RNA–Protein interactions for RNA: ENST00000380285.7

SNX1-202, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 8,119 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-202ENST00000380285 INTUQ9ULD6 942 aa10.22□□□□□ -0.77
SNX1-202ENST00000380285 ZHX2Q9Y6X8 837 aa10.22□□□□□ -0.77
SNX1-202ENST00000380285 SSU72P8A0A1W2PR75 194 aa10.22□□□□□ -0.77
SNX1-202ENST00000380285 APOA1P02647 267 aa10.22□□□□□ -0.77
SNX1-202ENST00000380285 FAM83BQ5T0W9 1011 aa10.22□□□□□ -0.77
SNX1-202ENST00000380285 MCPH1Q8NEM0 835 aa10.22□□□□□ -0.77
SNX1-202ENST00000380285 CYTH2Q99418 400 aa10.22□□□□□ -0.77
SNX1-202ENST00000380285 OSBPL1AQ9BXW6 950 aa10.22□□□□□ -0.77
SNX1-202ENST00000380285 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.22□□□□□ -0.77
SNX1-202ENST00000380285 DNAJC12Q9UKB3 198 aa10.22□□□□□ -0.77
SNX1-202ENST00000380285 BMP3P12645 472 aa10.22□□□□□ -0.77
SNX1-202ENST00000380285 HDLBPQ00341 1268 aaKnown RBP10.22□□□□□ -0.77
SNX1-202ENST00000380285 YIPF3Q9GZM5 350 aa10.22□□□□□ -0.77
SNX1-202ENST00000380285 KIF9Q9HAQ2 790 aa10.22□□□□□ -0.77
SNX1-202ENST00000380285 PITPNM2Q9BZ72 1349 aa10.22□□□□□ -0.77
SNX1-202ENST00000380285 CFLARO15519 480 aa10.21□□□□□ -0.77
SNX1-202ENST00000380285 HNRNPRO43390 633 aaKnown RBP10.21□□□□□ -0.77
SNX1-202ENST00000380285 NR3C1P04150 777 aa10.21□□□□□ -0.77
SNX1-202ENST00000380285 SYDE2Q5VT97 1194 aa10.21□□□□□ -0.77
SNX1-202ENST00000380285 DYDC2Q96IM9 177 aa10.21□□□□□ -0.77
SNX1-202ENST00000380285 LRRC4Q9HBW1 653 aa10.21□□□□□ -0.77
SNX1-202ENST00000380285 SNX24Q9Y343 169 aa10.21□□□□□ -0.77
SNX1-202ENST00000380285 UBE4BO95155 1302 aa10.21□□□□□ -0.77
SNX1-202ENST00000380285 CLIC2O15247 247 aa10.21□□□□□ -0.77
SNX1-202ENST00000380285 ZBTB24O43167 697 aaPredicted RBP10.21□□□□□ -0.77
SNX1-202ENST00000380285 PTPN12Q05209 780 aaKnown RBP10.21□□□□□ -0.77
SNX1-202ENST00000380285 TMTC4Q5T4D3 741 aa10.21□□□□□ -0.77
SNX1-202ENST00000380285 CMTM5Q96DZ9 223 aa10.21□□□□□ -0.77
SNX1-202ENST00000380285 PAWRQ96IZ0 340 aaKnown RBP10.21□□□□□ -0.77
SNX1-202ENST00000380285 ROPN1BQ9BZX4 212 aaPredicted RBP10.21□□□□□ -0.77
SNX1-202ENST00000380285 TRPV6Q9H1D0 765 aa10.21□□□□□ -0.77
SNX1-202ENST00000380285 ROPN1Q9HAT0 212 aaPredicted RBP10.21□□□□□ -0.77
SNX1-202ENST00000380285 ADAM22Q9P0K1 906 aa10.21□□□□□ -0.77
SNX1-202ENST00000380285 CNOT8Q9UFF9 292 aaKnown RBP10.21□□□□□ -0.77
SNX1-202ENST00000380285 PIK3R2O00459 728 aa10.21□□□□□ -0.77
SNX1-202ENST00000380285 PMLP29590 882 aa10.21□□□□□ -0.77
SNX1-202ENST00000380285 SLC30A9Q6PML9 568 aa10.21□□□□□ -0.77
SNX1-202ENST00000380285 SPATA21Q7Z572 469 aa10.21□□□□□ -0.77
SNX1-202ENST00000380285 RAD54LQ92698 747 aa10.21□□□□□ -0.77
SNX1-202ENST00000380285 LIMA1Q9UHB6 759 aaKnown RBP10.21□□□□□ -0.77
SNX1-202ENST00000380285 WDR91A4D1P6 747 aa10.21□□□□□ -0.78
SNX1-202ENST00000380285 PRCPP42785 496 aa10.21□□□□□ -0.78
SNX1-202ENST00000380285 GIMAP8Q8ND71 665 aaPredicted RBP10.21□□□□□ -0.78
SNX1-202ENST00000380285 BTBD6Q96KE9 485 aa10.21□□□□□ -0.78
SNX1-202ENST00000380285 CEP170P1Q96L14 293 aa10.21□□□□□ -0.78
SNX1-202ENST00000380285 SUCLA2Q9P2R7 463 aaPredicted RBP10.21□□□□□ -0.78
SNX1-202ENST00000380285 A0A1B0GTH6 734 aa10.21□□□□□ -0.78
SNX1-202ENST00000380285 CIITAP33076 1130 aa10.21□□□□□ -0.78
SNX1-202ENST00000380285 EFTUD2Q15029 972 aaKnown RBP eCLIP10.21□□□□□ -0.787e-14■■■■■ 31
SNX1-202ENST00000380285 KIF19Q2TAC6 998 aa10.21□□□□□ -0.78
SNX1-202ENST00000380285 XXYLT1Q8NBI6 393 aa10.21□□□□□ -0.78
SNX1-202ENST00000380285 SUGCTQ9HAC7 445 aa10.21□□□□□ -0.78
SNX1-202ENST00000380285 ZNF212Q9UDV6 495 aa10.21□□□□□ -0.78
SNX1-202ENST00000380285 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.21□□□□□ -0.78
SNX1-202ENST00000380285 AP3M2P53677 418 aa10.21□□□□□ -0.78
SNX1-202ENST00000380285 KCNH2Q12809 1159 aa10.21□□□□□ -0.78
SNX1-202ENST00000380285 TBCCQ15814 346 aa10.21□□□□□ -0.78
SNX1-202ENST00000380285 ARHGAP27Q6ZUM4 889 aa10.21□□□□□ -0.78
SNX1-202ENST00000380285 RHOT1Q8IXI2 618 aa10.21□□□□□ -0.78
SNX1-202ENST00000380285 PUS7LQ9H0K6 701 aaKnown RBP10.21□□□□□ -0.78
SNX1-202ENST00000380285 EML4Q9HC35 981 aaKnown RBP10.21□□□□□ -0.78
SNX1-202ENST00000380285 PAIP2BQ9ULR5 123 aaKnown RBP10.21□□□□□ -0.78
SNX1-202ENST00000380285 TRAF3IP3Q9Y228 551 aa10.21□□□□□ -0.78
SNX1-202ENST00000380285 GOLGA8SH3BPF8 625 aa10.2□□□□□ -0.78
SNX1-202ENST00000380285 DDX5P17844 614 aaKnown RBP10.2□□□□□ -0.78
SNX1-202ENST00000380285 HIC1Q14526 733 aa10.2□□□□□ -0.78
SNX1-202ENST00000380285 MCUQ8NE86 351 aa10.2□□□□□ -0.78
SNX1-202ENST00000380285 EEF2KMTQ96G04 330 aa10.2□□□□□ -0.78
SNX1-202ENST00000380285 USP15Q9Y4E8 981 aaPredicted RBP10.2□□□□□ -0.78
SNX1-202ENST00000380285 CDH16O75309 829 aa10.2□□□□□ -0.78
SNX1-202ENST00000380285 PDHA1P08559 390 aa10.2□□□□□ -0.78
SNX1-202ENST00000380285 DYNLT1P63172 113 aa10.2□□□□□ -0.78
SNX1-202ENST00000380285 CCDC144BQ3MJ40 725 aa10.2□□□□□ -0.78
SNX1-202ENST00000380285 UIMC1Q96RL1 719 aa10.2□□□□□ -0.78
SNX1-202ENST00000380285 GOLPH3LQ9H4A5 285 aa10.2□□□□□ -0.78
SNX1-202ENST00000380285 STK32BQ9NY57 414 aa10.2□□□□□ -0.78
SNX1-202ENST00000380285 PXDNLA1KZ92 1463 aa10.2□□□□□ -0.78
SNX1-202ENST00000380285 SYF2O95926 243 aaKnown RBP10.2□□□□□ -0.78
SNX1-202ENST00000380285 CYP2E1P05181 493 aaPredicted RBP10.2□□□□□ -0.78
SNX1-202ENST00000380285 IL10P22301 178 aa10.2□□□□□ -0.78
SNX1-202ENST00000380285 AARSP49588 968 aaKnown RBP eCLIP10.2□□□□□ -0.78
SNX1-202ENST00000380285 KNOP1Q1ED39 458 aaKnown RBP10.2□□□□□ -0.78
SNX1-202ENST00000380285 CCDC137Q6PK04 289 aaKnown RBP10.2□□□□□ -0.78
SNX1-202ENST00000380285 KCTD17Q8N5Z5 321 aa10.2□□□□□ -0.78
SNX1-202ENST00000380285 ENAHQ8N8S7 591 aaPredicted RBP10.2□□□□□ -0.78
SNX1-202ENST00000380285 PIGSQ96S52 555 aa10.2□□□□□ -0.78
SNX1-202ENST00000380285 ARHGEF40Q8TER5 1519 aa10.2□□□□□ -0.78
SNX1-202ENST00000380285 PLEKHG2Q9H7P9 1386 aa10.2□□□□□ -0.78
SNX1-202ENST00000380285 SLC16A3O15427 465 aaKnown RBP10.2□□□□□ -0.78
SNX1-202ENST00000380285 DEAF1O75398 565 aaPredicted RBP10.2□□□□□ -0.78
SNX1-202ENST00000380285 ADCY1Q08828 1119 aa10.2□□□□□ -0.78
SNX1-202ENST00000380285 RGS9BPQ6ZS82 235 aa10.2□□□□□ -0.78
SNX1-202ENST00000380285 SIX6OS1Q8N1H7 587 aa10.2□□□□□ -0.78
SNX1-202ENST00000380285 STAG2Q8N3U4 1231 aa10.2□□□□□ -0.78
SNX1-202ENST00000380285 ZNF564Q8TBZ8 553 aaPredicted RBP10.2□□□□□ -0.78
SNX1-202ENST00000380285 CCT8L2Q96SF2 557 aa10.2□□□□□ -0.78
SNX1-202ENST00000380285 SLC13A4Q9UKG4 626 aa10.2□□□□□ -0.78
SNX1-202ENST00000380285 MAGI3Q5TCQ9 1506 aa10.2□□□□□ -0.78
SNX1-202ENST00000380285 WDR64B1ANS9 1081 aa10.2□□□□□ -0.78
SNX1-202ENST00000380285 E7ENQ6 273 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms