RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 LRRC8CQ8TDW0 803 aa10.31□□□□□ -0.76
SF3A3-201ENST00000373019 INPP5DQ92835 1189 aa10.31□□□□□ -0.76
SF3A3-201ENST00000373019 AGAP3Q96P47 875 aa10.31□□□□□ -0.76
SF3A3-201ENST00000373019 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.31□□□□□ -0.762e-6■■■□□ 18.8
SF3A3-201ENST00000373019 TRIM31Q9BZY9 425 aa10.31□□□□□ -0.76
SF3A3-201ENST00000373019 METTL5Q9NRN9 209 aaKnown RBP10.31□□□□□ -0.76
SF3A3-201ENST00000373019 STK32BQ9NY57 414 aa10.31□□□□□ -0.76
SF3A3-201ENST00000373019 NR2E1Q9Y466 385 aa10.31□□□□□ -0.76
SF3A3-201ENST00000373019 KRIT1O00522 736 aa10.31□□□□□ -0.76
SF3A3-201ENST00000373019 SCARF1Q14162 830 aa10.31□□□□□ -0.76
SF3A3-201ENST00000373019 RPS6KA1Q15418 735 aa10.31□□□□□ -0.76
SF3A3-201ENST00000373019 PTPROQ16827 1216 aa10.31□□□□□ -0.76
SF3A3-201ENST00000373019 C6orf118Q5T5N4 469 aa10.31□□□□□ -0.76
SF3A3-201ENST00000373019 VSTM1Q6UX27 236 aa10.31□□□□□ -0.76
SF3A3-201ENST00000373019 ZNF365Q70YC5 407 aa10.31□□□□□ -0.76
SF3A3-201ENST00000373019 SLC15A3Q8IY34 581 aa10.31□□□□□ -0.76
SF3A3-201ENST00000373019 NEK9Q8TD19 979 aa10.31□□□□□ -0.76
SF3A3-201ENST00000373019 TNFRSF25Q93038 417 aa10.31□□□□□ -0.76
SF3A3-201ENST00000373019 TUBGCP5Q96RT8 1024 aa10.31□□□□□ -0.76
SF3A3-201ENST00000373019 BRD8Q9H0E9 1235 aa10.31□□□□□ -0.76
SF3A3-201ENST00000373019 MMRN2Q9H8L6 949 aa10.31□□□□□ -0.76
SF3A3-201ENST00000373019 GPR108Q9NPR9 543 aa10.31□□□□□ -0.76
SF3A3-201ENST00000373019 STOML1Q9UBI4 398 aa10.31□□□□□ -0.76
SF3A3-201ENST00000373019 PNPLA7Q6ZV29 1317 aa10.31□□□□□ -0.76
SF3A3-201ENST00000373019 A6NJR5 290 aa10.31□□□□□ -0.76
SF3A3-201ENST00000373019 PGRMC1O00264 195 aaKnown RBP10.31□□□□□ -0.76
SF3A3-201ENST00000373019 E2F6O75461 281 aa10.31□□□□□ -0.76
SF3A3-201ENST00000373019 GH1P01241 217 aa10.31□□□□□ -0.76
SF3A3-201ENST00000373019 SULT2A1Q06520 285 aa10.31□□□□□ -0.76
SF3A3-201ENST00000373019 MPP2Q14168 576 aa10.31□□□□□ -0.76
SF3A3-201ENST00000373019 ZRSR2Q15696 482 aaKnown RBP10.31□□□□□ -0.76
SF3A3-201ENST00000373019 NPY5RQ15761 445 aa10.31□□□□□ -0.76
SF3A3-201ENST00000373019 RFWD3Q6PCD5 774 aa10.31□□□□□ -0.76
SF3A3-201ENST00000373019 SEPT14Q6ZU15 432 aa10.31□□□□□ -0.76
SF3A3-201ENST00000373019 LRRC15Q8TF66 581 aa10.31□□□□□ -0.76
SF3A3-201ENST00000373019 C17orf50Q8WW18 174 aa10.31□□□□□ -0.76
SF3A3-201ENST00000373019 LENG1Q96BZ8 264 aaPredicted RBP10.31□□□□□ -0.76
SF3A3-201ENST00000373019 PHF20Q9BVI0 1012 aa10.31□□□□□ -0.76
SF3A3-201ENST00000373019 SEMA4AQ9H3S1 761 aa10.31□□□□□ -0.76
SF3A3-201ENST00000373019 SLITRK6Q9H5Y7 841 aa10.31□□□□□ -0.76
SF3A3-201ENST00000373019 MLXIPLQ9NP71 852 aa10.31□□□□□ -0.76
SF3A3-201ENST00000373019 CHKBQ9Y259 395 aa10.31□□□□□ -0.76
SF3A3-201ENST00000373019 CCDC188H7C350 402 aa10.3□□□□□ -0.76
SF3A3-201ENST00000373019 PKN1Q16512 942 aa10.3□□□□□ -0.76
SF3A3-201ENST00000373019 NCCRP1Q6ZVX7 275 aaPredicted RBP10.3□□□□□ -0.76
SF3A3-201ENST00000373019 TTC5Q8N0Z6 440 aa10.3□□□□□ -0.76
SF3A3-201ENST00000373019 LRRC57Q8N9N7 239 aa10.3□□□□□ -0.76
SF3A3-201ENST00000373019 CKAP2Q8WWK9 683 aa10.3□□□□□ -0.76
SF3A3-201ENST00000373019 SPIRE2Q8WWL2 714 aa10.3□□□□□ -0.76
SF3A3-201ENST00000373019 P2RX5Q93086 422 aa10.3□□□□□ -0.76
SF3A3-201ENST00000373019 METTL22Q9BUU2 404 aaPredicted RBP10.3□□□□□ -0.76
SF3A3-201ENST00000373019 KRT82Q9NSB4 513 aa10.3□□□□□ -0.76
SF3A3-201ENST00000373019 DDX43Q9NXZ2 648 aaKnown RBP10.3□□□□□ -0.76
SF3A3-201ENST00000373019 KLHL14Q9P2G3 628 aa10.3□□□□□ -0.76
SF3A3-201ENST00000373019 TMEM98Q9Y2Y6 226 aa10.3□□□□□ -0.76
SF3A3-201ENST00000373019 CHD4Q14839 1912 aa10.3□□□□□ -0.76
SF3A3-201ENST00000373019 A0A087X0T9 212 aa10.3□□□□□ -0.76
SF3A3-201ENST00000373019 FAM228BP0C875 321 aa10.3□□□□□ -0.76
SF3A3-201ENST00000373019 CCNE1P24864 410 aa10.3□□□□□ -0.76
SF3A3-201ENST00000373019 CASP7P55210 303 aa10.3□□□□□ -0.76
SF3A3-201ENST00000373019 VWA3BQ502W6 1294 aa10.3□□□□□ -0.76
SF3A3-201ENST00000373019 DENND2CQ68D51 928 aa10.3□□□□□ -0.76
SF3A3-201ENST00000373019 ZDHHC24Q6UX98 284 aa10.3□□□□□ -0.76
SF3A3-201ENST00000373019 RASGEF1CQ8N431 466 aa10.3□□□□□ -0.76
SF3A3-201ENST00000373019 TMEM109Q9BVC6 243 aa10.3□□□□□ -0.76
SF3A3-201ENST00000373019 UTP11Q9Y3A2 253 aaKnown RBP10.3□□□□□ -0.76
SF3A3-201ENST00000373019 USH1CQ9Y6N9 552 aa10.3□□□□□ -0.76
SF3A3-201ENST00000373019 LTN1O94822 1766 aa10.3□□□□□ -0.76
SF3A3-201ENST00000373019 TBX10O75333 385 aa10.3□□□□□ -0.76
SF3A3-201ENST00000373019 ZFYP08048 801 aaPredicted RBP10.3□□□□□ -0.76
SF3A3-201ENST00000373019 NEK3P51956 506 aa10.3□□□□□ -0.76
SF3A3-201ENST00000373019 HPCAP84074 193 aa10.3□□□□□ -0.76
SF3A3-201ENST00000373019 KPNB1Q14974 876 aaKnown RBP10.3□□□□□ -0.76
SF3A3-201ENST00000373019 LRRC24Q50LG9 513 aa10.3□□□□□ -0.76
SF3A3-201ENST00000373019 DUPD1Q68J44 220 aa10.3□□□□□ -0.76
SF3A3-201ENST00000373019 LMBR1LQ6UX01 489 aa10.3□□□□□ -0.76
SF3A3-201ENST00000373019 C4orf50Q6ZRC1 276 aa10.3□□□□□ -0.76
SF3A3-201ENST00000373019 UHMK1Q8TAS1 419 aaKnown RBP10.3□□□□□ -0.76
SF3A3-201ENST00000373019 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.3□□□□□ -0.76
SF3A3-201ENST00000373019 TAF4BQ92750 862 aa10.3□□□□□ -0.76
SF3A3-201ENST00000373019 ERP27Q96DN0 273 aa10.3□□□□□ -0.76
SF3A3-201ENST00000373019 CLMNQ96JQ2 1002 aa10.3□□□□□ -0.76
SF3A3-201ENST00000373019 CNOT7Q9UIV1 285 aaKnown RBP10.3□□□□□ -0.76
SF3A3-201ENST00000373019 EP400Q96L91 3159 aa10.3□□□□□ -0.76
SF3A3-201ENST00000373019 NPHP3-ACAD11A0A0J9YXS1 232 aa10.29□□□□□ -0.76
SF3A3-201ENST00000373019 TMEM120BA0PK00 339 aa10.29□□□□□ -0.76
SF3A3-201ENST00000373019 FOXO6A8MYZ6 492 aa10.29□□□□□ -0.76
SF3A3-201ENST00000373019 TRAFD1O14545 582 aaPredicted RBP10.29□□□□□ -0.76
SF3A3-201ENST00000373019 PLSCR1O15162 318 aa10.29□□□□□ -0.76
SF3A3-201ENST00000373019 ONECUT3O60422 494 aaPredicted RBP10.29□□□□□ -0.76
SF3A3-201ENST00000373019 SUPT3HO75486 399 aa10.29□□□□□ -0.76
SF3A3-201ENST00000373019 EYA4O95677 639 aa10.29□□□□□ -0.76
SF3A3-201ENST00000373019 NEXNQ0ZGT2 675 aa10.29□□□□□ -0.76
SF3A3-201ENST00000373019 STK4Q13043 487 aa10.29□□□□□ -0.76
SF3A3-201ENST00000373019 GSTA3Q16772 222 aa10.29□□□□□ -0.76
SF3A3-201ENST00000373019 RTN1Q16799 776 aa10.29□□□□□ -0.76
SF3A3-201ENST00000373019 TDRD12Q587J7 1177 aaKnown RBP10.29□□□□□ -0.76
SF3A3-201ENST00000373019 TTC38Q5R3I4 469 aa10.29□□□□□ -0.76
SF3A3-201ENST00000373019 DSTYKQ6XUX3 929 aa10.29□□□□□ -0.76
SF3A3-201ENST00000373019 CCDC125Q86Z20 511 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 991 ms