RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 PBKQ96KB5 322 aa16.46■□□□□ 0.23
CSDC2-201ENST00000306149 PARVGQ9HBI0 331 aa16.46■□□□□ 0.23
CSDC2-201ENST00000306149 ATP8B3O60423 1300 aa16.46■□□□□ 0.23
CSDC2-201ENST00000306149 PGRMC1O00264 195 aaKnown RBP16.46■□□□□ 0.23
CSDC2-201ENST00000306149 PSMD10O75832 226 aa16.46■□□□□ 0.23
CSDC2-201ENST00000306149 ARP10275 920 aa16.46■□□□□ 0.23
CSDC2-201ENST00000306149 CHRNA5P30532 468 aa16.46■□□□□ 0.23
CSDC2-201ENST00000306149 STAT1P42224 750 aa16.46■□□□□ 0.23
CSDC2-201ENST00000306149 FMO5P49326 533 aa16.46■□□□□ 0.23
CSDC2-201ENST00000306149 PALB2Q86YC2 1186 aa16.46■□□□□ 0.23
CSDC2-201ENST00000306149 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.46■□□□□ 0.23
CSDC2-201ENST00000306149 NENFQ9UMX5 172 aa16.46■□□□□ 0.23
CSDC2-201ENST00000306149 NR2E1Q9Y466 385 aa16.46■□□□□ 0.23
CSDC2-201ENST00000306149 IGSF9BQ9UPX0 1349 aa16.46■□□□□ 0.22
CSDC2-201ENST00000306149 GAS7O60861 476 aa16.45■□□□□ 0.22
CSDC2-201ENST00000306149 CYP3A4P08684 503 aa16.45■□□□□ 0.22
CSDC2-201ENST00000306149 COPB2P35606 906 aa16.45■□□□□ 0.22
CSDC2-201ENST00000306149 IFI16Q16666 785 aaKnown RBP16.45■□□□□ 0.22
CSDC2-201ENST00000306149 ODR4Q5SWX8 454 aa16.45■□□□□ 0.22
CSDC2-201ENST00000306149 FAM178BQ8IXR5 827 aa16.45■□□□□ 0.22
CSDC2-201ENST00000306149 OLIG1Q8TAK6 271 aa16.45■□□□□ 0.22
CSDC2-201ENST00000306149 ACTRT1Q8TDG2 376 aa16.45■□□□□ 0.22
CSDC2-201ENST00000306149 FIZ1Q96SL8 496 aa16.45■□□□□ 0.22
CSDC2-201ENST00000306149 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.45■□□□□ 0.22
CSDC2-201ENST00000306149 ISCUQ9H1K1 167 aa16.45■□□□□ 0.22
CSDC2-201ENST00000306149 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.45■□□□□ 0.22
CSDC2-201ENST00000306149 TAS2R14Q9NYV8 317 aa16.45■□□□□ 0.22
CSDC2-201ENST00000306149 TISP43B9A030 160 aa16.45■□□□□ 0.22
CSDC2-201ENST00000306149 F8VZ95 297 aa16.45■□□□□ 0.22
CSDC2-201ENST00000306149 DAPK3O43293 454 aa16.45■□□□□ 0.22
CSDC2-201ENST00000306149 BUB1BO60566 1050 aaPredicted RBP16.45■□□□□ 0.22
CSDC2-201ENST00000306149 HPDP32754 393 aaPredicted RBP16.45■□□□□ 0.22
CSDC2-201ENST00000306149 MCTP2Q6DN12 878 aa16.45■□□□□ 0.22
CSDC2-201ENST00000306149 BTNL9Q6UXG8 535 aa16.45■□□□□ 0.22
CSDC2-201ENST00000306149 KRT27Q7Z3Y8 459 aa16.45■□□□□ 0.22
CSDC2-201ENST00000306149 NT5DC3Q86UY8 548 aa16.45■□□□□ 0.22
CSDC2-201ENST00000306149 SLC35G2Q8TBE7 412 aa16.45■□□□□ 0.22
CSDC2-201ENST00000306149 SH2D3AQ9BRG2 576 aa16.45■□□□□ 0.22
CSDC2-201ENST00000306149 TRIM31Q9BZY9 425 aa16.45■□□□□ 0.22
CSDC2-201ENST00000306149 PPP1R9AQ9ULJ8 1098 aa16.45■□□□□ 0.22
CSDC2-201ENST00000306149 GAP43P17677 238 aa16.44■□□□□ 0.22
CSDC2-201ENST00000306149 SOX5P35711 763 aa16.44■□□□□ 0.22
CSDC2-201ENST00000306149 HSPA9P38646 679 aaKnown RBP16.44■□□□□ 0.22
CSDC2-201ENST00000306149 PRPF4BQ13523 1007 aaKnown RBP16.44■□□□□ 0.22
CSDC2-201ENST00000306149 ZNF720Q7Z2F6 126 aa16.44■□□□□ 0.22
CSDC2-201ENST00000306149 SERPINA10Q9UK55 444 aa16.44■□□□□ 0.22
CSDC2-201ENST00000306149 TTI1O43156 1089 aa16.44■□□□□ 0.22
CSDC2-201ENST00000306149 FERP16591 822 aa16.44■□□□□ 0.22
CSDC2-201ENST00000306149 HSD17B3P37058 310 aa16.44■□□□□ 0.22
CSDC2-201ENST00000306149 UAP1Q16222 522 aaPredicted RBP16.44■□□□□ 0.22
CSDC2-201ENST00000306149 PAXIP1Q6ZW49 1069 aaPredicted RBP16.44■□□□□ 0.22
CSDC2-201ENST00000306149 CDAN1Q8IWY9 1227 aa16.44■□□□□ 0.22
CSDC2-201ENST00000306149 HOOK2Q96ED9 719 aa16.44■□□□□ 0.22
CSDC2-201ENST00000306149 MRIQ9BWK5 157 aa16.44■□□□□ 0.22
CSDC2-201ENST00000306149 DPH5Q9H2P9 285 aa16.44■□□□□ 0.22
CSDC2-201ENST00000306149 UNC45AQ9H3U1 944 aa16.44■□□□□ 0.22
CSDC2-201ENST00000306149 PCIF1Q9H4Z3 704 aa16.44■□□□□ 0.22
CSDC2-201ENST00000306149 AGPAT3Q9NRZ7 376 aa16.44■□□□□ 0.22
CSDC2-201ENST00000306149 FBXO28Q9NVF7 368 aa16.44■□□□□ 0.22
CSDC2-201ENST00000306149 STXBP5LQ9Y2K9 1186 aa16.44■□□□□ 0.22
CSDC2-201ENST00000306149 GCOM1H8Y6P7 765 aaPredicted RBP16.43■□□□□ 0.22
CSDC2-201ENST00000306149 PIK3CDO00329 1044 aa16.43■□□□□ 0.22
CSDC2-201ENST00000306149 PPP1R12BO60237 982 aaPredicted RBP16.43■□□□□ 0.22
CSDC2-201ENST00000306149 POLR2MP0CAP2 368 aa16.43■□□□□ 0.22
CSDC2-201ENST00000306149 TBC1D10BQ4KMP7 808 aaPredicted RBP16.43■□□□□ 0.22
CSDC2-201ENST00000306149 SPATS2Q86XZ4 545 aaKnown RBP16.43■□□□□ 0.22
CSDC2-201ENST00000306149 SLC30A5Q8TAD4 765 aa16.43■□□□□ 0.22
CSDC2-201ENST00000306149 ARHGEF26Q96DR7 871 aa16.43■□□□□ 0.22
CSDC2-201ENST00000306149 GPR88Q9GZN0 384 aa16.43■□□□□ 0.22
CSDC2-201ENST00000306149 CHORDC1Q9UHD1 332 aaPredicted RBP16.43■□□□□ 0.22
CSDC2-201ENST00000306149 FBXL5Q9UKA1 691 aa16.43■□□□□ 0.22
CSDC2-201ENST00000306149 UTRNP46939 3433 aa16.43■□□□□ 0.22
CSDC2-201ENST00000306149 NDUFAB1O14561 156 aa16.43■□□□□ 0.22
CSDC2-201ENST00000306149 FGGP02679 453 aa16.43■□□□□ 0.22
CSDC2-201ENST00000306149 NR1D1P20393 614 aa16.43■□□□□ 0.22
CSDC2-201ENST00000306149 ANXA13P27216 316 aa16.43■□□□□ 0.22
CSDC2-201ENST00000306149 PRELPP51888 382 aa16.43■□□□□ 0.22
CSDC2-201ENST00000306149 B4GALNT4Q76KP1 1039 aa16.43■□□□□ 0.22
CSDC2-201ENST00000306149 HS2ST1Q7LGA3 356 aa16.43■□□□□ 0.22
CSDC2-201ENST00000306149 SLFN11Q7Z7L1 901 aa16.43■□□□□ 0.22
CSDC2-201ENST00000306149 ATP6V1G3Q96LB4 118 aa16.43■□□□□ 0.22
CSDC2-201ENST00000306149 ZNF577Q9BSK1 485 aa16.43■□□□□ 0.22
CSDC2-201ENST00000306149 PAGR1Q9BTK6 254 aa16.43■□□□□ 0.22
CSDC2-201ENST00000306149 TUFT1Q9NNX1 390 aa16.43■□□□□ 0.22
CSDC2-201ENST00000306149 COL11A2P13942 1736 aaPredicted RBP16.43■□□□□ 0.22
CSDC2-201ENST00000306149 HMGB1P1B2RPK0 211 aaPredicted RBP16.43■□□□□ 0.22
CSDC2-201ENST00000306149 ERLIN2O94905 339 aa16.43■□□□□ 0.22
CSDC2-201ENST00000306149 SEC24CP53992 1094 aa16.43■□□□□ 0.22
CSDC2-201ENST00000306149 DLG4P78352 724 aa16.43■□□□□ 0.22
CSDC2-201ENST00000306149 HDLBPQ00341 1268 aaKnown RBP16.43■□□□□ 0.22
CSDC2-201ENST00000306149 ZNF211Q13398 564 aaPredicted RBP16.43■□□□□ 0.22
CSDC2-201ENST00000306149 SYCP3Q8IZU3 236 aa16.43■□□□□ 0.22
CSDC2-201ENST00000306149 MICALL1Q8N3F8 863 aa16.43■□□□□ 0.22
CSDC2-201ENST00000306149 SLC5A5Q92911 643 aa16.43■□□□□ 0.22
CSDC2-201ENST00000306149 STK33Q9BYT3 514 aa16.43■□□□□ 0.22
CSDC2-201ENST00000306149 INTS2Q9H0H0 1204 aaKnown RBP16.43■□□□□ 0.22
CSDC2-201ENST00000306149 BCCIPQ9P287 314 aaKnown RBP eCLIP16.43■□□□□ 0.22
CSDC2-201ENST00000306149 FRMD4BQ9Y2L6 1034 aa16.43■□□□□ 0.22
CSDC2-201ENST00000306149 GTPBP10A4D1E9 387 aaKnown RBP16.42■□□□□ 0.22
CSDC2-201ENST00000306149 BHMG1C9JSJ3 638 aaPredicted RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms