RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 ARHGAP25P42331 645 aa27.37■■□□□ 1.97
CTSA-203ENST00000372459 CYP2J2P51589 502 aa27.37■■□□□ 1.97
CTSA-203ENST00000372459 NCKAP1LP55160 1127 aa27.37■■□□□ 1.97
CTSA-203ENST00000372459 PEX3P56589 373 aa27.37■■□□□ 1.97
CTSA-203ENST00000372459 POLR2FP61218 127 aaKnown RBP27.37■■□□□ 1.97
CTSA-203ENST00000372459 GTF2BQ00403 316 aa27.37■■□□□ 1.97
CTSA-203ENST00000372459 CYFIP1Q7L576 1253 aa27.37■■□□□ 1.97
CTSA-203ENST00000372459 HAUS6Q7Z4H7 955 aa27.37■■□□□ 1.97
CTSA-203ENST00000372459 SYN2Q92777 582 aaPredicted RBP27.37■■□□□ 1.97
CTSA-203ENST00000372459 MPHOSPH6Q99547 160 aaKnown RBP27.37■■□□□ 1.97
CTSA-203ENST00000372459 TXNRD2Q9NNW7 524 aa27.37■■□□□ 1.97
CTSA-203ENST00000372459 NLRC4Q9NPP4 1024 aa27.37■■□□□ 1.97
CTSA-203ENST00000372459 MYO1AQ9UBC5 1043 aa27.37■■□□□ 1.97
CTSA-203ENST00000372459 TELO2Q9Y4R8 837 aa27.37■■□□□ 1.97
CTSA-203ENST00000372459 UNCXA6NJT0 531 aa27.37■■□□□ 1.97
CTSA-203ENST00000372459 SORBS3O60504 671 aa27.37■■□□□ 1.97
CTSA-203ENST00000372459 PRKCEQ02156 737 aa27.37■■□□□ 1.97
CTSA-203ENST00000372459 KIFAP3Q92845 792 aa27.37■■□□□ 1.97
CTSA-203ENST00000372459 HAUS4Q9H6D7 363 aa27.37■■□□□ 1.97
CTSA-203ENST00000372459 PLCB1Q9NQ66 1216 aa27.37■■□□□ 1.97
CTSA-203ENST00000372459 ARHGAP20Q9P2F6 1191 aa27.37■■□□□ 1.97
CTSA-203ENST00000372459 GJA5P36382 358 aa27.36■■□□□ 1.97
CTSA-203ENST00000372459 SMTNP53814 917 aa27.36■■□□□ 1.97
CTSA-203ENST00000372459 EXOC3L4Q17RC7 722 aa27.36■■□□□ 1.97
CTSA-203ENST00000372459 ZNF662Q6ZS27 426 aa27.36■■□□□ 1.97
CTSA-203ENST00000372459 C17orf75Q9HAS0 396 aa27.36■■□□□ 1.97
CTSA-203ENST00000372459 SEPT9Q9UHD8 586 aaPredicted RBP27.36■■□□□ 1.97
CTSA-203ENST00000372459 IGSF9BQ9UPX0 1349 aa27.36■■□□□ 1.97
CTSA-203ENST00000372459 DGAT1O75907 488 aa27.35■■□□□ 1.97
CTSA-203ENST00000372459 ATG7O95352 703 aa27.35■■□□□ 1.97
CTSA-203ENST00000372459 TMEM174Q8WUU8 243 aa27.35■■□□□ 1.97
CTSA-203ENST00000372459 GANQ9H2C0 597 aa27.35■■□□□ 1.97
CTSA-203ENST00000372459 GTPBP10A4D1E9 387 aaKnown RBP27.35■■□□□ 1.97
CTSA-203ENST00000372459 SNRPFP62306 86 aaKnown RBP27.35■■□□□ 1.97
CTSA-203ENST00000372459 DMP1Q13316 513 aaPredicted RBP27.35■■□□□ 1.97
CTSA-203ENST00000372459 Q3C1V9 767 aa27.35■■□□□ 1.97
CTSA-203ENST00000372459 XKR3Q5GH77 459 aa27.35■■□□□ 1.97
CTSA-203ENST00000372459 ZNF569Q5MCW4 686 aa27.35■■□□□ 1.97
CTSA-203ENST00000372459 SFMBT2Q5VUG0 894 aa27.35■■□□□ 1.97
CTSA-203ENST00000372459 GBP6Q6ZN66 633 aa27.35■■□□□ 1.97
CTSA-203ENST00000372459 KIAA1328Q86T90 577 aa27.35■■□□□ 1.97
CTSA-203ENST00000372459 ERO1AQ96HE7 468 aa27.35■■□□□ 1.97
CTSA-203ENST00000372459 DEF6Q9H4E7 631 aa27.35■■□□□ 1.97
CTSA-203ENST00000372459 ZNF215Q9UL58 517 aaPredicted RBP27.35■■□□□ 1.97
CTSA-203ENST00000372459 ARID2Q68CP9 1835 aa27.34■■□□□ 1.97
CTSA-203ENST00000372459 SLC16A4O15374 487 aa27.34■■□□□ 1.97
CTSA-203ENST00000372459 EXOC3O60645 756 aa27.34■■□□□ 1.97
CTSA-203ENST00000372459 SPA17Q15506 151 aa27.34■■□□□ 1.97
CTSA-203ENST00000372459 C12orf56Q8IXR9 622 aa27.34■■□□□ 1.97
CTSA-203ENST00000372459 MCPH1Q8NEM0 835 aa27.34■■□□□ 1.97
CTSA-203ENST00000372459 ZNF302Q9NR11 478 aa27.34■■□□□ 1.97
CTSA-203ENST00000372459 CYP26B1Q9NR63 512 aa27.34■■□□□ 1.97
CTSA-203ENST00000372459 PLEKP08567 350 aaPredicted RBP27.33■■□□□ 1.97
CTSA-203ENST00000372459 UBA1P22314 1058 aaKnown RBP27.33■■□□□ 1.97
CTSA-203ENST00000372459 PPP2R5AQ15172 486 aa27.33■■□□□ 1.97
CTSA-203ENST00000372459 ZNF408Q9H9D4 720 aa27.33■■□□□ 1.97
CTSA-203ENST00000372459 PNMA3Q9UL41 463 aa27.33■■□□□ 1.97
CTSA-203ENST00000372459 SYNGAP1Q96PV0 1343 aa27.33■■□□□ 1.97
CTSA-203ENST00000372459 ABL1P00519 1130 aa27.33■■□□□ 1.97
CTSA-203ENST00000372459 TGFB3P10600 412 aa27.33■■□□□ 1.97
CTSA-203ENST00000372459 SLC9A1P19634 815 aa27.33■■□□□ 1.97
CTSA-203ENST00000372459 PON1P27169 355 aa27.33■■□□□ 1.97
CTSA-203ENST00000372459 NEDD9Q14511 834 aa27.33■■□□□ 1.97
CTSA-203ENST00000372459 KCTD2Q14681 263 aa27.33■■□□□ 1.97
CTSA-203ENST00000372459 HVCN1Q96D96 273 aa27.33■■□□□ 1.97
CTSA-203ENST00000372459 MMP19Q99542 508 aa27.33■■□□□ 1.97
CTSA-203ENST00000372459 MROH8Q9H579 483 aa27.33■■□□□ 1.97
CTSA-203ENST00000372459 EXOC7Q9UPT5 735 aa27.33■■□□□ 1.97
CTSA-203ENST00000372459 MAFBQ9Y5Q3 323 aaPredicted RBP27.33■■□□□ 1.97
CTSA-203ENST00000372459 SSU72P8A0A1W2PR75 194 aa27.32■■□□□ 1.96
CTSA-203ENST00000372459 CCDC169A6NNP5 214 aa27.32■■□□□ 1.96
CTSA-203ENST00000372459 EIF4A3P38919 411 aaKnown RBP27.32■■□□□ 1.96
CTSA-203ENST00000372459 NPTX2P47972 431 aa27.32■■□□□ 1.96
CTSA-203ENST00000372459 SLC9C1Q4G0N8 1177 aa27.32■■□□□ 1.96
CTSA-203ENST00000372459 GTF3C2Q8WUA4 911 aaPredicted RBP27.32■■□□□ 1.96
CTSA-203ENST00000372459 SPIRE2Q8WWL2 714 aa27.32■■□□□ 1.96
CTSA-203ENST00000372459 R3HDMLQ9H3Y0 253 aa27.32■■□□□ 1.96
CTSA-203ENST00000372459 ATP6V0A4Q9HBG4 840 aa27.32■■□□□ 1.96
CTSA-203ENST00000372459 PDLIM7Q9NR12 457 aa27.32■■□□□ 1.96
CTSA-203ENST00000372459 MYH9P35579 1960 aaKnown RBP27.31■■□□□ 1.96
CTSA-203ENST00000372459 KRT86O43790 486 aa27.31■■□□□ 1.96
CTSA-203ENST00000372459 KIF11P52732 1056 aa27.31■■□□□ 1.96
CTSA-203ENST00000372459 APBA1Q02410 837 aa27.31■■□□□ 1.96
CTSA-203ENST00000372459 MAPK8IP2Q13387 824 aaPredicted RBP27.31■■□□□ 1.96
CTSA-203ENST00000372459 CCDC122Q5T0U0 273 aa27.31■■□□□ 1.96
CTSA-203ENST00000372459 KLHDC7AQ5VTJ3 777 aa27.31■■□□□ 1.96
CTSA-203ENST00000372459 MAP1SQ66K74 1059 aaPredicted RBP27.31■■□□□ 1.96
CTSA-203ENST00000372459 JAKMIP2Q96AA8 810 aa27.31■■□□□ 1.96
CTSA-203ENST00000372459 GUCA1BQ9UMX6 200 aa27.31■■□□□ 1.96
CTSA-203ENST00000372459 AKR1B10O60218 316 aa27.31■■□□□ 1.96
CTSA-203ENST00000372459 FARP2O94887 1054 aaPredicted RBP27.31■■□□□ 1.96
CTSA-203ENST00000372459 LCA5LO95447 670 aa27.31■■□□□ 1.96
CTSA-203ENST00000372459 SERPING1P05155 500 aa27.31■■□□□ 1.96
CTSA-203ENST00000372459 POTEJP0CG39 1038 aa27.31■■□□□ 1.96
CTSA-203ENST00000372459 DPY19L2P1Q6NXN4 242 aa27.31■■□□□ 1.96
CTSA-203ENST00000372459 TMEM161BQ8NDZ6 487 aa27.31■■□□□ 1.96
CTSA-203ENST00000372459 NTPCRQ9BSD7 190 aaKnown RBP27.31■■□□□ 1.96
CTSA-203ENST00000372459 KMT5AQ9NQR1 393 aa27.31■■□□□ 1.96
CTSA-203ENST00000372459 GCNT4Q9P109 453 aa27.31■■□□□ 1.96
CTSA-203ENST00000372459 PGK2P07205 417 aa27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms