82
SSR4P1-202ENST00000429427 POTEGQ6S5H5 508 aa20.19■□□□□ 0.82
SSR4P1-202ENST00000429427 ZNF598Q86UK7 904 aaKnown RBP20.19■□□□□ 0.82
SSR4P1-202ENST00000429427 ASAP3Q8TDY4 903 aa20.19■□□□□ 0.82
SSR4P1-202ENST00000429427 JPH2Q9BR39 696 aaPredicted RBP20.19■□□□□ 0.82
SSR4P1-202ENST00000429427 POLR3CQ9BUI4 534 aaPredicted RBP20.19■□□□□ 0.82
SSR4P1-202ENST00000429427 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.19■□□□□ 0.82
SSR4P1-202ENST00000429427 TMEM161AQ9NX61 479 aa20.19■□□□□ 0.82
SSR4P1-202ENST00000429427 NOL7Q9UMY1 257 aaKnown RBP20.19■□□□□ 0.82
SSR4P1-202ENST00000429427 SMC3Q9UQE7 1217 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms