RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 KCTD10Q9H3F6 313 aa27.08■■□□□ 1.93
ECHDC3-201ENST00000379215 XPNPEP1Q9NQW7 623 aa27.08■■□□□ 1.93
ECHDC3-201ENST00000379215 COL1A2P08123 1366 aa27.07■■□□□ 1.92
ECHDC3-201ENST00000379215 PDXKO00764 312 aa27.07■■□□□ 1.92
ECHDC3-201ENST00000379215 DYNC1LI2O43237 492 aaPredicted RBP27.07■■□□□ 1.92
ECHDC3-201ENST00000379215 CALUO43852 315 aaPredicted RBP27.07■■□□□ 1.92
ECHDC3-201ENST00000379215 MAFO75444 373 aaPredicted RBP27.07■■□□□ 1.92
ECHDC3-201ENST00000379215 CYBAP13498 195 aa27.07■■□□□ 1.92
ECHDC3-201ENST00000379215 HTRA3P83110 453 aa27.07■■□□□ 1.92
ECHDC3-201ENST00000379215 FKBP3Q00688 224 aaKnown RBP27.07■■□□□ 1.92
ECHDC3-201ENST00000379215 PPP2R5AQ15172 486 aa27.07■■□□□ 1.92
ECHDC3-201ENST00000379215 ZNF484Q5JVG2 852 aa27.07■■□□□ 1.92
ECHDC3-201ENST00000379215 GOLGA5Q8TBA6 731 aa27.07■■□□□ 1.92
ECHDC3-201ENST00000379215 SRRTQ9BXP5 876 aaKnown RBP27.07■■□□□ 1.92
ECHDC3-201ENST00000379215 TYW1Q9NV66 732 aaKnown RBP27.07■■□□□ 1.92
ECHDC3-201ENST00000379215 FKTNO75072 461 aa27.06■■□□□ 1.92
ECHDC3-201ENST00000379215 NMT1P30419 496 aaKnown RBP27.06■■□□□ 1.92
ECHDC3-201ENST00000379215 NCKAP1LP55160 1127 aa27.06■■□□□ 1.92
ECHDC3-201ENST00000379215 PRMT2P55345 433 aa27.06■■□□□ 1.92
ECHDC3-201ENST00000379215 UBASH3AP57075 661 aa27.06■■□□□ 1.92
ECHDC3-201ENST00000379215 NELFCDQ8IXH7 590 aa27.06■■□□□ 1.92
ECHDC3-201ENST00000379215 CD99L2Q8TCZ2 262 aa27.06■■□□□ 1.92
ECHDC3-201ENST00000379215 TCP11Q8WWU5 503 aa27.06■■□□□ 1.92
ECHDC3-201ENST00000379215 NTPCRQ9BSD7 190 aaKnown RBP27.06■■□□□ 1.92
ECHDC3-201ENST00000379215 TMEM206Q9H813 350 aa27.06■■□□□ 1.92
ECHDC3-201ENST00000379215 POLD4Q9HCU8 107 aa27.06■■□□□ 1.92
ECHDC3-201ENST00000379215 GPRC5CQ9NQ84 441 aa27.06■■□□□ 1.92
ECHDC3-201ENST00000379215 IFNKQ9P0W0 207 aa27.06■■□□□ 1.92
ECHDC3-201ENST00000379215 TRAF3IP3Q9Y228 551 aa27.06■■□□□ 1.92
ECHDC3-201ENST00000379215 PPP1R37O75864 691 aa27.05■■□□□ 1.92
ECHDC3-201ENST00000379215 PEX3P56589 373 aa27.05■■□□□ 1.92
ECHDC3-201ENST00000379215 CEP63Q96MT8 703 aa27.05■■□□□ 1.92
ECHDC3-201ENST00000379215 C16orf70Q9BSU1 422 aa27.05■■□□□ 1.92
ECHDC3-201ENST00000379215 STRA6Q9BX79 667 aa27.05■■□□□ 1.92
ECHDC3-201ENST00000379215 POLR3FQ9H1D9 316 aaPredicted RBP27.05■■□□□ 1.92
ECHDC3-201ENST00000379215 KCNJ18B7U540 433 aa27.05■■□□□ 1.92
ECHDC3-201ENST00000379215 H3BRB1 525 aa27.05■■□□□ 1.92
ECHDC3-201ENST00000379215 ADCY6O43306 1168 aa27.05■■□□□ 1.92
ECHDC3-201ENST00000379215 DUSP11O75319 330 aaKnown RBP27.05■■□□□ 1.92
ECHDC3-201ENST00000379215 PRPF6O94906 941 aaKnown RBP27.05■■□□□ 1.92
ECHDC3-201ENST00000379215 MAP2K1Q02750 393 aaPredicted RBP27.05■■□□□ 1.92
ECHDC3-201ENST00000379215 KCNJ12Q14500 433 aa27.05■■□□□ 1.92
ECHDC3-201ENST00000379215 FILIP1LQ4L180 1135 aa27.05■■□□□ 1.92
ECHDC3-201ENST00000379215 TCP11X2Q5H9J9 407 aa27.05■■□□□ 1.92
ECHDC3-201ENST00000379215 TUT1Q9H6E5 874 aaKnown RBP27.05■■□□□ 1.92
ECHDC3-201ENST00000379215 LIMA1Q9UHB6 759 aaKnown RBP27.05■■□□□ 1.92
ECHDC3-201ENST00000379215 GNA14O95837 355 aa27.04■■□□□ 1.92
ECHDC3-201ENST00000379215 TPM2P07951 284 aa27.04■■□□□ 1.92
ECHDC3-201ENST00000379215 RPL13P26373 211 aaKnown RBP27.04■■□□□ 1.92
ECHDC3-201ENST00000379215 HS2ST1Q7LGA3 356 aa27.04■■□□□ 1.92
ECHDC3-201ENST00000379215 BEGAINQ9BUH8 593 aa27.04■■□□□ 1.92
ECHDC3-201ENST00000379215 KMT5AQ9NQR1 393 aa27.04■■□□□ 1.92
ECHDC3-201ENST00000379215 CGNQ9P2M7 1197 aaKnown RBP27.04■■□□□ 1.92
ECHDC3-201ENST00000379215 ZSWIM8A7E2V4 1837 aa27.04■■□□□ 1.92
ECHDC3-201ENST00000379215 GOLGA6L6A8MZA4 724 aa27.03■■□□□ 1.92
ECHDC3-201ENST00000379215 PTGS1P23219 599 aa27.03■■□□□ 1.92
ECHDC3-201ENST00000379215 NPTX2P47972 431 aa27.03■■□□□ 1.92
ECHDC3-201ENST00000379215 SNRPFP62306 86 aaKnown RBP27.03■■□□□ 1.92
ECHDC3-201ENST00000379215 GTF2BQ00403 316 aa27.03■■□□□ 1.92
ECHDC3-201ENST00000379215 NFIL3Q16649 462 aa27.03■■□□□ 1.92
ECHDC3-201ENST00000379215 IER5Q5VY09 327 aa27.03■■□□□ 1.92
ECHDC3-201ENST00000379215 HAUS6Q7Z4H7 955 aa27.03■■□□□ 1.92
ECHDC3-201ENST00000379215 KCNN1Q92952 543 aa27.03■■□□□ 1.92
ECHDC3-201ENST00000379215 ACCSQ96QU6 501 aa27.03■■□□□ 1.92
ECHDC3-201ENST00000379215 XPO4Q9C0E2 1151 aaKnown RBP27.03■■□□□ 1.92
ECHDC3-201ENST00000379215 EXOC7Q9UPT5 735 aa27.03■■□□□ 1.92
ECHDC3-201ENST00000379215 LRRC10BA6NIK2 292 aa27.02■■□□□ 1.92
ECHDC3-201ENST00000379215 CCDC169A6NNP5 214 aa27.02■■□□□ 1.92
ECHDC3-201ENST00000379215 MAGEB2O15479 319 aa27.02■■□□□ 1.92
ECHDC3-201ENST00000379215 SEPT4O43236 478 aa27.02■■□□□ 1.92
ECHDC3-201ENST00000379215 KPNA6O60684 536 aa27.02■■□□□ 1.92
ECHDC3-201ENST00000379215 ZNF286BP0CG31 522 aa27.02■■□□□ 1.92
ECHDC3-201ENST00000379215 ARL2P36404 184 aa27.02■■□□□ 1.92
ECHDC3-201ENST00000379215 HSP90AA4PQ58FG1 418 aa27.02■■□□□ 1.92
ECHDC3-201ENST00000379215 ZC3H3Q8IXZ2 948 aaKnown RBP27.02■■□□□ 1.92
ECHDC3-201ENST00000379215 RETREG2Q8NC44 543 aa27.02■■□□□ 1.92
ECHDC3-201ENST00000379215 PXYLP1Q8TE99 480 aa27.02■■□□□ 1.92
ECHDC3-201ENST00000379215 SPC25Q9HBM1 224 aa27.02■■□□□ 1.92
ECHDC3-201ENST00000379215 IGKV6-21A0A0C4DH24 114 aa27.01■■□□□ 1.92
ECHDC3-201ENST00000379215 ZBTB42B2RXF5 422 aa27.01■■□□□ 1.92
ECHDC3-201ENST00000379215 HMGCRP04035 888 aa27.01■■□□□ 1.92
ECHDC3-201ENST00000379215 NAMPTP43490 491 aa27.01■■□□□ 1.92
ECHDC3-201ENST00000379215 RAET1EQ8TD07 263 aa27.01■■□□□ 1.92
ECHDC3-201ENST00000379215 GBP3Q9H0R5 595 aa27.01■■□□□ 1.92
ECHDC3-201ENST00000379215 MYH11P35749 1972 aa27.01■■□□□ 1.91
ECHDC3-201ENST00000379215 PHLPP2Q6ZVD8 1323 aa27.01■■□□□ 1.91
ECHDC3-201ENST00000379215 CETN3O15182 167 aa27.01■■□□□ 1.91
ECHDC3-201ENST00000379215 F2P00734 622 aa27.01■■□□□ 1.91
ECHDC3-201ENST00000379215 HOXD13P35453 343 aa27.01■■□□□ 1.91
ECHDC3-201ENST00000379215 ZC2HC1CQ53FD0 456 aaPredicted RBP27.01■■□□□ 1.91
ECHDC3-201ENST00000379215 LRRC55Q6ZSA7 311 aa27.01■■□□□ 1.91
ECHDC3-201ENST00000379215 DRC7Q8IY82 874 aa27.01■■□□□ 1.91
ECHDC3-201ENST00000379215 SYCP3Q8IZU3 236 aa27.01■■□□□ 1.91
ECHDC3-201ENST00000379215 TRPV1Q8NER1 839 aa27.01■■□□□ 1.91
ECHDC3-201ENST00000379215 KATNAL1Q9BW62 490 aa27.01■■□□□ 1.91
ECHDC3-201ENST00000379215 RNPEPQ9H4A4 650 aa27.01■■□□□ 1.91
ECHDC3-201ENST00000379215 A0A1B0GTH6 734 aa27■■□□□ 1.91
ECHDC3-201ENST00000379215 DNM2P50570 870 aa27■■□□□ 1.91
ECHDC3-201ENST00000379215 MXD4Q14582 209 aaPredicted RBP27■■□□□ 1.91
ECHDC3-201ENST00000379215 KRT31Q15323 416 aa27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms