RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 E2F7Q96AV8 911 aa5.03□□□□□ -1.6
TRAV40-201ENST00000390467 SORCS2Q96PQ0 1159 aa5.03□□□□□ -1.6
TRAV40-201ENST00000390467 MSL2Q9HCI7 577 aa5.03□□□□□ -1.6
TRAV40-201ENST00000390467 TLR9Q9NR96 1032 aa5.03□□□□□ -1.6
TRAV40-201ENST00000390467 OXSMQ9NWU1 459 aa5.03□□□□□ -1.6
TRAV40-201ENST00000390467 SAE1Q9UBE0 346 aaPredicted RBP5.03□□□□□ -1.6
TRAV40-201ENST00000390467 VWA7Q9Y334 891 aa5.03□□□□□ -1.6
TRAV40-201ENST00000390467 C2orf78A6NCI8 922 aa5.02□□□□□ -1.61
TRAV40-201ENST00000390467 ZNF891A8MT65 544 aaPredicted RBP5.02□□□□□ -1.61
TRAV40-201ENST00000390467 KPNA6O60684 536 aa5.02□□□□□ -1.61
TRAV40-201ENST00000390467 FZD7O75084 574 aa5.02□□□□□ -1.61
TRAV40-201ENST00000390467 C1SP09871 688 aa5.02□□□□□ -1.61
TRAV40-201ENST00000390467 ATP2A2P16615 1042 aaKnown RBP5.02□□□□□ -1.61
TRAV40-201ENST00000390467 ACRV1P26436 265 aa5.02□□□□□ -1.61
TRAV40-201ENST00000390467 GDF5P43026 501 aa5.02□□□□□ -1.61
TRAV40-201ENST00000390467 RANGAP1P46060 587 aaPredicted RBP5.02□□□□□ -1.61
TRAV40-201ENST00000390467 KLF10Q13118 480 aa5.02□□□□□ -1.61
TRAV40-201ENST00000390467 FOXE3Q13461 319 aa5.02□□□□□ -1.61
TRAV40-201ENST00000390467 TTC38Q5R3I4 469 aa5.02□□□□□ -1.61
TRAV40-201ENST00000390467 SPTY2D1Q68D10 685 aaPredicted RBP5.02□□□□□ -1.61
TRAV40-201ENST00000390467 ZNF503Q96F45 646 aa5.02□□□□□ -1.61
TRAV40-201ENST00000390467 FAM89AQ96GI7 184 aa5.02□□□□□ -1.61
TRAV40-201ENST00000390467 GPHA2Q96T91 129 aa5.02□□□□□ -1.61
TRAV40-201ENST00000390467 HAPLN2Q9GZV7 340 aa5.02□□□□□ -1.61
TRAV40-201ENST00000390467 NELFAQ9H3P2 528 aa5.02□□□□□ -1.61
TRAV40-201ENST00000390467 MAGEC2Q9UBF1 373 aaPredicted RBP5.02□□□□□ -1.61
TRAV40-201ENST00000390467 ING1Q9UK53 422 aaPredicted RBP5.02□□□□□ -1.61
TRAV40-201ENST00000390467 DENND2AQ9ULE3 1009 aa5.02□□□□□ -1.61
TRAV40-201ENST00000390467 HS3ST3A1Q9Y663 406 aa5.02□□□□□ -1.61
TRAV40-201ENST00000390467 PMS2P1A4D2B8 440 aa5.01□□□□□ -1.61
TRAV40-201ENST00000390467 NPIPB8E9PQR5 432 aa5.01□□□□□ -1.61
TRAV40-201ENST00000390467 CYP17A1P05093 508 aa5.01□□□□□ -1.61
TRAV40-201ENST00000390467 ADCY7P51828 1080 aa5.01□□□□□ -1.61
TRAV40-201ENST00000390467 DSG1Q02413 1049 aa5.01□□□□□ -1.61
TRAV40-201ENST00000390467 ZNF174Q15697 407 aa5.01□□□□□ -1.61
TRAV40-201ENST00000390467 DGKDQ16760 1214 aa5.01□□□□□ -1.61
TRAV40-201ENST00000390467 UBE2R2Q712K3 238 aaPredicted RBP5.01□□□□□ -1.61
TRAV40-201ENST00000390467 NXPE1Q8N323 547 aa5.01□□□□□ -1.61
TRAV40-201ENST00000390467 D2HGDHQ8N465 521 aa5.01□□□□□ -1.61
TRAV40-201ENST00000390467 CACTINQ8WUQ7 758 aaKnown RBP5.01□□□□□ -1.61
TRAV40-201ENST00000390467 RABGGTAQ92696 567 aa5.01□□□□□ -1.61
TRAV40-201ENST00000390467 SLC7A6OSQ96CW6 309 aaPredicted RBP5.01□□□□□ -1.61
TRAV40-201ENST00000390467 TUBGCP5Q96RT8 1024 aa5.01□□□□□ -1.61
TRAV40-201ENST00000390467 ORAI3Q9BRQ5 295 aa5.01□□□□□ -1.61
TRAV40-201ENST00000390467 ZNF341Q9BYN7 854 aa5.01□□□□□ -1.61
TRAV40-201ENST00000390467 MTFR1LQ9H019 292 aa5.01□□□□□ -1.61
TRAV40-201ENST00000390467 ZMAT4Q9H898 229 aa5.01□□□□□ -1.61
TRAV40-201ENST00000390467 INTS7Q9NVH2 962 aaKnown RBP5.01□□□□□ -1.61
TRAV40-201ENST00000390467 POLR3BQ9NW08 1133 aaPredicted RBP5.01□□□□□ -1.61
TRAV40-201ENST00000390467 KCMF1Q9P0J7 381 aa5.01□□□□□ -1.61
TRAV40-201ENST00000390467 DNAI1Q9UI46 699 aa5.01□□□□□ -1.61
TRAV40-201ENST00000390467 SH3BP1Q9Y3L3 701 aa5.01□□□□□ -1.61
TRAV40-201ENST00000390467 SPO11Q9Y5K1 396 aa5.01□□□□□ -1.61
TRAV40-201ENST00000390467 RBM8AQ9Y5S9 174 aaKnown RBP5.01□□□□□ -1.61
TRAV40-201ENST00000390467 A0A1W2PRX2 142 aa5□□□□□ -1.61
TRAV40-201ENST00000390467 FLT3P36888 993 aa5□□□□□ -1.61
TRAV40-201ENST00000390467 BPIFB4P59827 614 aa5□□□□□ -1.61
TRAV40-201ENST00000390467 PTH1RQ03431 593 aa5□□□□□ -1.61
TRAV40-201ENST00000390467 TCIRG1Q13488 830 aa5□□□□□ -1.61
TRAV40-201ENST00000390467 UNQ6494/PRO21346Q6UXR6 183 aa5□□□□□ -1.61
TRAV40-201ENST00000390467 KANSL1Q7Z3B3 1105 aa5□□□□□ -1.61
TRAV40-201ENST00000390467 ADGRE4PQ86SQ3 457 aa5□□□□□ -1.61
TRAV40-201ENST00000390467 CLEC14AQ86T13 490 aa5□□□□□ -1.61
TRAV40-201ENST00000390467 RTF1Q92541 710 aaKnown RBP5□□□□□ -1.61
TRAV40-201ENST00000390467 DYDC2Q96IM9 177 aa5□□□□□ -1.61
TRAV40-201ENST00000390467 RPL10LQ96L21 214 aaKnown RBP5□□□□□ -1.61
TRAV40-201ENST00000390467 MYL10Q9BUA6 226 aa5□□□□□ -1.61
TRAV40-201ENST00000390467 PITHD1Q9GZP4 211 aaPredicted RBP5□□□□□ -1.61
TRAV40-201ENST00000390467 PCED1AQ9H1Q7 454 aa5□□□□□ -1.61
TRAV40-201ENST00000390467 POFUT1Q9H488 388 aa5□□□□□ -1.61
TRAV40-201ENST00000390467 TOMM22Q9NS69 142 aa5□□□□□ -1.61
TRAV40-201ENST00000390467 FANCLQ9NW38 375 aa5□□□□□ -1.61
TRAV40-201ENST00000390467 CAPN14A8MX76 684 aa4.99□□□□□ -1.61
TRAV40-201ENST00000390467 CYR61O00622 381 aa4.99□□□□□ -1.61
TRAV40-201ENST00000390467 H2AFYO75367 372 aaKnown RBP4.99□□□□□ -1.61
TRAV40-201ENST00000390467 HNRNPLP14866 589 aaKnown RBP eCLIP4.99□□□□□ -1.61
TRAV40-201ENST00000390467 HIBADHP31937 336 aaKnown RBP4.99□□□□□ -1.61
TRAV40-201ENST00000390467 TCEA2Q15560 299 aa4.99□□□□□ -1.61
TRAV40-201ENST00000390467 BMP8AQ7Z5Y6 402 aa4.99□□□□□ -1.61
TRAV40-201ENST00000390467 LRRTM3Q86VH5 581 aa4.99□□□□□ -1.61
TRAV40-201ENST00000390467 JAZF1Q86VZ6 243 aa4.99□□□□□ -1.61
TRAV40-201ENST00000390467 C1orf210Q8IVY1 113 aa4.99□□□□□ -1.61
TRAV40-201ENST00000390467 C7orf31Q8N865 590 aa4.99□□□□□ -1.61
TRAV40-201ENST00000390467 ANKRD53Q8N9V6 530 aa4.99□□□□□ -1.61
TRAV40-201ENST00000390467 CHTF18Q8WVB6 975 aa4.99□□□□□ -1.61
TRAV40-201ENST00000390467 GCDHQ92947 438 aaPredicted RBP4.99□□□□□ -1.61
TRAV40-201ENST00000390467 GFM2Q969S9 779 aaKnown RBP4.99□□□□□ -1.61
TRAV40-201ENST00000390467 WDR92Q96MX6 357 aa4.99□□□□□ -1.61
TRAV40-201ENST00000390467 SLC6A15Q9H2J7 730 aa4.99□□□□□ -1.61
TRAV40-201ENST00000390467 MTG2Q9H4K7 406 aa4.99□□□□□ -1.61
TRAV40-201ENST00000390467 A0A0A6YYK5 440 aaPredicted RBP4.98□□□□□ -1.61
TRAV40-201ENST00000390467 LCHNA4D1U4 455 aa4.98□□□□□ -1.61
TRAV40-201ENST00000390467 TGM5O43548 720 aa4.98□□□□□ -1.61
TRAV40-201ENST00000390467 NARSO43776 548 aaKnown RBP4.98□□□□□ -1.61
TRAV40-201ENST00000390467 OPHN1O60890 802 aa4.98□□□□□ -1.61
TRAV40-201ENST00000390467 TOX4O94842 621 aa4.98□□□□□ -1.61
TRAV40-201ENST00000390467 PRPF6O94906 941 aaKnown RBP4.98□□□□□ -1.61
TRAV40-201ENST00000390467 ZNF202O95125 648 aa4.98□□□□□ -1.61
TRAV40-201ENST00000390467 APOL3O95236 402 aa4.98□□□□□ -1.61
TRAV40-201ENST00000390467 F2P00734 622 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms