RNA–Protein interactions for RNA: ENST00000336057.9

HDAC5-202, Transcript of histone deacetylase 5, humanhuman

TSL 1 (best) BASIC

Gene HDAC5, Length 5,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-202ENST00000336057 GMNCA6NCL1 334 aa16.9■□□□□ 0.3
HDAC5-202ENST00000336057 WDR64B1ANS9 1081 aa16.9■□□□□ 0.3
HDAC5-202ENST00000336057 P4HBP07237 508 aaKnown RBP16.9■□□□□ 0.3
HDAC5-202ENST00000336057 GARSP41250 739 aaKnown RBP16.9■□□□□ 0.3
HDAC5-202ENST00000336057 SCYL3Q8IZE3 742 aa16.9■□□□□ 0.3
HDAC5-202ENST00000336057 SLIT1O75093 1534 aa16.9■□□□□ 0.3
HDAC5-202ENST00000336057 SLC16A4O15374 487 aa16.9■□□□□ 0.3
HDAC5-202ENST00000336057 EYA4O95677 639 aa16.9■□□□□ 0.3
HDAC5-202ENST00000336057 RPSAP08865 295 aaKnown RBP16.9■□□□□ 0.3
HDAC5-202ENST00000336057 SOX5P35711 763 aa16.9■□□□□ 0.3
HDAC5-202ENST00000336057 SURF1Q15526 300 aa16.9■□□□□ 0.3
HDAC5-202ENST00000336057 DARS2Q6PI48 645 aaKnown RBP16.9■□□□□ 0.3
HDAC5-202ENST00000336057 CCNI2Q6ZMN8 369 aaPredicted RBP16.9■□□□□ 0.3
HDAC5-202ENST00000336057 RMDN3Q96TC7 470 aa16.9■□□□□ 0.3
HDAC5-202ENST00000336057 FEM1BQ9UK73 627 aa16.9■□□□□ 0.3
HDAC5-202ENST00000336057 SUGT1Q9Y2Z0 365 aa16.9■□□□□ 0.3
HDAC5-202ENST00000336057 TMEM131LA2VDJ0 1609 aa16.9■□□□□ 0.3
HDAC5-202ENST00000336057 LDHAP00338 332 aaKnown RBP16.9■□□□□ 0.3
HDAC5-202ENST00000336057 GUCY2CP25092 1073 aa16.9■□□□□ 0.3
HDAC5-202ENST00000336057 PDIK1LQ8N165 341 aa16.9■□□□□ 0.3
HDAC5-202ENST00000336057 ZNF564Q8TBZ8 553 aaPredicted RBP16.9■□□□□ 0.3
HDAC5-202ENST00000336057 GBP5Q96PP8 586 aa16.9■□□□□ 0.3
HDAC5-202ENST00000336057 ABCB11O95342 1321 aa16.9■□□□□ 0.3
HDAC5-202ENST00000336057 FAM187AA6NFU0 413 aa16.89■□□□□ 0.29
HDAC5-202ENST00000336057 TRIM49P0CI25 452 aa16.89■□□□□ 0.29
HDAC5-202ENST00000336057 TRIM49CP0CI26 452 aa16.89■□□□□ 0.29
HDAC5-202ENST00000336057 RASA1P20936 1047 aa16.89■□□□□ 0.29
HDAC5-202ENST00000336057 BBS9Q3SYG4 887 aa16.89■□□□□ 0.29
HDAC5-202ENST00000336057 MMS22LQ6ZRQ5 1243 aa16.89■□□□□ 0.29
HDAC5-202ENST00000336057 CPP00450 1065 aa16.89■□□□□ 0.29
HDAC5-202ENST00000336057 PPP2R5CQ13362 524 aa16.89■□□□□ 0.29
HDAC5-202ENST00000336057 KIAA1586Q9HCI6 787 aa16.89■□□□□ 0.29
HDAC5-202ENST00000336057 IPO5O00410 1097 aaKnown RBP16.89■□□□□ 0.29
HDAC5-202ENST00000336057 TJP3O95049 919 aa16.89■□□□□ 0.29
HDAC5-202ENST00000336057 QARSP47897 775 aaKnown RBP16.89■□□□□ 0.29
HDAC5-202ENST00000336057 ERICH1Q86X53 443 aa16.89■□□□□ 0.29
HDAC5-202ENST00000336057 GBP7Q8N8V2 638 aaPredicted RBP16.89■□□□□ 0.29
HDAC5-202ENST00000336057 LXNQ9BS40 222 aa16.89■□□□□ 0.29
HDAC5-202ENST00000336057 ZNF746Q6NUN9 644 aaPredicted RBP16.89■□□□□ 0.29
HDAC5-202ENST00000336057 SESTD1Q86VW0 696 aa16.89■□□□□ 0.29
HDAC5-202ENST00000336057 PYROXD1Q8WU10 500 aa16.89■□□□□ 0.29
HDAC5-202ENST00000336057 NUP85Q9BW27 656 aa16.89■□□□□ 0.29
HDAC5-202ENST00000336057 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.89■□□□□ 0.29
HDAC5-202ENST00000336057 DAGLAQ9Y4D2 1042 aa16.89■□□□□ 0.29
HDAC5-202ENST00000336057 NPHP3-ACAD11A0A0J9YXS1 232 aa16.88■□□□□ 0.29
HDAC5-202ENST00000336057 A0A1W2PQJ5 194 aa16.88■□□□□ 0.29
HDAC5-202ENST00000336057 GCKP35557 465 aa16.88■□□□□ 0.29
HDAC5-202ENST00000336057 KRT76Q01546 638 aa16.88■□□□□ 0.29
HDAC5-202ENST00000336057 SULF1Q8IWU6 871 aa16.88■□□□□ 0.29
HDAC5-202ENST00000336057 AKT3Q9Y243 479 aa16.88■□□□□ 0.29
HDAC5-202ENST00000336057 PFASO15067 1338 aa16.88■□□□□ 0.29
HDAC5-202ENST00000336057 SYNJ2BP-COX16A0A087WUM0 186 aa16.88■□□□□ 0.29
HDAC5-202ENST00000336057 ECE2O60344 883 aa16.88■□□□□ 0.29
HDAC5-202ENST00000336057 NXNQ6DKJ4 435 aa16.88■□□□□ 0.29
HDAC5-202ENST00000336057 NLRP14Q86W24 1093 aa16.88■□□□□ 0.29
HDAC5-202ENST00000336057 SP8Q8IXZ3 490 aa16.88■□□□□ 0.29
HDAC5-202ENST00000336057 HEMGNQ9BXL5 484 aa16.88■□□□□ 0.29
HDAC5-202ENST00000336057 NUF2Q9BZD4 464 aa16.88■□□□□ 0.29
HDAC5-202ENST00000336057 SLC5A4Q9NY91 659 aa16.88■□□□□ 0.29
HDAC5-202ENST00000336057 COX16Q9P0S2 106 aa16.88■□□□□ 0.29
HDAC5-202ENST00000336057 AMACRQ9UHK6 382 aa16.88■□□□□ 0.29
HDAC5-202ENST00000336057 FBXL5Q9UKA1 691 aa16.88■□□□□ 0.29
HDAC5-202ENST00000336057 TOB1P50616 345 aaPredicted RBP16.88■□□□□ 0.29
HDAC5-202ENST00000336057 OSTNP61366 133 aa16.88■□□□□ 0.29
HDAC5-202ENST00000336057 C16orf86Q6ZW13 317 aa16.88■□□□□ 0.29
HDAC5-202ENST00000336057 MORC4Q8TE76 937 aa16.88■□□□□ 0.29
HDAC5-202ENST00000336057 CAV1Q03135 178 aa16.88■□□□□ 0.29
HDAC5-202ENST00000336057 NOA1Q8NC60 698 aaKnown RBP16.88■□□□□ 0.29
HDAC5-202ENST00000336057 RBM41Q96IZ5 413 aaKnown RBP16.88■□□□□ 0.29
HDAC5-202ENST00000336057 ATP6V0A4Q9HBG4 840 aa16.88■□□□□ 0.29
HDAC5-202ENST00000336057 SAYSD1Q9NPB0 183 aa16.88■□□□□ 0.29
HDAC5-202ENST00000336057 ZNF277Q9NRM2 450 aaPredicted RBP16.88■□□□□ 0.29
HDAC5-202ENST00000336057 PLS3P13797 630 aa16.87■□□□□ 0.29
HDAC5-202ENST00000336057 RCN2Q14257 317 aa16.87■□□□□ 0.29
HDAC5-202ENST00000336057 TBC1D1Q86TI0 1168 aaPredicted RBP16.87■□□□□ 0.29
HDAC5-202ENST00000336057 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.87■□□□□ 0.293e-9■■■■■ 80.2
HDAC5-202ENST00000336057 FAM149B1Q96BN6 582 aa16.87■□□□□ 0.29
HDAC5-202ENST00000336057 MS4A14Q96JA4 679 aa16.87■□□□□ 0.29
HDAC5-202ENST00000336057 SLC16A3O15427 465 aaKnown RBP16.87■□□□□ 0.29
HDAC5-202ENST00000336057 E2F4Q16254 413 aa16.87■□□□□ 0.29
HDAC5-202ENST00000336057 KRT39Q6A163 491 aa16.87■□□□□ 0.29
HDAC5-202ENST00000336057 SCARA5Q6ZMJ2 495 aa16.87■□□□□ 0.29
HDAC5-202ENST00000336057 RTKN2Q8IZC4 609 aa16.87■□□□□ 0.29
HDAC5-202ENST00000336057 SCYL1Q96KG9 808 aa16.87■□□□□ 0.29
HDAC5-202ENST00000336057 PITPNM3Q9BZ71 974 aa16.87■□□□□ 0.29
HDAC5-202ENST00000336057 MROH1Q8NDA8 1641 aa16.87■□□□□ 0.29
HDAC5-202ENST00000336057 DENND3A2RUS2 1198 aa16.87■□□□□ 0.29
HDAC5-202ENST00000336057 PRPSAP2O60256 369 aa16.87■□□□□ 0.29
HDAC5-202ENST00000336057 ANXA13P27216 316 aa16.87■□□□□ 0.29
HDAC5-202ENST00000336057 BEND6Q5SZJ8 279 aaPredicted RBP16.87■□□□□ 0.29
HDAC5-202ENST00000336057 OR6B2Q6IFH4 312 aa16.87■□□□□ 0.29
HDAC5-202ENST00000336057 FBXL16Q8N461 479 aa16.87■□□□□ 0.29
HDAC5-202ENST00000336057 WNT8AQ9H1J5 351 aa16.87■□□□□ 0.29
HDAC5-202ENST00000336057 HAUS2Q9NVX0 235 aa16.87■□□□□ 0.29
HDAC5-202ENST00000336057 RGL1Q9NZL6 768 aa16.87■□□□□ 0.29
HDAC5-202ENST00000336057 EMSYQ7Z589 1322 aa16.86■□□□□ 0.29
HDAC5-202ENST00000336057 XPOTO43592 962 aaKnown RBP16.86■□□□□ 0.29
HDAC5-202ENST00000336057 ACTN1P12814 892 aa16.86■□□□□ 0.29
HDAC5-202ENST00000336057 ZSCAN20P17040 1043 aaPredicted RBP16.86■□□□□ 0.29
HDAC5-202ENST00000336057 NMT1P30419 496 aaKnown RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms