RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 TUFT1Q9NNX1 390 aa18.95■□□□□ 0.62
COL9A1-201ENST00000320755 ARHGEF35A5YM69 484 aa18.95■□□□□ 0.62
COL9A1-201ENST00000320755 PGRMC1O00264 195 aaKnown RBP18.95■□□□□ 0.62
COL9A1-201ENST00000320755 PIK3CDO00329 1044 aa18.95■□□□□ 0.62
COL9A1-201ENST00000320755 FERP16591 822 aa18.95■□□□□ 0.62
COL9A1-201ENST00000320755 IQCKQ8N0W5 287 aa18.95■□□□□ 0.62
COL9A1-201ENST00000320755 BORCS6Q96GS4 357 aa18.95■□□□□ 0.62
COL9A1-201ENST00000320755 NACC1Q96RE7 527 aa18.95■□□□□ 0.62
COL9A1-201ENST00000320755 GOPCQ9HD26 462 aa18.95■□□□□ 0.62
COL9A1-201ENST00000320755 AGPAT3Q9NRZ7 376 aa18.95■□□□□ 0.62
COL9A1-201ENST00000320755 QSER1Q2KHR3 1735 aa18.95■□□□□ 0.62
COL9A1-201ENST00000320755 IPO5O00410 1097 aaKnown RBP18.94■□□□□ 0.62
COL9A1-201ENST00000320755 TNFRSF8P28908 595 aa18.94■□□□□ 0.62
COL9A1-201ENST00000320755 SOX5P35711 763 aa18.94■□□□□ 0.62
COL9A1-201ENST00000320755 CEP85LQ5SZL2 805 aa18.94■□□□□ 0.62
COL9A1-201ENST00000320755 PBKQ96KB5 322 aa18.94■□□□□ 0.62
COL9A1-201ENST00000320755 CELF4Q9BZC1 486 aaKnown RBP18.94■□□□□ 0.62
COL9A1-201ENST00000320755 CHORDC1Q9UHD1 332 aaPredicted RBP18.94■□□□□ 0.62
COL9A1-201ENST00000320755 F8VZ95 297 aa18.94■□□□□ 0.62
COL9A1-201ENST00000320755 COPB2P35606 906 aa18.94■□□□□ 0.62
COL9A1-201ENST00000320755 USP8P40818 1118 aa18.94■□□□□ 0.62
COL9A1-201ENST00000320755 PALB2Q86YC2 1186 aa18.94■□□□□ 0.62
COL9A1-201ENST00000320755 SLC35G2Q8TBE7 412 aa18.94■□□□□ 0.62
COL9A1-201ENST00000320755 SLC5A5Q92911 643 aa18.94■□□□□ 0.62
COL9A1-201ENST00000320755 HOMER2Q9NSB8 354 aa18.94■□□□□ 0.62
COL9A1-201ENST00000320755 TAS2R14Q9NYV8 317 aa18.94■□□□□ 0.62
COL9A1-201ENST00000320755 PLAAQ9Y263 795 aa18.94■□□□□ 0.62
COL9A1-201ENST00000320755 BUB1BO60566 1050 aaPredicted RBP18.94■□□□□ 0.62
COL9A1-201ENST00000320755 HIP1RO75146 1068 aa18.94■□□□□ 0.62
COL9A1-201ENST00000320755 HPDP32754 393 aaPredicted RBP18.94■□□□□ 0.62
COL9A1-201ENST00000320755 CPXCR1Q8N123 301 aa18.94■□□□□ 0.62
COL9A1-201ENST00000320755 LMBR1Q8WVP7 490 aa18.94■□□□□ 0.62
COL9A1-201ENST00000320755 PIK3R5Q8WYR1 880 aa18.94■□□□□ 0.62
COL9A1-201ENST00000320755 AGBL1Q96MI9 1066 aa18.94■□□□□ 0.62
COL9A1-201ENST00000320755 TMEM39BQ9GZU3 492 aa18.94■□□□□ 0.62
COL9A1-201ENST00000320755 DPH5Q9H2P9 285 aa18.94■□□□□ 0.62
COL9A1-201ENST00000320755 TAF1DQ9H5J8 278 aaPredicted RBP18.94■□□□□ 0.62
COL9A1-201ENST00000320755 TMX2Q9Y320 296 aa18.94■□□□□ 0.62
COL9A1-201ENST00000320755 GUCY1A3Q02108 690 aa18.93■□□□□ 0.62
COL9A1-201ENST00000320755 LDHDQ86WU2 507 aa18.93■□□□□ 0.62
COL9A1-201ENST00000320755 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.93■□□□□ 0.62
COL9A1-201ENST00000320755 INTS2Q9H0H0 1204 aaKnown RBP18.93■□□□□ 0.62
COL9A1-201ENST00000320755 EIF3DO15371 548 aaKnown RBP eCLIP18.93■□□□□ 0.62
COL9A1-201ENST00000320755 PPP2R5CQ13362 524 aa18.93■□□□□ 0.62
COL9A1-201ENST00000320755 CHURC1Q8WUH1 139 aa18.93■□□□□ 0.62
COL9A1-201ENST00000320755 BCCIPQ9P287 314 aaKnown RBP eCLIP18.93■□□□□ 0.62
COL9A1-201ENST00000320755 PPP1R9AQ9ULJ8 1098 aa18.93■□□□□ 0.62
COL9A1-201ENST00000320755 IGSF9BQ9UPX0 1349 aa18.93■□□□□ 0.62
COL9A1-201ENST00000320755 UTRNP46939 3433 aa18.93■□□□□ 0.62
COL9A1-201ENST00000320755 NRXN2Q9P2S2 1712 aa18.92■□□□□ 0.62
COL9A1-201ENST00000320755 TMEM150BA6NC51 233 aa18.92■□□□□ 0.62
COL9A1-201ENST00000320755 K7ENM7 598 aa18.92■□□□□ 0.62
COL9A1-201ENST00000320755 DAPK3O43293 454 aa18.92■□□□□ 0.62
COL9A1-201ENST00000320755 SHOX2O60902 331 aaPredicted RBP18.92■□□□□ 0.62
COL9A1-201ENST00000320755 TNFAIP3P21580 790 aa18.92■□□□□ 0.62
COL9A1-201ENST00000320755 DLG4P78352 724 aa18.92■□□□□ 0.62
COL9A1-201ENST00000320755 ZNF211Q13398 564 aaPredicted RBP18.92■□□□□ 0.62
COL9A1-201ENST00000320755 DLGAP5Q15398 846 aa18.92■□□□□ 0.62
COL9A1-201ENST00000320755 SCFD2Q8WU76 684 aa18.92■□□□□ 0.62
COL9A1-201ENST00000320755 CTNNBL1Q8WYA6 563 aaPredicted RBP18.92■□□□□ 0.62
COL9A1-201ENST00000320755 FIZ1Q96SL8 496 aa18.92■□□□□ 0.62
COL9A1-201ENST00000320755 STK33Q9BYT3 514 aa18.92■□□□□ 0.62
COL9A1-201ENST00000320755 TMEM59LQ9UK28 342 aa18.92■□□□□ 0.62
COL9A1-201ENST00000320755 AMFRQ9UKV5 643 aa18.92■□□□□ 0.62
COL9A1-201ENST00000320755 MRPL11Q9Y3B7 192 aaKnown RBP18.92■□□□□ 0.62
COL9A1-201ENST00000320755 BTNL10A8MVZ5 291 aa18.92■□□□□ 0.62
COL9A1-201ENST00000320755 TTI1O43156 1089 aa18.92■□□□□ 0.62
COL9A1-201ENST00000320755 FGGP02679 453 aa18.92■□□□□ 0.62
COL9A1-201ENST00000320755 MYL7Q01449 175 aa18.92■□□□□ 0.62
COL9A1-201ENST00000320755 NT5DC3Q86UY8 548 aa18.92■□□□□ 0.62
COL9A1-201ENST00000320755 NEUROG2Q9H2A3 272 aa18.92■□□□□ 0.62
COL9A1-201ENST00000320755 NR2E1Q9Y466 385 aa18.92■□□□□ 0.62
COL9A1-201ENST00000320755 SLX4Q8IY92 1834 aa18.92■□□□□ 0.62
COL9A1-201ENST00000320755 FOXN3O00409 490 aaPredicted RBP18.92■□□□□ 0.62
COL9A1-201ENST00000320755 EIF3HO15372 352 aaKnown RBP eCLIP18.92■□□□□ 0.62
COL9A1-201ENST00000320755 NPM3O75607 178 aaKnown RBP18.92■□□□□ 0.62
COL9A1-201ENST00000320755 WHAMMQ8TF30 809 aa18.92■□□□□ 0.62
COL9A1-201ENST00000320755 ARHGEF26Q96DR7 871 aa18.92■□□□□ 0.62
COL9A1-201ENST00000320755 RNPC3Q96LT9 517 aaKnown RBP18.92■□□□□ 0.62
COL9A1-201ENST00000320755 TEKT3Q9BXF9 490 aa18.92■□□□□ 0.62
COL9A1-201ENST00000320755 HERC5Q9UII4 1024 aaKnown RBP18.92■□□□□ 0.62
COL9A1-201ENST00000320755 TMEM110-MUSTN1A8MSY1 372 aa18.91■□□□□ 0.62
COL9A1-201ENST00000320755 FLT3P36888 993 aa18.91■□□□□ 0.62
COL9A1-201ENST00000320755 FKBP1AP62942 108 aaKnown RBP18.91■□□□□ 0.62
COL9A1-201ENST00000320755 GRIPAP1Q4V328 841 aa18.91■□□□□ 0.62
COL9A1-201ENST00000320755 PHLDB3Q6NSJ2 640 aa18.91■□□□□ 0.62
COL9A1-201ENST00000320755 ZSWIM2Q8NEG5 633 aa18.91■□□□□ 0.62
COL9A1-201ENST00000320755 ACTRT1Q8TDG2 376 aa18.91■□□□□ 0.62
COL9A1-201ENST00000320755 UBLCP1Q8WVY7 318 aaPredicted RBP18.91■□□□□ 0.62
COL9A1-201ENST00000320755 WDR11Q9BZH6 1224 aa18.91■□□□□ 0.62
COL9A1-201ENST00000320755 FAM107BQ9H098 131 aa18.91■□□□□ 0.62
COL9A1-201ENST00000320755 UBE2TQ9NPD8 197 aaPredicted RBP18.91■□□□□ 0.62
COL9A1-201ENST00000320755 TMEM51Q9NW97 253 aa18.91■□□□□ 0.62
COL9A1-201ENST00000320755 ZNF70Q9UC06 446 aaPredicted RBP18.91■□□□□ 0.62
COL9A1-201ENST00000320755 ATRNL1Q5VV63 1379 aa18.91■□□□□ 0.62
COL9A1-201ENST00000320755 SPDYE2BA6NHP3 402 aa18.91■□□□□ 0.62
COL9A1-201ENST00000320755 SPDYE6P0CI01 402 aa18.91■□□□□ 0.62
COL9A1-201ENST00000320755 ZNF746Q6NUN9 644 aaPredicted RBP18.91■□□□□ 0.62
COL9A1-201ENST00000320755 PADI6Q6TGC4 694 aa18.91■□□□□ 0.62
COL9A1-201ENST00000320755 STXBP4Q6ZWJ1 553 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms