RNA–Protein interactions for RNA: ENST00000399042.4

BRCC3-206, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 954 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-206ENST00000399042 LMBR1Q8WVP7 490 aa9.9□□□□□ -0.82
BRCC3-206ENST00000399042 SMARCE1Q969G3 411 aa9.9□□□□□ -0.82
BRCC3-206ENST00000399042 TMEM143Q96AN5 459 aa9.9□□□□□ -0.82
BRCC3-206ENST00000399042 TIGD1Q96MW7 591 aa9.9□□□□□ -0.82
BRCC3-206ENST00000399042 RUSC1Q9BVN2 902 aa9.9□□□□□ -0.82
BRCC3-206ENST00000399042 TIPINQ9BVW5 301 aa9.9□□□□□ -0.82
BRCC3-206ENST00000399042 BLOC1S4Q9NUP1 217 aa9.9□□□□□ -0.82
BRCC3-206ENST00000399042 SUCLA2Q9P2R7 463 aaPredicted RBP9.9□□□□□ -0.82
BRCC3-206ENST00000399042 GINS2Q9Y248 185 aa9.9□□□□□ -0.82
BRCC3-206ENST00000399042 ATP11BQ9Y2G3 1177 aa9.9□□□□□ -0.82
BRCC3-206ENST00000399042 COL4A3BPQ9Y5P4 624 aa9.9□□□□□ -0.82
BRCC3-206ENST00000399042 LRRC37A2A6NM11 1700 aa9.9□□□□□ -0.83
BRCC3-206ENST00000399042 MROH7Q68CQ1 1323 aa9.89□□□□□ -0.83
BRCC3-206ENST00000399042 MYMKA6NI61 221 aa9.89□□□□□ -0.83
BRCC3-206ENST00000399042 CCDC169A6NNP5 214 aa9.89□□□□□ -0.83
BRCC3-206ENST00000399042 HAS3O00219 553 aa9.89□□□□□ -0.83
BRCC3-206ENST00000399042 GAS2O43903 313 aaKnown RBP9.89□□□□□ -0.83
BRCC3-206ENST00000399042 HIP1RO75146 1068 aa9.89□□□□□ -0.83
BRCC3-206ENST00000399042 MAFO75444 373 aaPredicted RBP9.89□□□□□ -0.83
BRCC3-206ENST00000399042 MYL1P05976 194 aa9.89□□□□□ -0.83
BRCC3-206ENST00000399042 THPOP40225 353 aa9.89□□□□□ -0.83
BRCC3-206ENST00000399042 CLCN3P51790 818 aa9.89□□□□□ -0.83
BRCC3-206ENST00000399042 SMTNP53814 917 aa9.89□□□□□ -0.83
BRCC3-206ENST00000399042 SOX10P56693 466 aa9.89□□□□□ -0.83
BRCC3-206ENST00000399042 ZNF200P98182 395 aaPredicted RBP9.89□□□□□ -0.83
BRCC3-206ENST00000399042 TFDP1Q14186 410 aa9.89□□□□□ -0.83
BRCC3-206ENST00000399042 E2F4Q16254 413 aa9.89□□□□□ -0.83
BRCC3-206ENST00000399042 TMEM132AQ24JP5 1023 aa9.89□□□□□ -0.83
BRCC3-206ENST00000399042 NAALADL2Q58DX5 795 aa9.89□□□□□ -0.83
BRCC3-206ENST00000399042 HERC4Q5GLZ8 1057 aaPredicted RBP9.89□□□□□ -0.83
BRCC3-206ENST00000399042 CCDC183Q5T5S1 534 aa9.89□□□□□ -0.83
BRCC3-206ENST00000399042 L1TD1Q5T7N2 865 aaKnown RBP9.89□□□□□ -0.83
BRCC3-206ENST00000399042 IER5Q5VY09 327 aa9.89□□□□□ -0.83
BRCC3-206ENST00000399042 TAF2Q6P1X5 1199 aa9.89□□□□□ -0.83
BRCC3-206ENST00000399042 SLC39A5Q6ZMH5 540 aa9.89□□□□□ -0.83
BRCC3-206ENST00000399042 RHPN2Q8IUC4 686 aa9.89□□□□□ -0.83
BRCC3-206ENST00000399042 CCDC155Q8N6L0 562 aa9.89□□□□□ -0.83
BRCC3-206ENST00000399042 ENGASEQ8NFI3 743 aa9.89□□□□□ -0.83
BRCC3-206ENST00000399042 DIS3LQ8TF46 1054 aaKnown RBP9.89□□□□□ -0.83
BRCC3-206ENST00000399042 PSPC1Q8WXF1 523 aaKnown RBP9.89□□□□□ -0.83
BRCC3-206ENST00000399042 DDX12PQ92771 950 aa9.89□□□□□ -0.83
BRCC3-206ENST00000399042 KIFAP3Q92845 792 aa9.89□□□□□ -0.83
BRCC3-206ENST00000399042 POLR3FQ9H1D9 316 aaPredicted RBP9.89□□□□□ -0.83
BRCC3-206ENST00000399042 CLSTN2Q9H4D0 955 aa9.89□□□□□ -0.83
BRCC3-206ENST00000399042 POLD4Q9HCU8 107 aa9.89□□□□□ -0.83
BRCC3-206ENST00000399042 EXOC1Q9NV70 894 aa9.89□□□□□ -0.83
BRCC3-206ENST00000399042 PANK4Q9NVE7 773 aa9.89□□□□□ -0.83
BRCC3-206ENST00000399042 RMND1Q9NWS8 449 aa9.89□□□□□ -0.83
BRCC3-206ENST00000399042 GTF2IRD1Q9UHL9 959 aa9.89□□□□□ -0.83
BRCC3-206ENST00000399042 KCNG1Q9UIX4 513 aa9.89□□□□□ -0.83
BRCC3-206ENST00000399042 LRRIQ4A6NIV6 560 aa9.88□□□□□ -0.83
BRCC3-206ENST00000399042 SFI1A8K8P3 1242 aa9.88□□□□□ -0.83
BRCC3-206ENST00000399042 TREHO43280 583 aa9.88□□□□□ -0.83
BRCC3-206ENST00000399042 STBD1O95210 358 aa9.88□□□□□ -0.83
BRCC3-206ENST00000399042 C22orf31O95567 290 aa9.88□□□□□ -0.83
BRCC3-206ENST00000399042 RPN1P04843 607 aaKnown RBP9.88□□□□□ -0.83
BRCC3-206ENST00000399042 SRGAP2CP0DJJ0 459 aa9.88□□□□□ -0.83
BRCC3-206ENST00000399042 GAP43P17677 238 aa9.88□□□□□ -0.83
BRCC3-206ENST00000399042 CASP1P29466 404 aa9.88□□□□□ -0.83
BRCC3-206ENST00000399042 CDC42EP1Q00587 391 aa9.88□□□□□ -0.83
BRCC3-206ENST00000399042 DMP1Q13316 513 aaPredicted RBP9.88□□□□□ -0.83
BRCC3-206ENST00000399042 PNOCQ13519 176 aa9.88□□□□□ -0.83
BRCC3-206ENST00000399042 CUL4BQ13620 913 aa9.88□□□□□ -0.83
BRCC3-206ENST00000399042 MXD4Q14582 209 aaPredicted RBP9.88□□□□□ -0.83
BRCC3-206ENST00000399042 PPP2R5AQ15172 486 aa9.88□□□□□ -0.83
BRCC3-206ENST00000399042 KLHL40Q2TBA0 621 aa9.88□□□□□ -0.83
BRCC3-206ENST00000399042 ODR4Q5SWX8 454 aa9.88□□□□□ -0.83
BRCC3-206ENST00000399042 GDF6Q6KF10 455 aaPredicted RBP9.88□□□□□ -0.83
BRCC3-206ENST00000399042 C1orf186Q6ZWK4 172 aa9.88□□□□□ -0.83
BRCC3-206ENST00000399042 DEPTORQ8TB45 409 aa9.88□□□□□ -0.83
BRCC3-206ENST00000399042 DNAJB3Q8WWF6 145 aa9.88□□□□□ -0.83
BRCC3-206ENST00000399042 NLRP7Q8WX94 980 aa9.88□□□□□ -0.83
BRCC3-206ENST00000399042 ZBTB10Q96DT7 871 aa9.88□□□□□ -0.83
BRCC3-206ENST00000399042 NLRP4Q96MN2 994 aa9.88□□□□□ -0.83
BRCC3-206ENST00000399042 PPP1R16BQ96T49 567 aa9.88□□□□□ -0.83
BRCC3-206ENST00000399042 C7orf25Q9BPX7 421 aa9.88□□□□□ -0.83
BRCC3-206ENST00000399042 REEP2Q9BRK0 252 aa9.88□□□□□ -0.83
BRCC3-206ENST00000399042 TRPV6Q9H1D0 765 aa9.88□□□□□ -0.83
BRCC3-206ENST00000399042 PARVGQ9HBI0 331 aa9.88□□□□□ -0.83
BRCC3-206ENST00000399042 GPRC5CQ9NQ84 441 aa9.88□□□□□ -0.83
BRCC3-206ENST00000399042 TRMT13Q9NUP7 481 aaKnown RBP9.88□□□□□ -0.83
BRCC3-206ENST00000399042 KBTBD4Q9NVX7 518 aa9.88□□□□□ -0.83
BRCC3-206ENST00000399042 LARSQ9P2J5 1176 aaKnown RBP9.88□□□□□ -0.83
BRCC3-206ENST00000399042 PRKAG2Q9UGJ0 569 aa9.88□□□□□ -0.83
BRCC3-206ENST00000399042 ODF2LQ9ULJ1 636 aa9.88□□□□□ -0.83
BRCC3-206ENST00000399042 PCDHA2Q9Y5H9 948 aa9.88□□□□□ -0.83
BRCC3-206ENST00000399042 MYH15Q9Y2K3 1946 aa9.88□□□□□ -0.83
BRCC3-206ENST00000399042 C2orf72A6NCS6 295 aa9.87□□□□□ -0.83
BRCC3-206ENST00000399042 TULP1O00294 542 aaPredicted RBP9.87□□□□□ -0.83
BRCC3-206ENST00000399042 ASAP2O43150 1006 aa9.87□□□□□ -0.83
BRCC3-206ENST00000399042 LETM1O95202 739 aaPredicted RBP9.87□□□□□ -0.83
BRCC3-206ENST00000399042 RPLP2P05387 115 aaKnown RBP9.87□□□□□ -0.83
BRCC3-206ENST00000399042 CTSHP09668 335 aa9.87□□□□□ -0.83
BRCC3-206ENST00000399042 GUCY2CP25092 1073 aa9.87□□□□□ -0.83
BRCC3-206ENST00000399042 PEX3P56589 373 aa9.87□□□□□ -0.83
BRCC3-206ENST00000399042 RTP1P59025 263 aa9.87□□□□□ -0.83
BRCC3-206ENST00000399042 PLCB2Q00722 1185 aa9.87□□□□□ -0.83
BRCC3-206ENST00000399042 NCBP1Q09161 790 aaKnown RBP9.87□□□□□ -0.83
BRCC3-206ENST00000399042 TMEM62Q0P6H9 643 aa9.87□□□□□ -0.83
BRCC3-206ENST00000399042 BFSP2Q13515 415 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms