RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 DAAM1Q9Y4D1 1078 aa13.8□□□□□ -0.2
HERC3-203ENST00000407637 ZCCHC18P0CG32 403 aa13.8□□□□□ -0.2
HERC3-203ENST00000407637 LONRF1Q17RB8 773 aa13.8□□□□□ -0.2
HERC3-203ENST00000407637 Q4G0T1 1027 aa13.8□□□□□ -0.2
HERC3-203ENST00000407637 KHDC1Q4VXA5 237 aaKnown RBP13.8□□□□□ -0.2
HERC3-203ENST00000407637 DNAJC14Q6Y2X3 702 aaPredicted RBP13.8□□□□□ -0.2
HERC3-203ENST00000407637 CEP128Q6ZU80 1094 aa13.8□□□□□ -0.2
HERC3-203ENST00000407637 ZNF365Q70YC5 407 aa13.8□□□□□ -0.2
HERC3-203ENST00000407637 TPCN2Q8NHX9 752 aa13.8□□□□□ -0.2
HERC3-203ENST00000407637 SYN2Q92777 582 aaPredicted RBP13.8□□□□□ -0.2
HERC3-203ENST00000407637 SLC7A6OSQ96CW6 309 aaPredicted RBP13.8□□□□□ -0.2
HERC3-203ENST00000407637 NAP1L3Q99457 506 aaPredicted RBP13.8□□□□□ -0.2
HERC3-203ENST00000407637 SLX1AQ9BQ83 275 aa13.8□□□□□ -0.2
HERC3-203ENST00000407637 ERVK-5Q9HDB9 667 aa13.8□□□□□ -0.2
HERC3-203ENST00000407637 ETNK2Q9NVF9 386 aa13.8□□□□□ -0.2
HERC3-203ENST00000407637 RTCBQ9Y3I0 505 aaKnown RBP13.8□□□□□ -0.2
HERC3-203ENST00000407637 BZW2Q9Y6E2 419 aaKnown RBP13.8□□□□□ -0.2
HERC3-203ENST00000407637 VEGFAP15692 232 aaPredicted RBP13.79□□□□□ -0.2
HERC3-203ENST00000407637 PRPF4BQ13523 1007 aaKnown RBP13.79□□□□□ -0.2
HERC3-203ENST00000407637 RASGRP4Q8TDF6 673 aa13.79□□□□□ -0.2
HERC3-203ENST00000407637 INPP5DQ92835 1189 aa13.79□□□□□ -0.2
HERC3-203ENST00000407637 ARHGEF2Q92974 986 aaKnown RBP13.79□□□□□ -0.2
HERC3-203ENST00000407637 SEC63Q9UGP8 760 aaKnown RBP13.79□□□□□ -0.2
HERC3-203ENST00000407637 CHKBQ9Y259 395 aa13.79□□□□□ -0.2
HERC3-203ENST00000407637 SLC4A7Q9Y6M7 1214 aa13.79□□□□□ -0.2
HERC3-203ENST00000407637 USH1CQ9Y6N9 552 aa13.79□□□□□ -0.2
HERC3-203ENST00000407637 KIF1AQ12756 1690 aa13.79□□□□□ -0.2
HERC3-203ENST00000407637 GSG1L2A8MUP6 293 aa13.79□□□□□ -0.2
HERC3-203ENST00000407637 CBX6O95503 412 aa13.79□□□□□ -0.2
HERC3-203ENST00000407637 PTENP60484 403 aa13.79□□□□□ -0.2
HERC3-203ENST00000407637 OCRLQ01968 901 aa13.79□□□□□ -0.2
HERC3-203ENST00000407637 SETDB1Q15047 1291 aa13.79□□□□□ -0.2
HERC3-203ENST00000407637 MTFR1Q15390 333 aa13.79□□□□□ -0.2
HERC3-203ENST00000407637 SEC23AQ15436 765 aa13.79□□□□□ -0.2
HERC3-203ENST00000407637 ASIC2Q16515 512 aa13.79□□□□□ -0.2
HERC3-203ENST00000407637 CERKLQ49MI3 558 aaPredicted RBP13.79□□□□□ -0.2
HERC3-203ENST00000407637 BTNL9Q6UXG8 535 aa13.79□□□□□ -0.2
HERC3-203ENST00000407637 TOM1L2Q6ZVM7 507 aa13.79□□□□□ -0.2
HERC3-203ENST00000407637 CNOT7Q9UIV1 285 aaKnown RBP13.79□□□□□ -0.2
HERC3-203ENST00000407637 FAM205AQ6ZU69 1335 aa13.79□□□□□ -0.2
HERC3-203ENST00000407637 PALM3A6NDB9 673 aaPredicted RBP13.78□□□□□ -0.2
HERC3-203ENST00000407637 BTNL10A8MVZ5 291 aa13.78□□□□□ -0.2
HERC3-203ENST00000407637 RIPK2O43353 540 aa13.78□□□□□ -0.2
HERC3-203ENST00000407637 ATP5HO75947 161 aa13.78□□□□□ -0.2
HERC3-203ENST00000407637 POLGP54098 1239 aaPredicted RBP13.78□□□□□ -0.2
HERC3-203ENST00000407637 LSAMPQ13449 338 aa13.78□□□□□ -0.2
HERC3-203ENST00000407637 ACVR2BQ13705 512 aa13.78□□□□□ -0.2
HERC3-203ENST00000407637 MPP2Q14168 576 aa13.78□□□□□ -0.2
HERC3-203ENST00000407637 CNNM4Q6P4Q7 775 aa13.78□□□□□ -0.2
HERC3-203ENST00000407637 LRRC55Q6ZSA7 311 aa13.78□□□□□ -0.2
HERC3-203ENST00000407637 SEPT14Q6ZU15 432 aa13.78□□□□□ -0.2
HERC3-203ENST00000407637 JAMLQ86YT9 394 aa13.78□□□□□ -0.2
HERC3-203ENST00000407637 ARHGAP18Q8N392 663 aa13.78□□□□□ -0.2
HERC3-203ENST00000407637 FBXO41Q8TF61 875 aa13.78□□□□□ -0.2
HERC3-203ENST00000407637 IWS1Q96ST2 819 aa13.78□□□□□ -0.2
HERC3-203ENST00000407637 TSPYL2Q9H2G4 693 aaPredicted RBP13.78□□□□□ -0.2
HERC3-203ENST00000407637 DHX36Q9H2U1 1008 aaKnown RBP13.78□□□□□ -0.2
HERC3-203ENST00000407637 AIPL1Q9NZN9 384 aa13.78□□□□□ -0.2
HERC3-203ENST00000407637 GMEB1Q9Y692 573 aa13.78□□□□□ -0.2
HERC3-203ENST00000407637 CNTNAP5Q8WYK1 1306 aa13.78□□□□□ -0.2
HERC3-203ENST00000407637 RIC1Q4ADV7 1423 aa13.78□□□□□ -0.2
HERC3-203ENST00000407637 KIAA0391O15091 583 aaKnown RBP13.78□□□□□ -0.2
HERC3-203ENST00000407637 KRT36O76013 467 aa13.78□□□□□ -0.2
HERC3-203ENST00000407637 LMNAP02545 664 aaKnown RBP13.78□□□□□ -0.2
HERC3-203ENST00000407637 PPP1R2P41236 205 aa13.78□□□□□ -0.2
HERC3-203ENST00000407637 MPP3Q13368 585 aa13.78□□□□□ -0.2
HERC3-203ENST00000407637 KIAA1755Q5JYT7 1200 aa13.78□□□□□ -0.2
HERC3-203ENST00000407637 LRRC74BQ6ZQY2 392 aa13.78□□□□□ -0.2
HERC3-203ENST00000407637 CROCCP2Q86T23 111 aa13.78□□□□□ -0.2
HERC3-203ENST00000407637 TMEM109Q9BVC6 243 aa13.78□□□□□ -0.2
HERC3-203ENST00000407637 KANSL2Q9H9L4 492 aa13.78□□□□□ -0.2
HERC3-203ENST00000407637 FLT1P17948 1338 aa13.78□□□□□ -0.2
HERC3-203ENST00000407637 ADAMTS7Q9UKP4 1686 aa13.78□□□□□ -0.2
HERC3-203ENST00000407637 SMIM22K7EJ46 135 aa13.77□□□□□ -0.2
HERC3-203ENST00000407637 ECE2O60344 883 aa13.77□□□□□ -0.2
HERC3-203ENST00000407637 ZNF189O75820 626 aaPredicted RBP13.77□□□□□ -0.2
HERC3-203ENST00000407637 T-ENOLP0DO92 83 aa13.77□□□□□ -0.2
HERC3-203ENST00000407637 EIF4BP23588 611 aaKnown RBP13.77□□□□□ -0.2
HERC3-203ENST00000407637 RXRBP28702 533 aa13.77□□□□□ -0.2
HERC3-203ENST00000407637 STX2P32856 288 aa13.77□□□□□ -0.2
HERC3-203ENST00000407637 CD151P48509 253 aa13.77□□□□□ -0.2
HERC3-203ENST00000407637 RTP1P59025 263 aa13.77□□□□□ -0.2
HERC3-203ENST00000407637 PTK2Q05397 1052 aa13.77□□□□□ -0.2
HERC3-203ENST00000407637 ADCY1Q08828 1119 aa13.77□□□□□ -0.2
HERC3-203ENST00000407637 MFSD5Q6N075 450 aa13.77□□□□□ -0.2
HERC3-203ENST00000407637 KBTBD2Q8IY47 623 aa13.77□□□□□ -0.2
HERC3-203ENST00000407637 ENAHQ8N8S7 591 aaPredicted RBP13.77□□□□□ -0.2
HERC3-203ENST00000407637 SH3TC2Q8TF17 1288 aa13.77□□□□□ -0.2
HERC3-203ENST00000407637 GRHL1Q9NZI5 618 aa13.77□□□□□ -0.2
HERC3-203ENST00000407637 STXBP5LQ9Y2K9 1186 aa13.77□□□□□ -0.2
HERC3-203ENST00000407637 PFASO15067 1338 aa13.77□□□□□ -0.2
HERC3-203ENST00000407637 ABCB11O95342 1321 aa13.77□□□□□ -0.2
HERC3-203ENST00000407637 NPHP3-ACAD11A0A0J9YXS1 232 aa13.77□□□□□ -0.21
HERC3-203ENST00000407637 SNRPA1P09661 255 aaKnown RBP13.77□□□□□ -0.21
HERC3-203ENST00000407637 GIT2Q14161 759 aa13.77□□□□□ -0.21
HERC3-203ENST00000407637 MAGEB6Q8N7X4 407 aa13.77□□□□□ -0.21
HERC3-203ENST00000407637 ESR2Q92731 530 aa13.77□□□□□ -0.21
HERC3-203ENST00000407637 CCDC97Q96F63 343 aaPredicted RBP13.77□□□□□ -0.21
HERC3-203ENST00000407637 HIC2Q96JB3 615 aa13.77□□□□□ -0.21
HERC3-203ENST00000407637 LRRC37BQ96QE4 947 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms