RNA–Protein interactions for RNA: ENST00000332966.8

SLIT3-201, Transcript of slit guidance ligand 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SLIT3, Length 4,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-201ENST00000332966 DNAJC9Q8WXX5 260 aa17.05■□□□□ 0.32
SLIT3-201ENST00000332966 TMEM47Q9BQJ4 181 aa17.05■□□□□ 0.32
SLIT3-201ENST00000332966 ERP44Q9BS26 406 aa17.05■□□□□ 0.32
SLIT3-201ENST00000332966 MIS12Q9H081 205 aa17.05■□□□□ 0.32
SLIT3-201ENST00000332966 TSPYL2Q9H2G4 693 aaPredicted RBP17.05■□□□□ 0.32
SLIT3-201ENST00000332966 RNF8O76064 485 aa17.04■□□□□ 0.32
SLIT3-201ENST00000332966 PLEKP08567 350 aaPredicted RBP17.04■□□□□ 0.32
SLIT3-201ENST00000332966 HPS3Q969F9 1004 aa17.04■□□□□ 0.32
SLIT3-201ENST00000332966 NDE1Q9NXR1 346 aa17.04■□□□□ 0.32
SLIT3-201ENST00000332966 E9PMD0 336 aa17.04■□□□□ 0.32
SLIT3-201ENST00000332966 PHF2O75151 1096 aa17.04■□□□□ 0.32
SLIT3-201ENST00000332966 NQO1P15559 274 aaKnown RBP17.04■□□□□ 0.32
SLIT3-201ENST00000332966 GEN1Q17RS7 908 aa17.04■□□□□ 0.32
SLIT3-201ENST00000332966 TRIM59Q8IWR1 403 aa17.04■□□□□ 0.32
SLIT3-201ENST00000332966 MDM1Q8TC05 714 aa17.04■□□□□ 0.32
SLIT3-201ENST00000332966 TEKT1Q969V4 418 aa17.04■□□□□ 0.32
SLIT3-201ENST00000332966 DCTN4Q9UJW0 460 aa17.04■□□□□ 0.32
SLIT3-201ENST00000332966 MAD1L1Q9Y6D9 718 aa17.04■□□□□ 0.32
SLIT3-201ENST00000332966 CDH16O75309 829 aa17.04■□□□□ 0.32
SLIT3-201ENST00000332966 SOX5P35711 763 aa17.04■□□□□ 0.32
SLIT3-201ENST00000332966 PDIA5Q14554 519 aa17.04■□□□□ 0.32
SLIT3-201ENST00000332966 TBC1D9BQ66K14 1250 aa17.04■□□□□ 0.32
SLIT3-201ENST00000332966 KIF2BQ8N4N8 673 aa17.04■□□□□ 0.32
SLIT3-201ENST00000332966 MYCLP12524 364 aaPredicted RBP17.04■□□□□ 0.32
SLIT3-201ENST00000332966 DEUP1Q05D60 604 aa17.04■□□□□ 0.32
SLIT3-201ENST00000332966 BBS9Q3SYG4 887 aa17.04■□□□□ 0.32
SLIT3-201ENST00000332966 XKR9Q5GH70 373 aa17.04■□□□□ 0.32
SLIT3-201ENST00000332966 LRRC34Q8IZ02 419 aa17.04■□□□□ 0.32
SLIT3-201ENST00000332966 CCDC17Q96LX7 622 aa17.04■□□□□ 0.32
SLIT3-201ENST00000332966 WDR11Q9BZH6 1224 aa17.04■□□□□ 0.32
SLIT3-201ENST00000332966 PCIF1Q9H4Z3 704 aa17.04■□□□□ 0.32
SLIT3-201ENST00000332966 FTLP02792 175 aaPredicted RBP17.03■□□□□ 0.32
SLIT3-201ENST00000332966 RFX1P22670 979 aa17.03■□□□□ 0.32
SLIT3-201ENST00000332966 KRT81Q14533 505 aa17.03■□□□□ 0.32
SLIT3-201ENST00000332966 TMEM154Q6P9G4 183 aa17.03■□□□□ 0.32
SLIT3-201ENST00000332966 COL23A1Q86Y22 540 aaPredicted RBP17.03■□□□□ 0.32
SLIT3-201ENST00000332966 CHURC1Q8WUH1 139 aa17.03■□□□□ 0.32
SLIT3-201ENST00000332966 DCP1AQ9NPI6 582 aaPredicted RBP17.03■□□□□ 0.32
SLIT3-201ENST00000332966 SUCLA2Q9P2R7 463 aaPredicted RBP17.03■□□□□ 0.32
SLIT3-201ENST00000332966 EPS15L1Q9UBC2 864 aa17.03■□□□□ 0.32
SLIT3-201ENST00000332966 TRPC6Q9Y210 931 aa17.03■□□□□ 0.32
SLIT3-201ENST00000332966 TOM1O60784 492 aa17.03■□□□□ 0.32
SLIT3-201ENST00000332966 PDHBP11177 359 aa17.03■□□□□ 0.32
SLIT3-201ENST00000332966 LIG4P49917 911 aa17.03■□□□□ 0.32
SLIT3-201ENST00000332966 DMP1Q13316 513 aaPredicted RBP17.03■□□□□ 0.32
SLIT3-201ENST00000332966 C1orf146Q5VVC0 180 aa17.03■□□□□ 0.32
SLIT3-201ENST00000332966 POMGNT1Q8WZA1 660 aa17.03■□□□□ 0.32
SLIT3-201ENST00000332966 CNOT8Q9UFF9 292 aaKnown RBP17.03■□□□□ 0.32
SLIT3-201ENST00000332966 DDX20Q9UHI6 824 aaKnown RBP17.03■□□□□ 0.32
SLIT3-201ENST00000332966 ANAPC7Q9UJX3 599 aa17.03■□□□□ 0.32
SLIT3-201ENST00000332966 FAM237AA0A1B0GTK4 181 aa17.03■□□□□ 0.32
SLIT3-201ENST00000332966 NVLO15381 856 aaKnown RBP17.03■□□□□ 0.32
SLIT3-201ENST00000332966 CYP2D6P10635 497 aa17.03■□□□□ 0.32
SLIT3-201ENST00000332966 ALCAMQ13740 583 aa17.03■□□□□ 0.32
SLIT3-201ENST00000332966 NXNQ6DKJ4 435 aa17.03■□□□□ 0.32
SLIT3-201ENST00000332966 JAMLQ86YT9 394 aa17.03■□□□□ 0.32
SLIT3-201ENST00000332966 CRLF3Q8IUI8 442 aa17.03■□□□□ 0.32
SLIT3-201ENST00000332966 GABPB2Q8TAK5 448 aaPredicted RBP17.03■□□□□ 0.32
SLIT3-201ENST00000332966 DBR1Q9UK59 544 aaKnown RBP17.03■□□□□ 0.32
SLIT3-201ENST00000332966 H7C0C1 242 aa17.03■□□□□ 0.32
SLIT3-201ENST00000332966 ATP5OP48047 213 aa17.03■□□□□ 0.32
SLIT3-201ENST00000332966 GALCP54803 685 aa17.03■□□□□ 0.32
SLIT3-201ENST00000332966 ZNF564Q8TBZ8 553 aaPredicted RBP17.03■□□□□ 0.32
SLIT3-201ENST00000332966 MRPL11Q9Y3B7 192 aaKnown RBP17.03■□□□□ 0.32
SLIT3-201ENST00000332966 ABCB11O95342 1321 aa17.03■□□□□ 0.32
SLIT3-201ENST00000332966 TFRCP02786 760 aaKnown RBP17.02■□□□□ 0.32
SLIT3-201ENST00000332966 ASPHQ12797 758 aa17.02■□□□□ 0.32
SLIT3-201ENST00000332966 LONP2Q86WA8 852 aa17.02■□□□□ 0.32
SLIT3-201ENST00000332966 TTC17Q96AE7 1141 aa17.02■□□□□ 0.32
SLIT3-201ENST00000332966 PABPC3Q9H361 631 aaKnown RBP17.02■□□□□ 0.32
SLIT3-201ENST00000332966 TMEM120BA0PK00 339 aa17.02■□□□□ 0.32
SLIT3-201ENST00000332966 CFAP69A5D8W1 941 aa17.02■□□□□ 0.32
SLIT3-201ENST00000332966 MDM2Q00987 491 aaPredicted RBP17.02■□□□□ 0.32
SLIT3-201ENST00000332966 PDE1BQ01064 536 aa17.02■□□□□ 0.32
SLIT3-201ENST00000332966 CDAN1Q8IWY9 1227 aa17.02■□□□□ 0.32
SLIT3-201ENST00000332966 FAM161BQ96MY7 647 aa17.02■□□□□ 0.32
SLIT3-201ENST00000332966 SERPINI1Q99574 410 aa17.02■□□□□ 0.32
SLIT3-201ENST00000332966 PLA2G12BQ9BX93 195 aa17.02■□□□□ 0.32
SLIT3-201ENST00000332966 TRPA1O75762 1119 aa17.02■□□□□ 0.31
SLIT3-201ENST00000332966 ATP6V1G2O95670 118 aa17.02■□□□□ 0.31
SLIT3-201ENST00000332966 GLI1P08151 1106 aa17.02■□□□□ 0.31
SLIT3-201ENST00000332966 UCHL3P15374 230 aa17.02■□□□□ 0.31
SLIT3-201ENST00000332966 GARSP41250 739 aaKnown RBP17.02■□□□□ 0.31
SLIT3-201ENST00000332966 ARL4CP56559 192 aa17.02■□□□□ 0.31
SLIT3-201ENST00000332966 RCSD1Q6JBY9 416 aa17.02■□□□□ 0.31
SLIT3-201ENST00000332966 NSMFQ6X4W1 530 aa17.02■□□□□ 0.31
SLIT3-201ENST00000332966 PRPF38AQ8NAV1 312 aaKnown RBP17.02■□□□□ 0.31
SLIT3-201ENST00000332966 TRAIPQ9BWF2 469 aa17.02■□□□□ 0.31
SLIT3-201ENST00000332966 SMG5Q9UPR3 1016 aaKnown RBP17.02■□□□□ 0.31
SLIT3-201ENST00000332966 PCDHB4Q9Y5E5 795 aa17.02■□□□□ 0.31
SLIT3-201ENST00000332966 DEPDC5O75140 1603 aa17.02■□□□□ 0.31
SLIT3-201ENST00000332966 TJP3O95049 919 aa17.02■□□□□ 0.31
SLIT3-201ENST00000332966 KLHL38Q2WGJ6 581 aa17.02■□□□□ 0.31
SLIT3-201ENST00000332966 BSPRYQ5W0U4 402 aa17.02■□□□□ 0.31
SLIT3-201ENST00000332966 PROCA1Q8NCQ7 364 aaPredicted RBP17.02■□□□□ 0.31
SLIT3-201ENST00000332966 DDX17Q92841 729 aaKnown RBP17.02■□□□□ 0.31
SLIT3-201ENST00000332966 ERP27Q96DN0 273 aa17.02■□□□□ 0.31
SLIT3-201ENST00000332966 ANO3Q9BYT9 981 aa17.02■□□□□ 0.31
SLIT3-201ENST00000332966 THRAP3Q9Y2W1 955 aaKnown RBP17.02■□□□□ 0.31
SLIT3-201ENST00000332966 TACC3Q9Y6A5 838 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms