RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 YWHABP31946 246 aaKnown RBP9.89□□□□□ -0.83
TDP1-202ENST00000393452 SFNP31947 248 aa9.89□□□□□ -0.83
TDP1-202ENST00000393452 KRT76Q01546 638 aa9.89□□□□□ -0.83
TDP1-202ENST00000393452 ARID5AQ03989 594 aa9.89□□□□□ -0.83
TDP1-202ENST00000393452 ANGEL2Q5VTE6 544 aaKnown RBP9.89□□□□□ -0.83
TDP1-202ENST00000393452 NSMFQ6X4W1 530 aa9.89□□□□□ -0.83
TDP1-202ENST00000393452 ZNF571Q7Z3V5 609 aaPredicted RBP9.89□□□□□ -0.83
TDP1-202ENST00000393452 C12orf56Q8IXR9 622 aa9.89□□□□□ -0.83
TDP1-202ENST00000393452 ANKRD13CQ8N6S4 541 aa9.89□□□□□ -0.83
TDP1-202ENST00000393452 RDM1Q8NG50 284 aa9.89□□□□□ -0.83
TDP1-202ENST00000393452 OSBPL9Q96SU4 736 aa9.89□□□□□ -0.83
TDP1-202ENST00000393452 RNF146Q9NTX7 359 aa9.89□□□□□ -0.83
TDP1-202ENST00000393452 ZNF214Q9UL59 606 aaPredicted RBP9.89□□□□□ -0.83
TDP1-202ENST00000393452 L1RE1Q9UN81 338 aa9.89□□□□□ -0.83
TDP1-202ENST00000393452 HYOU1Q9Y4L1 999 aa9.89□□□□□ -0.83
TDP1-202ENST00000393452 SAMM50Q9Y512 469 aa9.89□□□□□ -0.83
TDP1-202ENST00000393452 PCDHGC5Q9Y5F6 944 aa9.89□□□□□ -0.83
TDP1-202ENST00000393452 POLR2AP24928 1970 aaKnown RBP9.89□□□□□ -0.83
TDP1-202ENST00000393452 DICER1Q9UPY3 1922 aaKnown RBP9.88□□□□□ -0.83
TDP1-202ENST00000393452 WDR64B1ANS9 1081 aa9.88□□□□□ -0.83
TDP1-202ENST00000393452 K7ENM7 598 aa9.88□□□□□ -0.83
TDP1-202ENST00000393452 MAFGO15525 162 aa9.88□□□□□ -0.83
TDP1-202ENST00000393452 MYCLP12524 364 aaPredicted RBP9.88□□□□□ -0.83
TDP1-202ENST00000393452 PLS3P13797 630 aa9.88□□□□□ -0.83
TDP1-202ENST00000393452 KLRC1P26715 233 aa9.88□□□□□ -0.83
TDP1-202ENST00000393452 DSG3P32926 999 aa9.88□□□□□ -0.83
TDP1-202ENST00000393452 PSMC5P62195 406 aa9.88□□□□□ -0.83
TDP1-202ENST00000393452 BAATQ14032 418 aaPredicted RBP9.88□□□□□ -0.83
TDP1-202ENST00000393452 UGCGQ16739 394 aa9.88□□□□□ -0.83
TDP1-202ENST00000393452 VSIG10LQ86VR7 867 aa9.88□□□□□ -0.83
TDP1-202ENST00000393452 COG1Q8WTW3 980 aa9.88□□□□□ -0.83
TDP1-202ENST00000393452 GPRASP2Q96D09 838 aa9.88□□□□□ -0.83
TDP1-202ENST00000393452 KLRG1Q96E93 195 aa9.88□□□□□ -0.83
TDP1-202ENST00000393452 CAPZA3Q96KX2 299 aa9.88□□□□□ -0.83
TDP1-202ENST00000393452 INPP4AQ96PE3 977 aaPredicted RBP9.88□□□□□ -0.83
TDP1-202ENST00000393452 SENP7Q9BQF6 1050 aa9.88□□□□□ -0.83
TDP1-202ENST00000393452 MAF1Q9H063 256 aa9.88□□□□□ -0.83
TDP1-202ENST00000393452 TMEM206Q9H813 350 aa9.88□□□□□ -0.83
TDP1-202ENST00000393452 ABCB6Q9NP58 842 aa9.88□□□□□ -0.83
TDP1-202ENST00000393452 PICK1Q9NRD5 415 aa9.88□□□□□ -0.83
TDP1-202ENST00000393452 TSKSQ9UJT2 592 aa9.88□□□□□ -0.83
TDP1-202ENST00000393452 AJAP1Q9UKB5 411 aaPredicted RBP9.88□□□□□ -0.83
TDP1-202ENST00000393452 DAAM1Q9Y4D1 1078 aa9.88□□□□□ -0.83
TDP1-202ENST00000393452 CYP2J2P51589 502 aa9.88□□□□□ -0.83
TDP1-202ENST00000393452 HMGCS2P54868 508 aa9.88□□□□□ -0.83
TDP1-202ENST00000393452 MCCD1P59942 119 aaPredicted RBP9.88□□□□□ -0.83
TDP1-202ENST00000393452 GTF2BQ00403 316 aa9.88□□□□□ -0.83
TDP1-202ENST00000393452 KIAA0753Q2KHM9 967 aa9.88□□□□□ -0.83
TDP1-202ENST00000393452 ARHGEF16Q5VV41 709 aa9.88□□□□□ -0.83
TDP1-202ENST00000393452 IQCEQ6IPM2 695 aa9.88□□□□□ -0.83
TDP1-202ENST00000393452 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.88□□□□□ -0.83
TDP1-202ENST00000393452 ANKEF1Q9NU02 776 aa9.88□□□□□ -0.83
TDP1-202ENST00000393452 SSC5DA1L4H1 1573 aa9.87□□□□□ -0.83
TDP1-202ENST00000393452 BUB1O43683 1085 aa9.87□□□□□ -0.83
TDP1-202ENST00000393452 NR3C2P08235 984 aa9.87□□□□□ -0.83
TDP1-202ENST00000393452 CCND2P30279 289 aa9.87□□□□□ -0.83
TDP1-202ENST00000393452 SNRPFP62306 86 aaKnown RBP9.87□□□□□ -0.83
TDP1-202ENST00000393452 BFSP1Q12934 665 aa9.87□□□□□ -0.83
TDP1-202ENST00000393452 CBWD6Q4V339 395 aa9.87□□□□□ -0.83
TDP1-202ENST00000393452 CBWD3Q5JTY5 395 aa9.87□□□□□ -0.83
TDP1-202ENST00000393452 CBWD5Q5RIA9 395 aa9.87□□□□□ -0.83
TDP1-202ENST00000393452 NOL9Q5SY16 702 aaKnown RBP9.87□□□□□ -0.83
TDP1-202ENST00000393452 ZNF746Q6NUN9 644 aaPredicted RBP9.87□□□□□ -0.83
TDP1-202ENST00000393452 NFRKBQ6P4R8 1299 aa9.87□□□□□ -0.83
TDP1-202ENST00000393452 SYCP3Q8IZU3 236 aa9.87□□□□□ -0.83
TDP1-202ENST00000393452 MMGT1Q8N4V1 131 aa9.87□□□□□ -0.83
TDP1-202ENST00000393452 OLIG1Q8TAK6 271 aa9.87□□□□□ -0.83
TDP1-202ENST00000393452 TRPM4Q8TD43 1214 aa9.87□□□□□ -0.83
TDP1-202ENST00000393452 DRC1Q96MC2 740 aa9.87□□□□□ -0.83
TDP1-202ENST00000393452 PACSIN1Q9BY11 444 aa9.87□□□□□ -0.83
TDP1-202ENST00000393452 STK33Q9BYT3 514 aa9.87□□□□□ -0.83
TDP1-202ENST00000393452 GPRC5DQ9NZD1 345 aa9.87□□□□□ -0.83
TDP1-202ENST00000393452 NAGPAQ9UK23 515 aa9.87□□□□□ -0.83
TDP1-202ENST00000393452 PPP2R3BQ9Y5P8 575 aa9.87□□□□□ -0.83
TDP1-202ENST00000393452 LOC285556D6RIA3 1793 aa9.87□□□□□ -0.83
TDP1-202ENST00000393452 TESPA1A2RU30 521 aaPredicted RBP9.87□□□□□ -0.83
TDP1-202ENST00000393452 BACH1O14867 736 aa9.87□□□□□ -0.83
TDP1-202ENST00000393452 MAPK13O15264 365 aa9.87□□□□□ -0.83
TDP1-202ENST00000393452 EXOC3O60645 756 aa9.87□□□□□ -0.83
TDP1-202ENST00000393452 GFPT2O94808 682 aa9.87□□□□□ -0.83
TDP1-202ENST00000393452 FERP16591 822 aa9.87□□□□□ -0.83
TDP1-202ENST00000393452 MCM3P25205 808 aa9.87□□□□□ -0.83
TDP1-202ENST00000393452 NCKAP1LP55160 1127 aa9.87□□□□□ -0.83
TDP1-202ENST00000393452 PRAMEF18Q5VWM3 479 aa9.87□□□□□ -0.83
TDP1-202ENST00000393452 SNRNP48Q6IEG0 339 aaKnown RBP9.87□□□□□ -0.83
TDP1-202ENST00000393452 GJB7Q6PEY0 223 aa9.87□□□□□ -0.83
TDP1-202ENST00000393452 CATSPERGQ6ZRH7 1159 aa9.87□□□□□ -0.83
TDP1-202ENST00000393452 HDXQ7Z353 690 aa9.87□□□□□ -0.83
TDP1-202ENST00000393452 HAUS6Q7Z4H7 955 aa9.87□□□□□ -0.83
TDP1-202ENST00000393452 SLC17A8Q8NDX2 589 aa9.87□□□□□ -0.83
TDP1-202ENST00000393452 LMO3Q8TAP4 145 aa9.87□□□□□ -0.83
TDP1-202ENST00000393452 CAGE1Q8TC20 777 aa9.87□□□□□ -0.83
TDP1-202ENST00000393452 ACCSQ96QU6 501 aa9.87□□□□□ -0.83
TDP1-202ENST00000393452 MOV10L1Q9BXT6 1211 aaKnown RBP9.87□□□□□ -0.83
TDP1-202ENST00000393452 PRDM10Q9NQV6 1147 aa9.87□□□□□ -0.83
TDP1-202ENST00000393452 ST7Q9NRC1 585 aa9.87□□□□□ -0.83
TDP1-202ENST00000393452 LCTP09848 1927 aa9.87□□□□□ -0.83
TDP1-202ENST00000393452 ARID2Q68CP9 1835 aa9.86□□□□□ -0.83
TDP1-202ENST00000393452 PTPRFP10586 1907 aa9.86□□□□□ -0.83
TDP1-202ENST00000393452 F8VZ95 297 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms