RNA–Protein interactions for RNA: ENST00000420692.6

CTSB-203, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 2,230 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-203ENST00000420692 GFPT2O94808 682 aa17.64■□□□□ 0.42
CTSB-203ENST00000420692 RARRES1P49788 294 aa17.64■□□□□ 0.42
CTSB-203ENST00000420692 C10orf76Q5T2E6 689 aa17.64■□□□□ 0.42
CTSB-203ENST00000420692 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.64■□□□□ 0.42
CTSB-203ENST00000420692 HS2ST1Q7LGA3 356 aa17.64■□□□□ 0.42
CTSB-203ENST00000420692 ZSWIM2Q8NEG5 633 aa17.64■□□□□ 0.42
CTSB-203ENST00000420692 SLC30A5Q8TAD4 765 aa17.64■□□□□ 0.42
CTSB-203ENST00000420692 LNX1Q8TBB1 728 aaPredicted RBP17.64■□□□□ 0.42
CTSB-203ENST00000420692 SYT11Q9BT88 431 aa17.64■□□□□ 0.42
CTSB-203ENST00000420692 PARP14Q460N5 1801 aa17.64■□□□□ 0.41
CTSB-203ENST00000420692 ERICH4A6NGS2 130 aa17.64■□□□□ 0.41
CTSB-203ENST00000420692 VCAM1P19320 739 aa17.64■□□□□ 0.41
CTSB-203ENST00000420692 EIF2AK2P19525 551 aaKnown RBP17.64■□□□□ 0.41
CTSB-203ENST00000420692 CCDC181Q5TID7 509 aa17.64■□□□□ 0.41
CTSB-203ENST00000420692 MCF2L2Q86YR7 1114 aa17.64■□□□□ 0.41
CTSB-203ENST00000420692 LMO3Q8TAP4 145 aa17.64■□□□□ 0.41
CTSB-203ENST00000420692 VPS18Q9P253 973 aa17.64■□□□□ 0.41
CTSB-203ENST00000420692 PPP1R9AQ9ULJ8 1098 aa17.64■□□□□ 0.41
CTSB-203ENST00000420692 F8VZ95 297 aa17.63■□□□□ 0.41
CTSB-203ENST00000420692 AGPSO00116 658 aa17.63■□□□□ 0.41
CTSB-203ENST00000420692 EVI5O60447 810 aa17.63■□□□□ 0.41
CTSB-203ENST00000420692 PAFAH1B1P43034 410 aa17.63■□□□□ 0.41
CTSB-203ENST00000420692 TNNT3P45378 269 aaPredicted RBP17.63■□□□□ 0.41
CTSB-203ENST00000420692 DLG4P78352 724 aa17.63■□□□□ 0.41
CTSB-203ENST00000420692 MTMR2Q13614 643 aa17.63■□□□□ 0.41
CTSB-203ENST00000420692 PGM5Q15124 567 aa17.63■□□□□ 0.41
CTSB-203ENST00000420692 MAP9Q49MG5 647 aa17.63■□□□□ 0.41
CTSB-203ENST00000420692 CFAP221Q4G0U5 840 aa17.63■□□□□ 0.41
CTSB-203ENST00000420692 SAMD7Q7Z3H4 446 aa17.63■□□□□ 0.41
CTSB-203ENST00000420692 RDH13Q8NBN7 331 aa17.63■□□□□ 0.41
CTSB-203ENST00000420692 STK33Q9BYT3 514 aa17.63■□□□□ 0.41
CTSB-203ENST00000420692 DBR1Q9UK59 544 aaKnown RBP17.63■□□□□ 0.41
CTSB-203ENST00000420692 CTNND1O60716 968 aaKnown RBP17.63■□□□□ 0.41
CTSB-203ENST00000420692 LRRN2O75325 713 aa17.63■□□□□ 0.41
CTSB-203ENST00000420692 FLOT1O75955 427 aa17.63■□□□□ 0.41
CTSB-203ENST00000420692 MTMR1Q13613 665 aa17.63■□□□□ 0.41
CTSB-203ENST00000420692 DRAP1Q14919 205 aaPredicted RBP17.63■□□□□ 0.41
CTSB-203ENST00000420692 DNAJC12Q9UKB3 198 aa17.63■□□□□ 0.41
CTSB-203ENST00000420692 RIPK3Q9Y572 518 aa17.63■□□□□ 0.41
CTSB-203ENST00000420692 RLFQ13129 1914 aa17.63■□□□□ 0.41
CTSB-203ENST00000420692 PHACTR2O75167 634 aa17.62■□□□□ 0.41
CTSB-203ENST00000420692 LYPLA2O95372 231 aa17.62■□□□□ 0.41
CTSB-203ENST00000420692 CCNE2O96020 404 aa17.62■□□□□ 0.41
CTSB-203ENST00000420692 SOX5P35711 763 aa17.62■□□□□ 0.41
CTSB-203ENST00000420692 QARSP47897 775 aaKnown RBP17.62■□□□□ 0.41
CTSB-203ENST00000420692 PPP2R5AQ15172 486 aa17.62■□□□□ 0.41
CTSB-203ENST00000420692 C1orf220Q5T0J3 134 aa17.62■□□□□ 0.41
CTSB-203ENST00000420692 NBPF12Q5TAG4 269 aaPredicted RBP17.62■□□□□ 0.41
CTSB-203ENST00000420692 PHLDB3Q6NSJ2 640 aa17.62■□□□□ 0.41
CTSB-203ENST00000420692 STXBP4Q6ZWJ1 553 aa17.62■□□□□ 0.41
CTSB-203ENST00000420692 TPCN2Q8NHX9 752 aa17.62■□□□□ 0.41
CTSB-203ENST00000420692 SLC16A10Q8TF71 515 aa17.62■□□□□ 0.41
CTSB-203ENST00000420692 RIN2Q8WYP3 895 aaPredicted RBP17.62■□□□□ 0.41
CTSB-203ENST00000420692 CCDC102AQ96A19 550 aa17.62■□□□□ 0.41
CTSB-203ENST00000420692 EXOC4Q96A65 974 aa17.62■□□□□ 0.41
CTSB-203ENST00000420692 INTS2Q9H0H0 1204 aaKnown RBP17.62■□□□□ 0.41
CTSB-203ENST00000420692 TAOK3Q9H2K8 898 aa17.62■□□□□ 0.41
CTSB-203ENST00000420692 PCIF1Q9H4Z3 704 aa17.62■□□□□ 0.41
CTSB-203ENST00000420692 STIM2Q9P246 746 aa17.62■□□□□ 0.41
CTSB-203ENST00000420692 RNF14Q9UBS8 474 aa17.62■□□□□ 0.41
CTSB-203ENST00000420692 FRMD4BQ9Y2L6 1034 aa17.62■□□□□ 0.41
CTSB-203ENST00000420692 BRCA1P38398 1863 aaKnown RBP17.62■□□□□ 0.41
CTSB-203ENST00000420692 K7ENM7 598 aa17.62■□□□□ 0.41
CTSB-203ENST00000420692 EXOC3O60645 756 aa17.62■□□□□ 0.41
CTSB-203ENST00000420692 GLI1P08151 1106 aa17.62■□□□□ 0.41
CTSB-203ENST00000420692 FERP16591 822 aa17.62■□□□□ 0.41
CTSB-203ENST00000420692 ANXA13P27216 316 aa17.62■□□□□ 0.41
CTSB-203ENST00000420692 STAT1P42224 750 aa17.62■□□□□ 0.41
CTSB-203ENST00000420692 BFSP1Q12934 665 aa17.62■□□□□ 0.41
CTSB-203ENST00000420692 GPS2Q13227 327 aa17.62■□□□□ 0.41
CTSB-203ENST00000420692 SYCP3Q8IZU3 236 aa17.62■□□□□ 0.41
CTSB-203ENST00000420692 FAM71BQ8TC56 605 aa17.62■□□□□ 0.41
CTSB-203ENST00000420692 RPAP3Q9H6T3 665 aaPredicted RBP17.62■□□□□ 0.41
CTSB-203ENST00000420692 GPRC5CQ9NQ84 441 aa17.62■□□□□ 0.41
CTSB-203ENST00000420692 BCS1LQ9Y276 419 aa17.62■□□□□ 0.41
CTSB-203ENST00000420692 WDR81Q562E7 1941 aa17.61■□□□□ 0.41
CTSB-203ENST00000420692 PPP1R12BO60237 982 aaPredicted RBP17.61■□□□□ 0.41
CTSB-203ENST00000420692 RNASE9P60153 205 aaKnown RBP17.61■□□□□ 0.41
CTSB-203ENST00000420692 PTPROQ16827 1216 aa17.61■□□□□ 0.41
CTSB-203ENST00000420692 SLFN11Q7Z7L1 901 aa17.61■□□□□ 0.41
CTSB-203ENST00000420692 PLEKHO2Q8TD55 490 aa17.61■□□□□ 0.41
CTSB-203ENST00000420692 U2AF1L4Q8WU68 220 aaKnown RBP17.61■□□□□ 0.41
CTSB-203ENST00000420692 JDP2Q8WYK2 163 aa17.61■□□□□ 0.41
CTSB-203ENST00000420692 PDCD2LQ9BRP1 358 aa17.61■□□□□ 0.41
CTSB-203ENST00000420692 CBWD1Q9BRT8 395 aa17.61■□□□□ 0.41
CTSB-203ENST00000420692 TMEM59LQ9UK28 342 aa17.61■□□□□ 0.41
CTSB-203ENST00000420692 BACH1O14867 736 aa17.6■□□□□ 0.41
CTSB-203ENST00000420692 KIF4AO95239 1232 aa17.6■□□□□ 0.41
CTSB-203ENST00000420692 MYCLP12524 364 aaPredicted RBP17.6■□□□□ 0.41
CTSB-203ENST00000420692 PLS3P13797 630 aa17.6■□□□□ 0.41
CTSB-203ENST00000420692 YWHABP31946 246 aaKnown RBP17.6■□□□□ 0.41
CTSB-203ENST00000420692 MYBPC2Q14324 1141 aa17.6■□□□□ 0.41
CTSB-203ENST00000420692 DALRD3Q5D0E6 543 aaKnown RBP17.6■□□□□ 0.41
CTSB-203ENST00000420692 GOLGA5Q8TBA6 731 aa17.6■□□□□ 0.41
CTSB-203ENST00000420692 TMEM174Q8WUU8 243 aa17.6■□□□□ 0.41
CTSB-203ENST00000420692 RUBCNQ92622 972 aa17.6■□□□□ 0.41
CTSB-203ENST00000420692 ATG4CQ96DT6 458 aa17.6■□□□□ 0.41
CTSB-203ENST00000420692 TRERF1Q96PN7 1200 aa17.6■□□□□ 0.41
CTSB-203ENST00000420692 PXMP2Q9NR77 195 aa17.6■□□□□ 0.41
CTSB-203ENST00000420692 PSD3Q9NYI0 1048 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms