RNA–Protein interactions for RNA: ENST00000418600.6

SYNGAP1-202, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 5,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-202ENST00000418600 ERCC6LQ2NKX8 1250 aa18.27■□□□□ 0.51
SYNGAP1-202ENST00000418600 DEFB118Q96PH6 123 aa18.27■□□□□ 0.51
SYNGAP1-202ENST00000418600 UTP11Q9Y3A2 253 aaKnown RBP18.27■□□□□ 0.51
SYNGAP1-202ENST00000418600 POTEMA6NI47 508 aa18.27■□□□□ 0.51
SYNGAP1-202ENST00000418600 MYL1P05976 194 aa18.27■□□□□ 0.51
SYNGAP1-202ENST00000418600 IVLP07476 585 aa18.27■□□□□ 0.51
SYNGAP1-202ENST00000418600 HOXA7P31268 230 aaPredicted RBP18.27■□□□□ 0.51
SYNGAP1-202ENST00000418600 CCDC157Q569K6 752 aa18.27■□□□□ 0.51
SYNGAP1-202ENST00000418600 TMC7Q7Z402 723 aa18.27■□□□□ 0.51
SYNGAP1-202ENST00000418600 POTEDQ86YR6 584 aa18.27■□□□□ 0.51
SYNGAP1-202ENST00000418600 TMEM143Q96AN5 459 aa18.27■□□□□ 0.51
SYNGAP1-202ENST00000418600 TRIM56Q9BRZ2 755 aaKnown RBP18.27■□□□□ 0.51
SYNGAP1-202ENST00000418600 MTA3Q9BTC8 594 aa18.27■□□□□ 0.51
SYNGAP1-202ENST00000418600 AMFRQ9UKV5 643 aa18.27■□□□□ 0.51
SYNGAP1-202ENST00000418600 TBKBP1A7MCY6 615 aa18.26■□□□□ 0.51
SYNGAP1-202ENST00000418600 HOXC6P09630 235 aa18.26■□□□□ 0.51
SYNGAP1-202ENST00000418600 DSG3P32926 999 aa18.26■□□□□ 0.51
SYNGAP1-202ENST00000418600 IKBKEQ14164 716 aa18.26■□□□□ 0.51
SYNGAP1-202ENST00000418600 EMC2Q15006 297 aa18.26■□□□□ 0.51
SYNGAP1-202ENST00000418600 CD99L2Q8TCZ2 262 aa18.26■□□□□ 0.51
SYNGAP1-202ENST00000418600 GPRASP2Q96D09 838 aa18.26■□□□□ 0.51
SYNGAP1-202ENST00000418600 RASA1P20936 1047 aa18.26■□□□□ 0.51
SYNGAP1-202ENST00000418600 KIAA1755Q5JYT7 1200 aa18.26■□□□□ 0.51
SYNGAP1-202ENST00000418600 TLK2Q86UE8 772 aa18.26■□□□□ 0.51
SYNGAP1-202ENST00000418600 STAG2Q8N3U4 1231 aa18.26■□□□□ 0.51
SYNGAP1-202ENST00000418600 IFT81Q8WYA0 676 aa18.26■□□□□ 0.51
SYNGAP1-202ENST00000418600 USP28Q96RU2 1077 aa18.26■□□□□ 0.51
SYNGAP1-202ENST00000418600 LY9Q9HBG7 655 aa18.26■□□□□ 0.51
SYNGAP1-202ENST00000418600 VWDEQ8N2E2 1590 aa18.26■□□□□ 0.51
SYNGAP1-202ENST00000418600 FANCCQ00597 558 aa18.26■□□□□ 0.51
SYNGAP1-202ENST00000418600 NSUN7Q8NE18 718 aaKnown RBP18.26■□□□□ 0.51
SYNGAP1-202ENST00000418600 UBR1Q8IWV7 1749 aa18.26■□□□□ 0.51
SYNGAP1-202ENST00000418600 HMGB1P1B2RPK0 211 aaPredicted RBP18.26■□□□□ 0.51
SYNGAP1-202ENST00000418600 ACTN4O43707 911 aaKnown RBP18.26■□□□□ 0.51
SYNGAP1-202ENST00000418600 PPARGP37231 505 aaPredicted RBP18.26■□□□□ 0.51
SYNGAP1-202ENST00000418600 ZNF484Q5JVG2 852 aa18.26■□□□□ 0.51
SYNGAP1-202ENST00000418600 LGSNQ5TDP6 509 aa18.26■□□□□ 0.51
SYNGAP1-202ENST00000418600 KAZNQ674X7 775 aa18.26■□□□□ 0.51
SYNGAP1-202ENST00000418600 RAB23Q9ULC3 237 aa18.26■□□□□ 0.51
SYNGAP1-202ENST00000418600 IPPQ9Y573 584 aa18.26■□□□□ 0.51
SYNGAP1-202ENST00000418600 CD4P01730 458 aa18.25■□□□□ 0.51
SYNGAP1-202ENST00000418600 MAN1A1P33908 653 aa18.25■□□□□ 0.51
SYNGAP1-202ENST00000418600 CCDC105Q8IYK2 499 aa18.25■□□□□ 0.51
SYNGAP1-202ENST00000418600 ACER1Q8TDN7 264 aa18.25■□□□□ 0.51
SYNGAP1-202ENST00000418600 TNIP3Q96KP6 325 aa18.25■□□□□ 0.51
SYNGAP1-202ENST00000418600 ZNF512Q96ME7 567 aaPredicted RBP18.25■□□□□ 0.51
SYNGAP1-202ENST00000418600 PPP1R9AQ9ULJ8 1098 aa18.25■□□□□ 0.51
SYNGAP1-202ENST00000418600 ZC3H4Q9UPT8 1303 aaKnown RBP18.25■□□□□ 0.51
SYNGAP1-202ENST00000418600 PRKCEQ02156 737 aa18.25■□□□□ 0.51
SYNGAP1-202ENST00000418600 ARL6IP4Q66PJ3 421 aaKnown RBP18.25■□□□□ 0.51
SYNGAP1-202ENST00000418600 TUFT1Q9NNX1 390 aa18.25■□□□□ 0.51
SYNGAP1-202ENST00000418600 TUBE1Q9UJT0 475 aa18.25■□□□□ 0.51
SYNGAP1-202ENST00000418600 AMPD2Q01433 879 aa18.25■□□□□ 0.51
SYNGAP1-202ENST00000418600 NFIAQ12857 509 aa18.25■□□□□ 0.51
SYNGAP1-202ENST00000418600 DACT2Q5SW24 774 aa18.25■□□□□ 0.51
SYNGAP1-202ENST00000418600 CNOT6LQ96LI5 555 aaKnown RBP18.25■□□□□ 0.51
SYNGAP1-202ENST00000418600 P2RX7Q99572 595 aaKnown RBP18.25■□□□□ 0.51
SYNGAP1-202ENST00000418600 PRG3Q9Y2Y8 225 aaPredicted RBP18.25■□□□□ 0.51
SYNGAP1-202ENST00000418600 WDR19Q8NEZ3 1342 aa18.25■□□□□ 0.51
SYNGAP1-202ENST00000418600 TRIML1Q8N9V2 468 aa18.25■□□□□ 0.51
SYNGAP1-202ENST00000418600 ZC3H11AO75152 810 aaKnown RBP eCLIP18.25■□□□□ 0.51
SYNGAP1-202ENST00000418600 NPTXRO95502 500 aa18.25■□□□□ 0.51
SYNGAP1-202ENST00000418600 PDIA6Q15084 440 aa18.25■□□□□ 0.51
SYNGAP1-202ENST00000418600 DHTKD1Q96HY7 919 aaPredicted RBP18.25■□□□□ 0.51
SYNGAP1-202ENST00000418600 PPLO60437 1756 aa18.24■□□□□ 0.51
SYNGAP1-202ENST00000418600 PPP4CP60510 307 aa18.24■□□□□ 0.51
SYNGAP1-202ENST00000418600 INTS8Q75QN2 995 aaKnown RBP18.24■□□□□ 0.51
SYNGAP1-202ENST00000418600 TIPINQ9BVW5 301 aa18.24■□□□□ 0.51
SYNGAP1-202ENST00000418600 SPZ1Q9BXG8 430 aa18.24■□□□□ 0.51
SYNGAP1-202ENST00000418600 CEMIPQ8WUJ3 1361 aa18.24■□□□□ 0.51
SYNGAP1-202ENST00000418600 DGAT1O75907 488 aa18.24■□□□□ 0.51
SYNGAP1-202ENST00000418600 AP3M2P53677 418 aa18.24■□□□□ 0.51
SYNGAP1-202ENST00000418600 RPS6P62753 249 aaKnown RBP18.24■□□□□ 0.51
SYNGAP1-202ENST00000418600 SETDB1Q15047 1291 aa18.24■□□□□ 0.51
SYNGAP1-202ENST00000418600 FSCN1Q16658 493 aaKnown RBP18.24■□□□□ 0.51
SYNGAP1-202ENST00000418600 ADAT2Q7Z6V5 191 aaKnown RBP18.24■□□□□ 0.51
SYNGAP1-202ENST00000418600 APBA2Q99767 749 aa18.24■□□□□ 0.51
SYNGAP1-202ENST00000418600 TJP2Q9UDY2 1190 aa18.24■□□□□ 0.51
SYNGAP1-202ENST00000418600 CA4P22748 312 aa18.24■□□□□ 0.51
SYNGAP1-202ENST00000418600 CACNB2Q08289 660 aaPredicted RBP18.24■□□□□ 0.51
SYNGAP1-202ENST00000418600 FSTL1Q12841 308 aa18.24■□□□□ 0.51
SYNGAP1-202ENST00000418600 RAD54LQ92698 747 aa18.24■□□□□ 0.51
SYNGAP1-202ENST00000418600 MXRA8Q9BRK3 442 aa18.24■□□□□ 0.51
SYNGAP1-202ENST00000418600 EHD4Q9H223 541 aa18.24■□□□□ 0.51
SYNGAP1-202ENST00000418600 KIAA1210Q9ULL0 1709 aa18.24■□□□□ 0.51
SYNGAP1-202ENST00000418600 GTF2F1P35269 517 aaKnown RBP eCLIP18.24■□□□□ 0.511e-6■■■■□ 26.1
SYNGAP1-202ENST00000418600 TMEM132BQ14DG7 1078 aa18.24■□□□□ 0.51
SYNGAP1-202ENST00000418600 SV2CQ496J9 727 aa18.24■□□□□ 0.51
SYNGAP1-202ENST00000418600 TOGARAM2Q6ZUX3 1019 aa18.24■□□□□ 0.51
SYNGAP1-202ENST00000418600 KCTD6Q8NC69 237 aa18.24■□□□□ 0.51
SYNGAP1-202ENST00000418600 GCNT4Q9P109 453 aa18.24■□□□□ 0.51
SYNGAP1-202ENST00000418600 ZNF541Q9H0D2 1346 aa18.23■□□□□ 0.51
SYNGAP1-202ENST00000418600 P2RX5Q93086 422 aa18.23■□□□□ 0.51
SYNGAP1-202ENST00000418600 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.23■□□□□ 0.51
SYNGAP1-202ENST00000418600 MED1Q15648 1581 aaPredicted RBP18.23■□□□□ 0.51
SYNGAP1-202ENST00000418600 CEP104O60308 925 aa18.23■□□□□ 0.51
SYNGAP1-202ENST00000418600 VAV2P52735 878 aa18.23■□□□□ 0.51
SYNGAP1-202ENST00000418600 DCAF4L1Q3SXM0 396 aa18.23■□□□□ 0.51
SYNGAP1-202ENST00000418600 ERICH1Q86X53 443 aa18.23■□□□□ 0.51
SYNGAP1-202ENST00000418600 GPD1LQ8N335 351 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms