RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 KCNT2Q6UVM3 1135 aa15.6■□□□□ 0.09
CXCL12-202ENST00000374426 Q6ZUG5 572 aa15.6■□□□□ 0.09
CXCL12-202ENST00000374426 PRSS33Q8NF86 280 aa15.6■□□□□ 0.09
CXCL12-202ENST00000374426 BRF1Q92994 677 aa15.6■□□□□ 0.09
CXCL12-202ENST00000374426 PHKBQ93100 1093 aa15.6■□□□□ 0.09
CXCL12-202ENST00000374426 ZNF668Q96K58 619 aaPredicted RBP15.6■□□□□ 0.09
CXCL12-202ENST00000374426 FAM167AQ96KS9 214 aa15.6■□□□□ 0.09
CXCL12-202ENST00000374426 MAP7D2Q96T17 732 aa15.6■□□□□ 0.09
CXCL12-202ENST00000374426 PUF60Q9UHX1 559 aaKnown RBP15.6■□□□□ 0.09
CXCL12-202ENST00000374426 WDR64B1ANS9 1081 aa15.59■□□□□ 0.09
CXCL12-202ENST00000374426 CDC45O75419 566 aa15.59■□□□□ 0.09
CXCL12-202ENST00000374426 OATP04181 439 aa15.59■□□□□ 0.09
CXCL12-202ENST00000374426 TMOD1P28289 359 aa15.59■□□□□ 0.09
CXCL12-202ENST00000374426 TECP42680 631 aa15.59■□□□□ 0.09
CXCL12-202ENST00000374426 PRKCEQ02156 737 aa15.59■□□□□ 0.09
CXCL12-202ENST00000374426 UGCGQ16739 394 aa15.59■□□□□ 0.09
CXCL12-202ENST00000374426 CLLU1OSQ5K130 101 aa15.59■□□□□ 0.09
CXCL12-202ENST00000374426 ANKRD54Q6NXT1 300 aa15.59■□□□□ 0.09
CXCL12-202ENST00000374426 ECHDC2Q86YB7 292 aa15.59■□□□□ 0.09
CXCL12-202ENST00000374426 LRRC43Q8N309 656 aa15.59■□□□□ 0.09
CXCL12-202ENST00000374426 KCNB2Q92953 911 aa15.59■□□□□ 0.09
CXCL12-202ENST00000374426 ZNF558Q96NG5 402 aa15.59■□□□□ 0.09
CXCL12-202ENST00000374426 PHOX2BQ99453 314 aa15.59■□□□□ 0.09
CXCL12-202ENST00000374426 NGRNQ9NPE2 291 aaKnown RBP15.59■□□□□ 0.09
CXCL12-202ENST00000374426 ENTPD7Q9NQZ7 604 aa15.59■□□□□ 0.09
CXCL12-202ENST00000374426 DISC1Q9NRI5 854 aa15.59■□□□□ 0.09
CXCL12-202ENST00000374426 CFAP54Q96N23 3096 aa15.59■□□□□ 0.09
CXCL12-202ENST00000374426 MYO15AQ9UKN7 3530 aa15.59■□□□□ 0.09
CXCL12-202ENST00000374426 MSH4O15457 936 aa15.58■□□□□ 0.08
CXCL12-202ENST00000374426 SRGAP2BP0DMP2 458 aa15.58■□□□□ 0.08
CXCL12-202ENST00000374426 DARSP14868 501 aaKnown RBP15.58■□□□□ 0.08
CXCL12-202ENST00000374426 ZSCAN20P17040 1043 aaPredicted RBP15.58■□□□□ 0.08
CXCL12-202ENST00000374426 PPM1AP35813 382 aa15.58■□□□□ 0.08
CXCL12-202ENST00000374426 GPC3P51654 580 aa15.58■□□□□ 0.08
CXCL12-202ENST00000374426 SIGLEC14Q08ET2 396 aa15.58■□□□□ 0.08
CXCL12-202ENST00000374426 NTRK3Q16288 839 aa15.58■□□□□ 0.08
CXCL12-202ENST00000374426 LLGL2Q6P1M3 1020 aa15.58■□□□□ 0.08
CXCL12-202ENST00000374426 ABI1Q8IZP0 508 aa15.58■□□□□ 0.08
CXCL12-202ENST00000374426 ZNF710Q8N1W2 664 aa15.58■□□□□ 0.08
CXCL12-202ENST00000374426 FBXL6Q8N531 539 aa15.58■□□□□ 0.08
CXCL12-202ENST00000374426 RNF169Q8NCN4 708 aa15.58■□□□□ 0.08
CXCL12-202ENST00000374426 BICD2Q8TD16 824 aa15.58■□□□□ 0.08
CXCL12-202ENST00000374426 ASIC4Q96FT7 647 aa15.58■□□□□ 0.08
CXCL12-202ENST00000374426 JAKMIP1Q96N16 626 aaKnown RBP15.58■□□□□ 0.08
CXCL12-202ENST00000374426 APOL5Q9BWW9 433 aa15.58■□□□□ 0.08
CXCL12-202ENST00000374426 WDR81Q562E7 1941 aa15.57■□□□□ 0.08
CXCL12-202ENST00000374426 A0A0U1RQF3 1178 aa15.57■□□□□ 0.08
CXCL12-202ENST00000374426 FGFR4P22455 802 aa15.57■□□□□ 0.08
CXCL12-202ENST00000374426 KRT17Q04695 432 aa15.57■□□□□ 0.08
CXCL12-202ENST00000374426 TMC7Q7Z402 723 aa15.57■□□□□ 0.08
CXCL12-202ENST00000374426 ZNF598Q86UK7 904 aaKnown RBP15.57■□□□□ 0.08
CXCL12-202ENST00000374426 SUGP1Q8IWZ8 645 aaKnown RBP15.57■□□□□ 0.08
CXCL12-202ENST00000374426 FBXL16Q8N461 479 aa15.57■□□□□ 0.08
CXCL12-202ENST00000374426 GJA10Q969M2 543 aa15.57■□□□□ 0.08
CXCL12-202ENST00000374426 CCDC136Q96JN2 1154 aa15.57■□□□□ 0.08
CXCL12-202ENST00000374426 RIT2Q99578 217 aa15.57■□□□□ 0.08
CXCL12-202ENST00000374426 RNF26Q9BY78 433 aaPredicted RBP15.57■□□□□ 0.08
CXCL12-202ENST00000374426 AGXT2Q9BYV1 514 aa15.57■□□□□ 0.08
CXCL12-202ENST00000374426 NRBP2Q9NSY0 501 aa15.57■□□□□ 0.08
CXCL12-202ENST00000374426 SPG21Q9NZD8 308 aa15.57■□□□□ 0.08
CXCL12-202ENST00000374426 VPS54Q9P1Q0 977 aa15.57■□□□□ 0.08
CXCL12-202ENST00000374426 CDH22Q9UJ99 828 aa15.57■□□□□ 0.08
CXCL12-202ENST00000374426 SNX14Q9Y5W7 946 aa15.57■□□□□ 0.08
CXCL12-202ENST00000374426 CHMP2AO43633 222 aa15.56■□□□□ 0.08
CXCL12-202ENST00000374426 GAS7O60861 476 aa15.56■□□□□ 0.08
CXCL12-202ENST00000374426 CSDE1O75534 798 aaKnown RBP15.56■□□□□ 0.08
CXCL12-202ENST00000374426 HOXB8P17481 243 aaPredicted RBP15.56■□□□□ 0.08
CXCL12-202ENST00000374426 HSPA4P34932 840 aa15.56■□□□□ 0.08
CXCL12-202ENST00000374426 AKAP17AQ02040 695 aaKnown RBP15.56■□□□□ 0.08
CXCL12-202ENST00000374426 TBC1D8BQ0IIM8 1120 aa15.56■□□□□ 0.08
CXCL12-202ENST00000374426 TCF15Q12870 199 aa15.56■□□□□ 0.08
CXCL12-202ENST00000374426 DRP2Q13474 957 aa15.56■□□□□ 0.08
CXCL12-202ENST00000374426 TARBP2Q15633 366 aaKnown RBP15.56■□□□□ 0.08
CXCL12-202ENST00000374426 PTPN21Q16825 1174 aa15.56■□□□□ 0.08
CXCL12-202ENST00000374426 BLOC1S2Q6QNY1 142 aa15.56■□□□□ 0.08
CXCL12-202ENST00000374426 CENPQQ7L2Z9 268 aaPredicted RBP15.56■□□□□ 0.08
CXCL12-202ENST00000374426 SLC39A11Q8N1S5 342 aa15.56■□□□□ 0.08
CXCL12-202ENST00000374426 MRPL43Q8N983 215 aaKnown RBP15.56■□□□□ 0.08
CXCL12-202ENST00000374426 CCDC148Q8NFR7 591 aa15.56■□□□□ 0.08
CXCL12-202ENST00000374426 HELQQ8TDG4 1101 aa15.56■□□□□ 0.08
CXCL12-202ENST00000374426 SLC5A5Q92911 643 aa15.56■□□□□ 0.08
CXCL12-202ENST00000374426 SLC26A6Q9BXS9 759 aa15.56■□□□□ 0.08
CXCL12-202ENST00000374426 UNC45AQ9H3U1 944 aa15.56■□□□□ 0.08
CXCL12-202ENST00000374426 C2orf71A6NGG8 1288 aa15.55■□□□□ 0.08
CXCL12-202ENST00000374426 EOMESO95936 686 aa15.55■□□□□ 0.08
CXCL12-202ENST00000374426 IFNAR1P17181 557 aa15.55■□□□□ 0.08
CXCL12-202ENST00000374426 RPS6KB1P23443 525 aa15.55■□□□□ 0.08
CXCL12-202ENST00000374426 SP100P23497 879 aaPredicted RBP15.55■□□□□ 0.08
CXCL12-202ENST00000374426 SFNP31947 248 aa15.55■□□□□ 0.08
CXCL12-202ENST00000374426 USP11P51784 963 aa15.55■□□□□ 0.08
CXCL12-202ENST00000374426 JAK3P52333 1124 aa15.55■□□□□ 0.08
CXCL12-202ENST00000374426 PTPN5P54829 565 aa15.55■□□□□ 0.08
CXCL12-202ENST00000374426 LRCH2Q5VUJ6 765 aa15.55■□□□□ 0.08
CXCL12-202ENST00000374426 NLRP7Q8WX94 980 aa15.55■□□□□ 0.08
CXCL12-202ENST00000374426 SCLT1Q96NL6 688 aa15.55■□□□□ 0.08
CXCL12-202ENST00000374426 CEP89Q96ST8 783 aa15.55■□□□□ 0.08
CXCL12-202ENST00000374426 HCFC2Q9Y5Z7 792 aa15.55■□□□□ 0.08
CXCL12-202ENST00000374426 DMDP11532 3685 aa15.55■□□□□ 0.08
CXCL12-202ENST00000374426 TMEM150BA6NC51 233 aa15.54■□□□□ 0.08
CXCL12-202ENST00000374426 PSMD10O75832 226 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms