RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 TNNT3P45378 269 aaPredicted RBP5.94□□□□□ -1.46
VPS50-202ENST00000305866 ADCY7P51828 1080 aa5.94□□□□□ -1.46
VPS50-202ENST00000305866 CNGA2Q16280 664 aa5.94□□□□□ -1.46
VPS50-202ENST00000305866 TRAPPC3LQ5T215 181 aa5.94□□□□□ -1.46
VPS50-202ENST00000305866 FOXB2Q5VYV0 432 aa5.94□□□□□ -1.46
VPS50-202ENST00000305866 SV2BQ7L1I2 683 aa5.94□□□□□ -1.46
VPS50-202ENST00000305866 CPNE8Q86YQ8 564 aa5.94□□□□□ -1.46
VPS50-202ENST00000305866 CERS5Q8N5B7 392 aa5.94□□□□□ -1.46
VPS50-202ENST00000305866 ANKS4BQ8N8V4 417 aa5.94□□□□□ -1.46
VPS50-202ENST00000305866 SYT2Q8N9I0 419 aaPredicted RBP5.94□□□□□ -1.46
VPS50-202ENST00000305866 ART4Q93070 314 aa5.94□□□□□ -1.46
VPS50-202ENST00000305866 CCDC42Q96M95 316 aa5.94□□□□□ -1.46
VPS50-202ENST00000305866 XPO6Q96QU8 1125 aaKnown RBP5.94□□□□□ -1.46
VPS50-202ENST00000305866 DHX36Q9H2U1 1008 aaKnown RBP5.94□□□□□ -1.46
VPS50-202ENST00000305866 TLE6Q9H808 572 aa5.94□□□□□ -1.46
VPS50-202ENST00000305866 KANSL2Q9H9L4 492 aa5.94□□□□□ -1.46
VPS50-202ENST00000305866 NLRC4Q9NPP4 1024 aa5.94□□□□□ -1.46
VPS50-202ENST00000305866 TAS2R14Q9NYV8 317 aa5.94□□□□□ -1.46
VPS50-202ENST00000305866 TFCP2L1Q9NZI6 479 aa5.94□□□□□ -1.46
VPS50-202ENST00000305866 KANSL3Q9P2N6 904 aa5.94□□□□□ -1.46
VPS50-202ENST00000305866 ANKFY1Q9P2R3 1169 aa5.94□□□□□ -1.46
VPS50-202ENST00000305866 GGA1Q9UJY5 639 aa5.94□□□□□ -1.46
VPS50-202ENST00000305866 ZNF236Q9UL36 1845 aa5.94□□□□□ -1.46
VPS50-202ENST00000305866 TSC2P49815 1807 aa5.93□□□□□ -1.46
VPS50-202ENST00000305866 TCRBV7S2A1N4TA0A589 114 aa5.93□□□□□ -1.46
VPS50-202ENST00000305866 EME2A4GXA9 379 aaPredicted RBP5.93□□□□□ -1.46
VPS50-202ENST00000305866 USP17L5A8MUK1 530 aa5.93□□□□□ -1.46
VPS50-202ENST00000305866 TTI1O43156 1089 aa5.93□□□□□ -1.46
VPS50-202ENST00000305866 AKAP3O75969 853 aa5.93□□□□□ -1.46
VPS50-202ENST00000305866 UCHL3P15374 230 aa5.93□□□□□ -1.46
VPS50-202ENST00000305866 CREB1P16220 341 aa5.93□□□□□ -1.46
VPS50-202ENST00000305866 UBA7P41226 1012 aa5.93□□□□□ -1.46
VPS50-202ENST00000305866 IFI35P80217 286 aaPredicted RBP5.93□□□□□ -1.46
VPS50-202ENST00000305866 LRRC41Q15345 812 aa5.93□□□□□ -1.46
VPS50-202ENST00000305866 HSP90B2PQ58FF3 399 aa5.93□□□□□ -1.46
VPS50-202ENST00000305866 IQCEQ6IPM2 695 aa5.93□□□□□ -1.46
VPS50-202ENST00000305866 AADACL2Q6P093 401 aa5.93□□□□□ -1.46
VPS50-202ENST00000305866 SLFN12Q8IYM2 578 aa5.93□□□□□ -1.46
VPS50-202ENST00000305866 ZNF444Q8N0Y2 327 aaPredicted RBP5.93□□□□□ -1.46
VPS50-202ENST00000305866 PRELID2Q8N945 189 aa5.93□□□□□ -1.46
VPS50-202ENST00000305866 TBC1D5Q92609 795 aa5.93□□□□□ -1.46
VPS50-202ENST00000305866 FAM20AQ96MK3 541 aa5.93□□□□□ -1.46
VPS50-202ENST00000305866 NOX5Q96PH1 765 aa5.93□□□□□ -1.46
VPS50-202ENST00000305866 ST6GALNAC4Q9H4F1 302 aa5.93□□□□□ -1.46
VPS50-202ENST00000305866 SLITRK6Q9H5Y7 841 aa5.93□□□□□ -1.46
VPS50-202ENST00000305866 CNOT7Q9UIV1 285 aaKnown RBP5.93□□□□□ -1.46
VPS50-202ENST00000305866 CCNL1Q9UK58 526 aaPredicted RBP5.93□□□□□ -1.46
VPS50-202ENST00000305866 BZW2Q9Y6E2 419 aaKnown RBP5.93□□□□□ -1.46
VPS50-202ENST00000305866 PDCD11Q14690 1871 aaKnown RBP5.93□□□□□ -1.46
VPS50-202ENST00000305866 IGLV3-22A0A075B6J6 115 aa5.93□□□□□ -1.46
VPS50-202ENST00000305866 CCT8L1PA6NM43 557 aa5.93□□□□□ -1.46
VPS50-202ENST00000305866 NDUFAB1O14561 156 aa5.93□□□□□ -1.46
VPS50-202ENST00000305866 BACH1O14867 736 aa5.93□□□□□ -1.46
VPS50-202ENST00000305866 MAGEB2O15479 319 aa5.93□□□□□ -1.46
VPS50-202ENST00000305866 DAPK3O43293 454 aa5.93□□□□□ -1.46
VPS50-202ENST00000305866 RPA1P27694 616 aa5.93□□□□□ -1.46
VPS50-202ENST00000305866 TUBP50607 506 aa5.93□□□□□ -1.46
VPS50-202ENST00000305866 GUCY2FP51841 1108 aa5.93□□□□□ -1.46
VPS50-202ENST00000305866 SNRPFP62306 86 aaKnown RBP5.93□□□□□ -1.46
VPS50-202ENST00000305866 PSMC6P62333 389 aa5.93□□□□□ -1.46
VPS50-202ENST00000305866 FKBP3Q00688 224 aaKnown RBP5.93□□□□□ -1.46
VPS50-202ENST00000305866 PPP2R5CQ13362 524 aa5.93□□□□□ -1.46
VPS50-202ENST00000305866 AUHQ13825 339 aaKnown RBP5.93□□□□□ -1.46
VPS50-202ENST00000305866 CRYMQ14894 314 aa5.93□□□□□ -1.46
VPS50-202ENST00000305866 CALCRLQ16602 461 aa5.93□□□□□ -1.46
VPS50-202ENST00000305866 CCDC96Q2M329 555 aa5.93□□□□□ -1.46
VPS50-202ENST00000305866 ANKS1BQ7Z6G8 1248 aa5.93□□□□□ -1.46
VPS50-202ENST00000305866 KIAA1328Q86T90 577 aa5.93□□□□□ -1.46
VPS50-202ENST00000305866 RELL1Q8IUW5 271 aa5.93□□□□□ -1.46
VPS50-202ENST00000305866 ADGRF4Q8IZF3 695 aa5.93□□□□□ -1.46
VPS50-202ENST00000305866 PHC3Q8NDX5 983 aa5.93□□□□□ -1.46
VPS50-202ENST00000305866 DENND1AQ8TEH3 1009 aa5.93□□□□□ -1.46
VPS50-202ENST00000305866 ZNF483Q8TF39 744 aaPredicted RBP5.93□□□□□ -1.46
VPS50-202ENST00000305866 TGFBRAP1Q8WUH2 860 aa5.93□□□□□ -1.46
VPS50-202ENST00000305866 P3H4Q92791 437 aa5.93□□□□□ -1.46
VPS50-202ENST00000305866 AZIN2Q96A70 460 aa5.93□□□□□ -1.46
VPS50-202ENST00000305866 CRACR2AQ9BSW2 395 aa5.93□□□□□ -1.46
VPS50-202ENST00000305866 MKNK1Q9BUB5 465 aa5.93□□□□□ -1.46
VPS50-202ENST00000305866 RAB34Q9BZG1 259 aa5.93□□□□□ -1.46
VPS50-202ENST00000305866 OSGEPQ9NPF4 335 aa5.93□□□□□ -1.46
VPS50-202ENST00000305866 ABCF3Q9NUQ8 709 aa5.93□□□□□ -1.46
VPS50-202ENST00000305866 A8MUI8 341 aa5.93□□□□□ -1.46
VPS50-202ENST00000305866 PDXKO00764 312 aa5.93□□□□□ -1.46
VPS50-202ENST00000305866 LRRN2O75325 713 aa5.93□□□□□ -1.46
VPS50-202ENST00000305866 SLC8A3P57103 927 aa5.93□□□□□ -1.46
VPS50-202ENST00000305866 KCNA1Q09470 495 aa5.93□□□□□ -1.46
VPS50-202ENST00000305866 IFT88Q13099 833 aa5.93□□□□□ -1.46
VPS50-202ENST00000305866 MOGSQ13724 837 aa5.93□□□□□ -1.46
VPS50-202ENST00000305866 KIF22Q14807 665 aa5.93□□□□□ -1.46
VPS50-202ENST00000305866 GRIPAP1Q4V328 841 aa5.93□□□□□ -1.46
VPS50-202ENST00000305866 NIPA1Q7RTP0 329 aa5.93□□□□□ -1.46
VPS50-202ENST00000305866 EXOC3L1Q86VI1 746 aa5.93□□□□□ -1.46
VPS50-202ENST00000305866 CNBD1Q8NA66 436 aa5.93□□□□□ -1.46
VPS50-202ENST00000305866 MTMR14Q8NCE2 650 aa5.93□□□□□ -1.46
VPS50-202ENST00000305866 PLEKHO2Q8TD55 490 aa5.93□□□□□ -1.46
VPS50-202ENST00000305866 CCDC47Q96A33 483 aaKnown RBP5.93□□□□□ -1.46
VPS50-202ENST00000305866 CALML4Q96GE6 196 aa5.93□□□□□ -1.46
VPS50-202ENST00000305866 PIGSQ96S52 555 aa5.93□□□□□ -1.46
VPS50-202ENST00000305866 VPS33BQ9H267 617 aa5.93□□□□□ -1.46
VPS50-202ENST00000305866 DDX4Q9NQI0 724 aaKnown RBP5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms