RNA–Protein interactions for RNA: ENST00000371123.5

SMARCA1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-203ENST00000371123 VSTM1Q6UX27 236 aa9.47□□□□□ -0.89
SMARCA1-203ENST00000371123 RPUSD2Q8IZ73 545 aaKnown RBP9.47□□□□□ -0.89
SMARCA1-203ENST00000371123 SH3RF3Q8TEJ3 882 aaPredicted RBP9.47□□□□□ -0.89
SMARCA1-203ENST00000371123 KIFAP3Q92845 792 aa9.47□□□□□ -0.89
SMARCA1-203ENST00000371123 SLC7A6OSQ96CW6 309 aaPredicted RBP9.47□□□□□ -0.89
SMARCA1-203ENST00000371123 RBM17Q96I25 401 aaKnown RBP9.47□□□□□ -0.89
SMARCA1-203ENST00000371123 FGFBP2Q9BYJ0 223 aa9.47□□□□□ -0.89
SMARCA1-203ENST00000371123 DLGAP2Q9P1A6 1054 aa9.47□□□□□ -0.89
SMARCA1-203ENST00000371123 AJAP1Q9UKB5 411 aaPredicted RBP9.47□□□□□ -0.89
SMARCA1-203ENST00000371123 USP20Q9Y2K6 914 aa9.47□□□□□ -0.89
SMARCA1-203ENST00000371123 STXBP5LQ9Y2K9 1186 aa9.47□□□□□ -0.89
SMARCA1-203ENST00000371123 ANKRD63C9JTQ0 380 aa9.47□□□□□ -0.89
SMARCA1-203ENST00000371123 ENTPD5O75356 428 aa9.47□□□□□ -0.89
SMARCA1-203ENST00000371123 GNA14O95837 355 aa9.47□□□□□ -0.89
SMARCA1-203ENST00000371123 CSF1RP07333 972 aa9.47□□□□□ -0.89
SMARCA1-203ENST00000371123 KLRK1P26718 216 aa9.47□□□□□ -0.89
SMARCA1-203ENST00000371123 ALDH1B1P30837 517 aa9.47□□□□□ -0.89
SMARCA1-203ENST00000371123 SLC35G1Q2M3R5 365 aa9.47□□□□□ -0.89
SMARCA1-203ENST00000371123 SEPT14Q6ZU15 432 aa9.47□□□□□ -0.89
SMARCA1-203ENST00000371123 FAM13CQ8NE31 585 aa9.47□□□□□ -0.89
SMARCA1-203ENST00000371123 CCHCR1Q8TD31 782 aa9.47□□□□□ -0.89
SMARCA1-203ENST00000371123 ASAP3Q8TDY4 903 aa9.47□□□□□ -0.89
SMARCA1-203ENST00000371123 SETDB2Q96T68 719 aa9.47□□□□□ -0.89
SMARCA1-203ENST00000371123 DDX50Q9BQ39 737 aaKnown RBP9.47□□□□□ -0.89
SMARCA1-203ENST00000371123 PCDHA3Q9Y5H8 950 aa9.47□□□□□ -0.89
SMARCA1-203ENST00000371123 PAPPAQ13219 1627 aa9.47□□□□□ -0.89
SMARCA1-203ENST00000371123 NPHP3-ACAD11A0A0J9YXS1 232 aa9.47□□□□□ -0.89
SMARCA1-203ENST00000371123 PTDSS1P48651 473 aaKnown RBP9.47□□□□□ -0.89
SMARCA1-203ENST00000371123 UBE2SQ16763 222 aa9.47□□□□□ -0.89
SMARCA1-203ENST00000371123 ZNF568Q3ZCX4 644 aa9.47□□□□□ -0.89
SMARCA1-203ENST00000371123 RBM26Q5T8P6 1007 aaKnown RBP9.47□□□□□ -0.89
SMARCA1-203ENST00000371123 ZBTB38Q8NAP3 1195 aaPredicted RBP9.47□□□□□ -0.89
SMARCA1-203ENST00000371123 PNMA1Q8ND90 353 aa9.47□□□□□ -0.89
SMARCA1-203ENST00000371123 ZSCAN10Q96SZ4 725 aaPredicted RBP9.47□□□□□ -0.89
SMARCA1-203ENST00000371123 DISC1Q9NRI5 854 aa9.47□□□□□ -0.89
SMARCA1-203ENST00000371123 ZNF510Q9Y2H8 683 aa9.47□□□□□ -0.89
SMARCA1-203ENST00000371123 TAL1P17542 331 aaPredicted RBP9.46□□□□□ -0.89
SMARCA1-203ENST00000371123 SLCO1A2P46721 670 aa9.46□□□□□ -0.89
SMARCA1-203ENST00000371123 BPIFB4P59827 614 aa9.46□□□□□ -0.89
SMARCA1-203ENST00000371123 LBRQ14739 615 aaKnown RBP9.46□□□□□ -0.89
SMARCA1-203ENST00000371123 ADGRA1Q86SQ6 560 aa9.46□□□□□ -0.89
SMARCA1-203ENST00000371123 EXOC3L1Q86VI1 746 aa9.46□□□□□ -0.89
SMARCA1-203ENST00000371123 SNX29Q8TEQ0 813 aa9.46□□□□□ -0.89
SMARCA1-203ENST00000371123 FERMT2Q96AC1 680 aa9.46□□□□□ -0.89
SMARCA1-203ENST00000371123 SEMA4AQ9H3S1 761 aa9.46□□□□□ -0.89
SMARCA1-203ENST00000371123 GSTTP1A0A1W2PQM5 241 aa9.46□□□□□ -0.9
SMARCA1-203ENST00000371123 KIF5BP33176 963 aa9.46□□□□□ -0.9
SMARCA1-203ENST00000371123 DOK7Q18PE1 504 aa9.46□□□□□ -0.9
SMARCA1-203ENST00000371123 ARFGAP2Q8N6H7 521 aa9.46□□□□□ -0.9
SMARCA1-203ENST00000371123 GLG1Q92896 1179 aa9.46□□□□□ -0.9
SMARCA1-203ENST00000371123 P2RX5Q93086 422 aa9.46□□□□□ -0.9
SMARCA1-203ENST00000371123 NOX5Q96PH1 765 aa9.46□□□□□ -0.9
SMARCA1-203ENST00000371123 TMEM260Q9NX78 707 aa9.46□□□□□ -0.9
SMARCA1-203ENST00000371123 ARPP21Q9UBL0 812 aaPredicted RBP9.46□□□□□ -0.9
SMARCA1-203ENST00000371123 CTNNAL1Q9UBT7 734 aa9.46□□□□□ -0.9
SMARCA1-203ENST00000371123 NOC2LQ9Y3T9 749 aaKnown RBP9.46□□□□□ -0.9
SMARCA1-203ENST00000371123 SMCO2A6NFE2 343 aa9.46□□□□□ -0.9
SMARCA1-203ENST00000371123 POTEMA6NI47 508 aa9.46□□□□□ -0.9
SMARCA1-203ENST00000371123 KCNK3O14649 394 aa9.46□□□□□ -0.9
SMARCA1-203ENST00000371123 IMPDH2P12268 514 aa9.46□□□□□ -0.9
SMARCA1-203ENST00000371123 MXRA7P84157 204 aa9.46□□□□□ -0.9
SMARCA1-203ENST00000371123 PLOD1Q02809 727 aaPredicted RBP9.46□□□□□ -0.9
SMARCA1-203ENST00000371123 ERFEQ4G0M1 354 aa9.46□□□□□ -0.9
SMARCA1-203ENST00000371123 SRBD1Q8N5C6 995 aaKnown RBP9.46□□□□□ -0.9
SMARCA1-203ENST00000371123 ANKS1AQ92625 1134 aa9.46□□□□□ -0.9
SMARCA1-203ENST00000371123 ZNF333Q96JL9 665 aa9.46□□□□□ -0.9
SMARCA1-203ENST00000371123 RNPEPL1Q9HAU8 725 aa9.46□□□□□ -0.9
SMARCA1-203ENST00000371123 CTDP1Q9Y5B0 961 aaPredicted RBP9.46□□□□□ -0.9
SMARCA1-203ENST00000371123 TCP11X1B4DZS4 312 aa9.45□□□□□ -0.9
SMARCA1-203ENST00000371123 CETPP11597 493 aa9.45□□□□□ -0.9
SMARCA1-203ENST00000371123 HIBADHP31937 336 aaKnown RBP9.45□□□□□ -0.9
SMARCA1-203ENST00000371123 POLE2P56282 527 aa9.45□□□□□ -0.9
SMARCA1-203ENST00000371123 POLR2FP61218 127 aaKnown RBP9.45□□□□□ -0.9
SMARCA1-203ENST00000371123 MTM1Q13496 603 aa9.45□□□□□ -0.9
SMARCA1-203ENST00000371123 SLC29A2Q14542 456 aa9.45□□□□□ -0.9
SMARCA1-203ENST00000371123 VWA3BQ502W6 1294 aa9.45□□□□□ -0.9
SMARCA1-203ENST00000371123 DUS1LQ6P1R4 473 aaKnown RBP9.45□□□□□ -0.9
SMARCA1-203ENST00000371123 LRRC55Q6ZSA7 311 aa9.45□□□□□ -0.9
SMARCA1-203ENST00000371123 DPH6Q7L8W6 267 aa9.45□□□□□ -0.9
SMARCA1-203ENST00000371123 CABP7Q86V35 215 aa9.45□□□□□ -0.9
SMARCA1-203ENST00000371123 CELF1Q92879 486 aaKnown RBP9.45□□□□□ -0.9
SMARCA1-203ENST00000371123 ELMO3Q96BJ8 720 aa9.45□□□□□ -0.9
SMARCA1-203ENST00000371123 KLHL29Q96CT2 875 aa9.45□□□□□ -0.9
SMARCA1-203ENST00000371123 MIPEPQ99797 713 aa9.45□□□□□ -0.9
SMARCA1-203ENST00000371123 NMRK1Q9NWW6 199 aa9.45□□□□□ -0.9
SMARCA1-203ENST00000371123 GRHL1Q9NZI5 618 aa9.45□□□□□ -0.9
SMARCA1-203ENST00000371123 COL5A2P05997 1499 aaPredicted RBP9.45□□□□□ -0.9
SMARCA1-203ENST00000371123 SBF2Q86WG5 1849 aa9.45□□□□□ -0.9
SMARCA1-203ENST00000371123 GOLGA6L10A0A0M3HER8 536 aa9.45□□□□□ -0.9
SMARCA1-203ENST00000371123 H0Y3Z8 333 aa9.45□□□□□ -0.9
SMARCA1-203ENST00000371123 M0R2N6 131 aa9.45□□□□□ -0.9
SMARCA1-203ENST00000371123 CLIC2O15247 247 aa9.45□□□□□ -0.9
SMARCA1-203ENST00000371123 FGFR1P11362 822 aa9.45□□□□□ -0.9
SMARCA1-203ENST00000371123 ETS2P15036 469 aa9.45□□□□□ -0.9
SMARCA1-203ENST00000371123 CALB2P22676 271 aa9.45□□□□□ -0.9
SMARCA1-203ENST00000371123 RAD23BP54727 409 aa9.45□□□□□ -0.9
SMARCA1-203ENST00000371123 TNIP1Q15025 636 aa9.45□□□□□ -0.9
SMARCA1-203ENST00000371123 ANKRD23Q86SG2 305 aa9.45□□□□□ -0.9
SMARCA1-203ENST00000371123 SYCP3Q8IZU3 236 aa9.45□□□□□ -0.9
SMARCA1-203ENST00000371123 VGLL2Q8N8G2 317 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms