RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 PHF20L1A8MW92 1017 aa5.36□□□□□ -1.55
LTN1-202ENST00000389194 MT-ND3P03897 115 aa5.36□□□□□ -1.55
LTN1-202ENST00000389194 SLURP2P0DP57 97 aa5.36□□□□□ -1.55
LTN1-202ENST00000389194 ATP2C1P98194 919 aaPredicted RBP5.36□□□□□ -1.55
LTN1-202ENST00000389194 LRRC63Q05C16 580 aa5.36□□□□□ -1.55
LTN1-202ENST00000389194 CACNB2Q08289 660 aaPredicted RBP5.36□□□□□ -1.55
LTN1-202ENST00000389194 TMEM62Q0P6H9 643 aa5.36□□□□□ -1.55
LTN1-202ENST00000389194 RBBP5Q15291 538 aaKnown RBP5.36□□□□□ -1.55
LTN1-202ENST00000389194 TMTC4Q5T4D3 741 aa5.36□□□□□ -1.55
LTN1-202ENST00000389194 ARL6IP4Q66PJ3 421 aaKnown RBP5.36□□□□□ -1.55
LTN1-202ENST00000389194 PLA2G4FQ68DD2 849 aa5.36□□□□□ -1.55
LTN1-202ENST00000389194 CDC26Q8NHZ8 85 aa5.36□□□□□ -1.55
LTN1-202ENST00000389194 EIF2AK1Q9BQI3 630 aaKnown RBP5.36□□□□□ -1.55
LTN1-202ENST00000389194 CPSF2Q9P2I0 782 aaKnown RBP5.36□□□□□ -1.55
LTN1-202ENST00000389194 ANKARQ7Z5J8 1434 aa5.36□□□□□ -1.55
LTN1-202ENST00000389194 M0QZ92 97 aa5.36□□□□□ -1.55
LTN1-202ENST00000389194 ECE2O60344 883 aa5.36□□□□□ -1.55
LTN1-202ENST00000389194 P4HA1P13674 534 aa5.36□□□□□ -1.55
LTN1-202ENST00000389194 NLRP11P59045 1033 aaKnown RBP5.36□□□□□ -1.55
LTN1-202ENST00000389194 TNFAIP1Q13829 316 aa5.36□□□□□ -1.55
LTN1-202ENST00000389194 RWDD4Q6NW29 188 aaKnown RBP5.36□□□□□ -1.55
LTN1-202ENST00000389194 RHPN2Q8IUC4 686 aa5.36□□□□□ -1.55
LTN1-202ENST00000389194 TTC30BQ8N4P2 665 aa5.36□□□□□ -1.55
LTN1-202ENST00000389194 OR6B3Q8NGW1 331 aa5.36□□□□□ -1.55
LTN1-202ENST00000389194 ATP6V0A1Q93050 837 aa5.36□□□□□ -1.55
LTN1-202ENST00000389194 TRIM9Q9C026 710 aa5.36□□□□□ -1.55
LTN1-202ENST00000389194 MRPL46Q9H2W6 279 aaKnown RBP5.36□□□□□ -1.55
LTN1-202ENST00000389194 SHROOM2Q13796 1616 aa5.36□□□□□ -1.55
LTN1-202ENST00000389194 UTYO14607 1347 aa5.36□□□□□ -1.55
LTN1-202ENST00000389194 CDC42BPBQ9Y5S2 1711 aa5.36□□□□□ -1.55
LTN1-202ENST00000389194 MCF2LO15068 1137 aa5.36□□□□□ -1.55
LTN1-202ENST00000389194 YY1P25490 414 aa5.36□□□□□ -1.55
LTN1-202ENST00000389194 KCTD2Q14681 263 aa5.36□□□□□ -1.55
LTN1-202ENST00000389194 KNOP1Q1ED39 458 aaKnown RBP5.36□□□□□ -1.55
LTN1-202ENST00000389194 LRRC36Q1X8D7 754 aa5.36□□□□□ -1.55
LTN1-202ENST00000389194 NBPF9Q3BBW0 867 aa5.36□□□□□ -1.55
LTN1-202ENST00000389194 C1orf228Q6PIY5 440 aa5.36□□□□□ -1.55
LTN1-202ENST00000389194 MDM1Q8TC05 714 aa5.36□□□□□ -1.55
LTN1-202ENST00000389194 ALKBH8Q96BT7 664 aaKnown RBP5.36□□□□□ -1.55
LTN1-202ENST00000389194 DCPSQ96C86 337 aaKnown RBP5.36□□□□□ -1.55
LTN1-202ENST00000389194 CYP4F11Q9HBI6 524 aa5.36□□□□□ -1.55
LTN1-202ENST00000389194 NRBP2Q9NSY0 501 aa5.36□□□□□ -1.55
LTN1-202ENST00000389194 USP20Q9Y2K6 914 aa5.36□□□□□ -1.55
LTN1-202ENST00000389194 MADDQ8WXG6 1647 aa5.36□□□□□ -1.55
LTN1-202ENST00000389194 LAMC1P11047 1609 aa5.36□□□□□ -1.55
LTN1-202ENST00000389194 RNF17Q9BXT8 1623 aaKnown RBP5.36□□□□□ -1.55
LTN1-202ENST00000389194 WDR64B1ANS9 1081 aa5.36□□□□□ -1.55
LTN1-202ENST00000389194 SMIM24O75264 130 aa5.36□□□□□ -1.55
LTN1-202ENST00000389194 CARSP49589 748 aaKnown RBP5.36□□□□□ -1.55
LTN1-202ENST00000389194 SARNPP82979 210 aaKnown RBP5.36□□□□□ -1.55
LTN1-202ENST00000389194 ORC1Q13415 861 aa5.36□□□□□ -1.55
LTN1-202ENST00000389194 EZH2Q15910 746 aaKnown RBP5.36□□□□□ -1.55
LTN1-202ENST00000389194 SNRNP48Q6IEG0 339 aaKnown RBP5.36□□□□□ -1.55
LTN1-202ENST00000389194 KRT27Q7Z3Y8 459 aa5.36□□□□□ -1.55
LTN1-202ENST00000389194 ANKRD36BP1Q96IX9 119 aa5.36□□□□□ -1.55
LTN1-202ENST00000389194 WRNIP1Q96S55 665 aa5.36□□□□□ -1.55
LTN1-202ENST00000389194 PNKPQ96T60 521 aa5.36□□□□□ -1.55
LTN1-202ENST00000389194 PITPNM3Q9BZ71 974 aa5.36□□□□□ -1.55
LTN1-202ENST00000389194 TYW1Q9NV66 732 aaKnown RBP5.36□□□□□ -1.55
LTN1-202ENST00000389194 MED14O60244 1454 aa5.36□□□□□ -1.55
LTN1-202ENST00000389194 PNPLA6Q8IY17 1366 aa5.36□□□□□ -1.55
LTN1-202ENST00000389194 TET3O43151 1660 aa5.35□□□□□ -1.55
LTN1-202ENST00000389194 LRRIQ1Q96JM4 1722 aa5.35□□□□□ -1.55
LTN1-202ENST00000389194 CREB3O43889 395 aa5.35□□□□□ -1.55
LTN1-202ENST00000389194 EVI5O60447 810 aa5.35□□□□□ -1.55
LTN1-202ENST00000389194 PCP11498 1178 aaKnown RBP5.35□□□□□ -1.55
LTN1-202ENST00000389194 TAF11Q15544 211 aa5.35□□□□□ -1.55
LTN1-202ENST00000389194 LONRF1Q17RB8 773 aa5.35□□□□□ -1.55
LTN1-202ENST00000389194 JADE1Q6IE81 842 aa5.35□□□□□ -1.55
LTN1-202ENST00000389194 TXNRD3Q86VQ6 643 aa5.35□□□□□ -1.55
LTN1-202ENST00000389194 RNF135Q8IUD6 432 aa5.35□□□□□ -1.55
LTN1-202ENST00000389194 RSPH10B2B2RC85 870 aa5.35□□□□□ -1.55
LTN1-202ENST00000389194 IPO5O00410 1097 aaKnown RBP5.35□□□□□ -1.55
LTN1-202ENST00000389194 TLR3O15455 904 aaKnown RBP5.35□□□□□ -1.55
LTN1-202ENST00000389194 RSPH10BP0C881 870 aa5.35□□□□□ -1.55
LTN1-202ENST00000389194 CASP4P49662 377 aa5.35□□□□□ -1.55
LTN1-202ENST00000389194 GPS1Q13098 491 aa5.35□□□□□ -1.55
LTN1-202ENST00000389194 NCAPHQ15003 741 aa5.35□□□□□ -1.55
LTN1-202ENST00000389194 ERICH1Q86X53 443 aa5.35□□□□□ -1.55
LTN1-202ENST00000389194 MAIP1Q8WWC4 291 aa5.35□□□□□ -1.55
LTN1-202ENST00000389194 TMEM143Q96AN5 459 aa5.35□□□□□ -1.55
LTN1-202ENST00000389194 DDX27Q96GQ7 796 aaKnown RBP5.35□□□□□ -1.55
LTN1-202ENST00000389194 C9orf72Q96LT7 481 aa5.35□□□□□ -1.55
LTN1-202ENST00000389194 WDR11Q9BZH6 1224 aa5.35□□□□□ -1.55
LTN1-202ENST00000389194 FAM8A1Q9UBU6 413 aa5.35□□□□□ -1.55
LTN1-202ENST00000389194 MARCOQ9UEW3 520 aaPredicted RBP5.35□□□□□ -1.55
LTN1-202ENST00000389194 PPME1Q9Y570 386 aa5.35□□□□□ -1.55
LTN1-202ENST00000389194 CDC42BPGQ6DT37 1551 aa5.35□□□□□ -1.55
LTN1-202ENST00000389194 HECW2Q9P2P5 1572 aa5.35□□□□□ -1.55
LTN1-202ENST00000389194 SART1O43290 800 aaKnown RBP5.35□□□□□ -1.55
LTN1-202ENST00000389194 GAP43P17677 238 aa5.35□□□□□ -1.55
LTN1-202ENST00000389194 POLR2BP30876 1174 aaKnown RBP5.35□□□□□ -1.55
LTN1-202ENST00000389194 USP14P54578 494 aa5.35□□□□□ -1.55
LTN1-202ENST00000389194 RWDD2BP57060 319 aa5.35□□□□□ -1.55
LTN1-202ENST00000389194 DPYDQ12882 1025 aa5.35□□□□□ -1.55
LTN1-202ENST00000389194 ITPK1Q13572 414 aa5.35□□□□□ -1.55
LTN1-202ENST00000389194 EARS2Q5JPH6 523 aaKnown RBP5.35□□□□□ -1.55
LTN1-202ENST00000389194 KIF2BQ8N4N8 673 aa5.35□□□□□ -1.55
LTN1-202ENST00000389194 PDZD8Q8NEN9 1154 aa5.35□□□□□ -1.55
LTN1-202ENST00000389194 ZNF564Q8TBZ8 553 aaPredicted RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms