RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 PASD1Q8IV76 773 aa9.14□□□□□ -0.95
PTPRK-206ENST00000368215 ZBTB8OSQ8IWT0 167 aa9.14□□□□□ -0.95
PTPRK-206ENST00000368215 CDAN1Q8IWY9 1227 aa9.14□□□□□ -0.95
PTPRK-206ENST00000368215 SYT2Q8N9I0 419 aaPredicted RBP9.14□□□□□ -0.95
PTPRK-206ENST00000368215 WHAMMQ8TF30 809 aa9.14□□□□□ -0.95
PTPRK-206ENST00000368215 FMO2Q99518 471 aa9.14□□□□□ -0.95
PTPRK-206ENST00000368215 VPS37BQ9H9H4 285 aa9.14□□□□□ -0.95
PTPRK-206ENST00000368215 TUFT1Q9NNX1 390 aa9.14□□□□□ -0.95
PTPRK-206ENST00000368215 PODXL2Q9NZ53 605 aa9.14□□□□□ -0.95
PTPRK-206ENST00000368215 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.14□□□□□ -0.95
PTPRK-206ENST00000368215 SEL1LQ9UBV2 794 aa9.14□□□□□ -0.95
PTPRK-206ENST00000368215 SRGAP2CP0DJJ0 459 aa9.14□□□□□ -0.95
PTPRK-206ENST00000368215 FMO5P49326 533 aa9.14□□□□□ -0.95
PTPRK-206ENST00000368215 IRX5P78411 483 aaPredicted RBP9.14□□□□□ -0.95
PTPRK-206ENST00000368215 TFAMQ00059 246 aaKnown RBP9.14□□□□□ -0.95
PTPRK-206ENST00000368215 CLUL1Q15846 466 aa9.14□□□□□ -0.95
PTPRK-206ENST00000368215 ALS2CLQ60I27 953 aa9.14□□□□□ -0.95
PTPRK-206ENST00000368215 RSRC2Q7L4I2 434 aaKnown RBP9.14□□□□□ -0.95
PTPRK-206ENST00000368215 C4orf32Q8N8J7 132 aa9.14□□□□□ -0.95
PTPRK-206ENST00000368215 CERKQ8TCT0 537 aa9.14□□□□□ -0.95
PTPRK-206ENST00000368215 FAM151AQ8WW52 585 aa9.14□□□□□ -0.95
PTPRK-206ENST00000368215 RPAP3Q9H6T3 665 aaPredicted RBP9.14□□□□□ -0.95
PTPRK-206ENST00000368215 ANKZF1Q9H8Y5 726 aa9.14□□□□□ -0.95
PTPRK-206ENST00000368215 NRBP2Q9NSY0 501 aa9.14□□□□□ -0.95
PTPRK-206ENST00000368215 ZNF446Q9NWS9 450 aa9.14□□□□□ -0.95
PTPRK-206ENST00000368215 PARP2Q9UGN5 583 aa9.14□□□□□ -0.95
PTPRK-206ENST00000368215 ZNF148Q9UQR1 794 aa9.14□□□□□ -0.95
PTPRK-206ENST00000368215 CAPN7Q9Y6W3 813 aa9.14□□□□□ -0.95
PTPRK-206ENST00000368215 PASKQ96RG2 1323 aa9.14□□□□□ -0.95
PTPRK-206ENST00000368215 K7ERI5 159 aa9.13□□□□□ -0.95
PTPRK-206ENST00000368215 PSAPP07602 524 aa9.13□□□□□ -0.95
PTPRK-206ENST00000368215 KRT15P19012 456 aa9.13□□□□□ -0.95
PTPRK-206ENST00000368215 HMGCS2P54868 508 aa9.13□□□□□ -0.95
PTPRK-206ENST00000368215 NPEPPSP55786 919 aa9.13□□□□□ -0.95
PTPRK-206ENST00000368215 MKRN4PQ13434 485 aaPredicted RBP9.13□□□□□ -0.95
PTPRK-206ENST00000368215 GIT2Q14161 759 aa9.13□□□□□ -0.95
PTPRK-206ENST00000368215 MIS18BP1Q6P0N0 1132 aa9.13□□□□□ -0.95
PTPRK-206ENST00000368215 TMEM139Q8IV31 216 aa9.13□□□□□ -0.95
PTPRK-206ENST00000368215 SH2D3CQ8N5H7 860 aa9.13□□□□□ -0.95
PTPRK-206ENST00000368215 GIMAP7Q8NHV1 300 aa9.13□□□□□ -0.95
PTPRK-206ENST00000368215 TBC1D22BQ9NU19 505 aa9.13□□□□□ -0.95
PTPRK-206ENST00000368215 NXF1Q9UBU9 619 aaKnown RBP9.13□□□□□ -0.95
PTPRK-206ENST00000368215 PITPNM2Q9BZ72 1349 aa9.13□□□□□ -0.95
PTPRK-206ENST00000368215 ZNF233A6NK53 670 aa9.13□□□□□ -0.95
PTPRK-206ENST00000368215 GOLGA8SH3BPF8 625 aa9.13□□□□□ -0.95
PTPRK-206ENST00000368215 ARP10275 920 aa9.13□□□□□ -0.95
PTPRK-206ENST00000368215 GLE1Q53GS7 698 aaKnown RBP9.13□□□□□ -0.95
PTPRK-206ENST00000368215 EAPPQ56P03 285 aaPredicted RBP9.13□□□□□ -0.95
PTPRK-206ENST00000368215 KLHDC7AQ5VTJ3 777 aa9.13□□□□□ -0.95
PTPRK-206ENST00000368215 SCARA5Q6ZMJ2 495 aa9.13□□□□□ -0.95
PTPRK-206ENST00000368215 AMIGO3Q86WK7 504 aa9.13□□□□□ -0.95
PTPRK-206ENST00000368215 PPP1R14CQ8TAE6 165 aa9.13□□□□□ -0.95
PTPRK-206ENST00000368215 MTMR9Q96QG7 549 aa9.13□□□□□ -0.95
PTPRK-206ENST00000368215 IVNS1ABPQ9Y6Y0 642 aa9.13□□□□□ -0.95
PTPRK-206ENST00000368215 FAM86B1E9PN63 330 aa9.13□□□□□ -0.95
PTPRK-206ENST00000368215 H0YCG3 227 aa9.13□□□□□ -0.95
PTPRK-206ENST00000368215 FAM86B2P0C5J1 330 aa9.13□□□□□ -0.95
PTPRK-206ENST00000368215 YWHABP31946 246 aaKnown RBP9.13□□□□□ -0.95
PTPRK-206ENST00000368215 CARSP49589 748 aaKnown RBP9.13□□□□□ -0.95
PTPRK-206ENST00000368215 IFT88Q13099 833 aa9.13□□□□□ -0.95
PTPRK-206ENST00000368215 BAATQ14032 418 aaPredicted RBP9.13□□□□□ -0.95
PTPRK-206ENST00000368215 TAOK1Q7L7X3 1001 aa9.13□□□□□ -0.95
PTPRK-206ENST00000368215 SULF1Q8IWU6 871 aa9.13□□□□□ -0.95
PTPRK-206ENST00000368215 PPM1EQ8WY54 764 aa9.13□□□□□ -0.95
PTPRK-206ENST00000368215 MED15Q96RN5 788 aa9.13□□□□□ -0.95
PTPRK-206ENST00000368215 DNAI2Q9GZS0 605 aa9.13□□□□□ -0.95
PTPRK-206ENST00000368215 PLCB1Q9NQ66 1216 aa9.13□□□□□ -0.95
PTPRK-206ENST00000368215 RAB20Q9NX57 234 aa9.13□□□□□ -0.95
PTPRK-206ENST00000368215 CNOT8Q9UFF9 292 aaKnown RBP9.13□□□□□ -0.95
PTPRK-206ENST00000368215 FEZ2Q9UHY8 353 aaPredicted RBP9.13□□□□□ -0.95
PTPRK-206ENST00000368215 DMGDHQ9UI17 866 aaKnown RBP9.13□□□□□ -0.95
PTPRK-206ENST00000368215 GAKO14976 1311 aa9.13□□□□□ -0.95
PTPRK-206ENST00000368215 TARSL2A2RTX5 802 aaKnown RBP9.13□□□□□ -0.95
PTPRK-206ENST00000368215 ZBTB39O15060 712 aa9.13□□□□□ -0.95
PTPRK-206ENST00000368215 EPHB6O15197 1021 aa9.13□□□□□ -0.95
PTPRK-206ENST00000368215 CYP26A1O43174 497 aa9.13□□□□□ -0.95
PTPRK-206ENST00000368215 DAPK3O43293 454 aa9.13□□□□□ -0.95
PTPRK-206ENST00000368215 SASH3O75995 380 aa9.13□□□□□ -0.95
PTPRK-206ENST00000368215 ARHGAP25P42331 645 aa9.13□□□□□ -0.95
PTPRK-206ENST00000368215 LACTBP83111 547 aaPredicted RBP9.13□□□□□ -0.95
PTPRK-206ENST00000368215 PAXIP1Q6ZW49 1069 aaPredicted RBP9.13□□□□□ -0.95
PTPRK-206ENST00000368215 DDX42Q86XP3 938 aaKnown RBP eCLIP9.13□□□□□ -0.95
PTPRK-206ENST00000368215 RHOT2Q8IXI1 618 aa9.13□□□□□ -0.95
PTPRK-206ENST00000368215 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.13□□□□□ -0.95
PTPRK-206ENST00000368215 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.13□□□□□ -0.951e-6■□□□□ 8.7
PTPRK-206ENST00000368215 HEMGNQ9BXL5 484 aa9.13□□□□□ -0.95
PTPRK-206ENST00000368215 KCNG1Q9UIX4 513 aa9.13□□□□□ -0.95
PTPRK-206ENST00000368215 ANAPC7Q9UJX3 599 aa9.13□□□□□ -0.95
PTPRK-206ENST00000368215 ZNRF3Q9ULT6 936 aa9.13□□□□□ -0.95
PTPRK-206ENST00000368215 ARFGEF2Q9Y6D5 1785 aa9.13□□□□□ -0.95
PTPRK-206ENST00000368215 CCDC188H7C350 402 aa9.12□□□□□ -0.95
PTPRK-206ENST00000368215 AKAP3O75969 853 aa9.12□□□□□ -0.95
PTPRK-206ENST00000368215 ATF2P15336 505 aa9.12□□□□□ -0.95
PTPRK-206ENST00000368215 HOXA10P31260 410 aaPredicted RBP9.12□□□□□ -0.95
PTPRK-206ENST00000368215 JAK3P52333 1124 aa9.12□□□□□ -0.95
PTPRK-206ENST00000368215 PSMC5P62195 406 aa9.12□□□□□ -0.95
PTPRK-206ENST00000368215 GPC5P78333 572 aa9.12□□□□□ -0.95
PTPRK-206ENST00000368215 ZBTB16Q05516 673 aa9.12□□□□□ -0.95
PTPRK-206ENST00000368215 ALCAMQ13740 583 aa9.12□□□□□ -0.95
PTPRK-206ENST00000368215 CYP4F22Q6NT55 531 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms