RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 MAPK6Q16659 721 aa15.2■□□□□ 0.02
SCAF4-202ENST00000399804 C10orf76Q5T2E6 689 aa15.2■□□□□ 0.02
SCAF4-202ENST00000399804 FBXO38Q6PIJ6 1188 aa15.2■□□□□ 0.02
SCAF4-202ENST00000399804 SPATA33Q96N06 139 aa15.2■□□□□ 0.02
SCAF4-202ENST00000399804 AGTPBP1Q9UPW5 1226 aa15.2■□□□□ 0.02
SCAF4-202ENST00000399804 PLS3P13797 630 aa15.2■□□□□ 0.02
SCAF4-202ENST00000399804 KCTD17Q8N5Z5 321 aa15.2■□□□□ 0.02
SCAF4-202ENST00000399804 INTS2Q9H0H0 1204 aaKnown RBP15.2■□□□□ 0.02
SCAF4-202ENST00000399804 SPC25Q9HBM1 224 aa15.2■□□□□ 0.02
SCAF4-202ENST00000399804 UCHL3P15374 230 aa15.19■□□□□ 0.02
SCAF4-202ENST00000399804 TTLL4Q14679 1199 aa15.19■□□□□ 0.02
SCAF4-202ENST00000399804 TMEM119Q4V9L6 283 aa15.19■□□□□ 0.02
SCAF4-202ENST00000399804 NYAP1Q6ZVC0 841 aa15.19■□□□□ 0.02
SCAF4-202ENST00000399804 OTOP1Q7RTM1 612 aa15.19■□□□□ 0.02
SCAF4-202ENST00000399804 FBXO41Q8TF61 875 aa15.19■□□□□ 0.02
SCAF4-202ENST00000399804 KRT12Q99456 494 aa15.19■□□□□ 0.02
SCAF4-202ENST00000399804 APOL6Q9BWW8 343 aa15.19■□□□□ 0.02
SCAF4-202ENST00000399804 EPC1Q9H2F5 836 aa15.19■□□□□ 0.02
SCAF4-202ENST00000399804 MYO1FO00160 1098 aa15.19■□□□□ 0.02
SCAF4-202ENST00000399804 PALMO75781 387 aa15.19■□□□□ 0.02
SCAF4-202ENST00000399804 P4HA1P13674 534 aa15.19■□□□□ 0.02
SCAF4-202ENST00000399804 CAPN2P17655 700 aa15.19■□□□□ 0.02
SCAF4-202ENST00000399804 GUCY2FP51841 1108 aa15.19■□□□□ 0.02
SCAF4-202ENST00000399804 YWHAEP62258 255 aaKnown RBP15.19■□□□□ 0.02
SCAF4-202ENST00000399804 PHLDB2Q86SQ0 1253 aa15.19■□□□□ 0.02
SCAF4-202ENST00000399804 NLRP7Q8WX94 980 aa15.19■□□□□ 0.02
SCAF4-202ENST00000399804 DUSP9Q99956 384 aaKnown RBP15.19■□□□□ 0.02
SCAF4-202ENST00000399804 GPRC5CQ9NQ84 441 aa15.19■□□□□ 0.02
SCAF4-202ENST00000399804 VWA5AO00534 786 aa15.19■□□□□ 0.02
SCAF4-202ENST00000399804 TXNP10599 105 aaKnown RBP15.19■□□□□ 0.02
SCAF4-202ENST00000399804 CD58P19256 250 aa15.19■□□□□ 0.02
SCAF4-202ENST00000399804 MRPS25P82663 173 aaKnown RBP15.19■□□□□ 0.02
SCAF4-202ENST00000399804 PRKCEQ02156 737 aa15.19■□□□□ 0.02
SCAF4-202ENST00000399804 C2orf54Q08AI8 447 aa15.19■□□□□ 0.02
SCAF4-202ENST00000399804 XRRA1Q6P2D8 792 aa15.19■□□□□ 0.02
SCAF4-202ENST00000399804 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.19■□□□□ 0.02
SCAF4-202ENST00000399804 MMTAG2Q9BU76 263 aaKnown RBP15.19■□□□□ 0.02
SCAF4-202ENST00000399804 FAM49AQ9H0Q0 323 aaPredicted RBP15.19■□□□□ 0.02
SCAF4-202ENST00000399804 ASIC3Q9UHC3 531 aa15.19■□□□□ 0.02
SCAF4-202ENST00000399804 SYNPO2Q9UMS6 1093 aa15.19■□□□□ 0.02
SCAF4-202ENST00000399804 M0QZ92 97 aa15.19■□□□□ 0.02
SCAF4-202ENST00000399804 ZBTB39O15060 712 aa15.19■□□□□ 0.02
SCAF4-202ENST00000399804 GUCY2DQ02846 1103 aa15.19■□□□□ 0.02
SCAF4-202ENST00000399804 Q3C1V9 767 aa15.19■□□□□ 0.02
SCAF4-202ENST00000399804 ZNF365Q70YC5 407 aa15.19■□□□□ 0.02
SCAF4-202ENST00000399804 CHST13Q8NET6 341 aa15.19■□□□□ 0.02
SCAF4-202ENST00000399804 RANBP17Q9H2T7 1088 aaKnown RBP15.19■□□□□ 0.02
SCAF4-202ENST00000399804 HSPBP1Q9NZL4 362 aa15.19■□□□□ 0.02
SCAF4-202ENST00000399804 TFR2Q9UP52 801 aa15.19■□□□□ 0.02
SCAF4-202ENST00000399804 GOLGA6BA6NDN3 693 aa15.18■□□□□ 0.02
SCAF4-202ENST00000399804 CLCN6P51797 869 aa15.18■□□□□ 0.02
SCAF4-202ENST00000399804 RHPN2Q8IUC4 686 aa15.18■□□□□ 0.02
SCAF4-202ENST00000399804 GLYCTKQ8IVS8 523 aa15.18■□□□□ 0.02
SCAF4-202ENST00000399804 REXO1L1PQ8IX06 675 aa15.18■□□□□ 0.02
SCAF4-202ENST00000399804 IGKV6D-41A0A0C4DH26 115 aa15.18■□□□□ 0.02
SCAF4-202ENST00000399804 THAP12O43422 761 aa15.18■□□□□ 0.02
SCAF4-202ENST00000399804 KLRC4O43908 158 aa15.18■□□□□ 0.02
SCAF4-202ENST00000399804 TBC1D12O60347 775 aa15.18■□□□□ 0.02
SCAF4-202ENST00000399804 SLITRK3O94933 977 aa15.18■□□□□ 0.02
SCAF4-202ENST00000399804 CASP4P49662 377 aa15.18■□□□□ 0.02
SCAF4-202ENST00000399804 YARSP54577 528 aaKnown RBP15.18■□□□□ 0.02
SCAF4-202ENST00000399804 ERVK-24P63145 666 aa15.18■□□□□ 0.02
SCAF4-202ENST00000399804 DGKZQ13574 1117 aa15.18■□□□□ 0.02
SCAF4-202ENST00000399804 KRT39Q6A163 491 aa15.18■□□□□ 0.02
SCAF4-202ENST00000399804 TCP11Q8WWU5 503 aa15.18■□□□□ 0.02
SCAF4-202ENST00000399804 BBXQ8WY36 941 aaPredicted RBP15.18■□□□□ 0.02
SCAF4-202ENST00000399804 SEPT1Q8WYJ6 367 aa15.18■□□□□ 0.02
SCAF4-202ENST00000399804 KIFC3Q9BVG8 833 aa15.18■□□□□ 0.02
SCAF4-202ENST00000399804 KCNMB3Q9NPA1 279 aa15.18■□□□□ 0.02
SCAF4-202ENST00000399804 SLC16A3O15427 465 aaKnown RBP15.18■□□□□ 0.02
SCAF4-202ENST00000399804 LDHAP00338 332 aaKnown RBP15.18■□□□□ 0.02
SCAF4-202ENST00000399804 FMO5P49326 533 aa15.18■□□□□ 0.02
SCAF4-202ENST00000399804 SLC35G1Q2M3R5 365 aa15.18■□□□□ 0.02
SCAF4-202ENST00000399804 MUM1L1Q5H9M0 696 aa15.18■□□□□ 0.02
SCAF4-202ENST00000399804 BTNL9Q6UXG8 535 aa15.18■□□□□ 0.02
SCAF4-202ENST00000399804 GPC2Q8N158 579 aa15.18■□□□□ 0.02
SCAF4-202ENST00000399804 GLIS3Q8NEA6 775 aa15.18■□□□□ 0.02
SCAF4-202ENST00000399804 GPRASP2Q96D09 838 aa15.18■□□□□ 0.02
SCAF4-202ENST00000399804 FHOD1Q9Y613 1164 aa15.18■□□□□ 0.02
SCAF4-202ENST00000399804 LMBRD2Q68DH5 695 aaPredicted RBP15.17■□□□□ 0.02
SCAF4-202ENST00000399804 ZNF746Q6NUN9 644 aaPredicted RBP15.17■□□□□ 0.02
SCAF4-202ENST00000399804 RNF169Q8NCN4 708 aa15.17■□□□□ 0.02
SCAF4-202ENST00000399804 SPATA20Q8TB22 786 aa15.17■□□□□ 0.02
SCAF4-202ENST00000399804 ANKRD36BP1Q96IX9 119 aa15.17■□□□□ 0.02
SCAF4-202ENST00000399804 KIAA1586Q9HCI6 787 aa15.17■□□□□ 0.02
SCAF4-202ENST00000399804 PXMP2Q9NR77 195 aa15.17■□□□□ 0.02
SCAF4-202ENST00000399804 EIF3DO15371 548 aaKnown RBP eCLIP15.17■□□□□ 0.02
SCAF4-202ENST00000399804 PTPRAP18433 802 aa15.17■□□□□ 0.02
SCAF4-202ENST00000399804 OAS2P29728 719 aaKnown RBP15.17■□□□□ 0.02
SCAF4-202ENST00000399804 ACTR2P61160 394 aa15.17■□□□□ 0.02
SCAF4-202ENST00000399804 PCNX4Q63HM2 1172 aa15.17■□□□□ 0.02
SCAF4-202ENST00000399804 ERO1BQ86YB8 467 aa15.17■□□□□ 0.02
SCAF4-202ENST00000399804 AP5M1Q9H0R1 490 aa15.17■□□□□ 0.02
SCAF4-202ENST00000399804 COL16A1Q07092 1604 aaPredicted RBP15.17■□□□□ 0.02
SCAF4-202ENST00000399804 PLEKP08567 350 aaPredicted RBP15.17■□□□□ 0.02
SCAF4-202ENST00000399804 BFSP1Q12934 665 aa15.17■□□□□ 0.02
SCAF4-202ENST00000399804 SESTD1Q86VW0 696 aa15.17■□□□□ 0.02
SCAF4-202ENST00000399804 TIPINQ9BVW5 301 aa15.17■□□□□ 0.02
SCAF4-202ENST00000399804 MAK16Q9BXY0 300 aaKnown RBP15.17■□□□□ 0.02
SCAF4-202ENST00000399804 DPH5Q9H2P9 285 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms