RNA–Protein interactions for RNA: ENST00000301480.4

ZNF560-201, Transcript of zinc finger protein 560, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF560, Length 2,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560-201ENST00000301480 PCDHGB7Q9Y5F8 929 aa5.06□□□□□ -1.6
ZNF560-201ENST00000301480 ASTN2O75129 1339 aaPredicted RBP5.06□□□□□ -1.6
ZNF560-201ENST00000301480 TRAV6A0A075B6T7 132 aa5.06□□□□□ -1.6
ZNF560-201ENST00000301480 GOLGA8AA7E2F4 631 aa5.06□□□□□ -1.6
ZNF560-201ENST00000301480 NDC80O14777 642 aa5.06□□□□□ -1.6
ZNF560-201ENST00000301480 MGEA5O60502 916 aa5.06□□□□□ -1.6
ZNF560-201ENST00000301480 DIAPH2O60879 1101 aa5.06□□□□□ -1.6
ZNF560-201ENST00000301480 TADA3O75528 432 aa5.06□□□□□ -1.6
ZNF560-201ENST00000301480 PGRP06401 933 aa5.06□□□□□ -1.6
ZNF560-201ENST00000301480 SLC5A1P13866 664 aa5.06□□□□□ -1.6
ZNF560-201ENST00000301480 FUT4P22083 530 aa5.06□□□□□ -1.6
ZNF560-201ENST00000301480 DNAJB1P25685 340 aa5.06□□□□□ -1.6
ZNF560-201ENST00000301480 KRT20P35900 424 aa5.06□□□□□ -1.6
ZNF560-201ENST00000301480 CRKP46108 304 aa5.06□□□□□ -1.6
ZNF560-201ENST00000301480 ST13P50502 369 aaKnown RBP5.06□□□□□ -1.6
ZNF560-201ENST00000301480 PLTPP55058 493 aa5.06□□□□□ -1.6
ZNF560-201ENST00000301480 SP3Q02447 781 aa5.06□□□□□ -1.6
ZNF560-201ENST00000301480 PPATQ06203 517 aa5.06□□□□□ -1.6
ZNF560-201ENST00000301480 MCL1Q07820 350 aa5.06□□□□□ -1.6
ZNF560-201ENST00000301480 NFIAQ12857 509 aa5.06□□□□□ -1.6
ZNF560-201ENST00000301480 IKQ13123 557 aaPredicted RBP5.06□□□□□ -1.6
ZNF560-201ENST00000301480 PPIL2Q13356 520 aa5.06□□□□□ -1.6
ZNF560-201ENST00000301480 TUBB8Q3ZCM7 444 aa5.06□□□□□ -1.6
ZNF560-201ENST00000301480 NOL9Q5SY16 702 aaKnown RBP5.06□□□□□ -1.6
ZNF560-201ENST00000301480 POTEEQ6S8J3 1075 aa5.06□□□□□ -1.6
ZNF560-201ENST00000301480 INTS8Q75QN2 995 aaKnown RBP5.06□□□□□ -1.6
ZNF560-201ENST00000301480 SYTL1Q8IYJ3 562 aa5.06□□□□□ -1.6
ZNF560-201ENST00000301480 TBC1D21Q8IYX1 336 aa5.06□□□□□ -1.6
ZNF560-201ENST00000301480 MRPL50Q8N5N7 158 aaKnown RBP5.06□□□□□ -1.6
ZNF560-201ENST00000301480 SPATA5Q8NB90 893 aa5.06□□□□□ -1.6
ZNF560-201ENST00000301480 NEK11Q8NG66 645 aa5.06□□□□□ -1.6
ZNF560-201ENST00000301480 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.06□□□□□ -1.6
ZNF560-201ENST00000301480 ZNF606Q8WXB4 792 aa5.06□□□□□ -1.6
ZNF560-201ENST00000301480 PRMT6Q96LA8 375 aaPredicted RBP5.06□□□□□ -1.6
ZNF560-201ENST00000301480 UCN2Q96RP3 112 aa5.06□□□□□ -1.6
ZNF560-201ENST00000301480 ZNF341Q9BYN7 854 aa5.06□□□□□ -1.6
ZNF560-201ENST00000301480 HOMER3Q9NSC5 361 aa5.06□□□□□ -1.6
ZNF560-201ENST00000301480 DKK3Q9UBP4 350 aa5.06□□□□□ -1.6
ZNF560-201ENST00000301480 CXCL11O14625 94 aa5.05□□□□□ -1.6
ZNF560-201ENST00000301480 TTI1O43156 1089 aa5.05□□□□□ -1.6
ZNF560-201ENST00000301480 FGFR2P21802 821 aa5.05□□□□□ -1.6
ZNF560-201ENST00000301480 HNF1BP35680 557 aa5.05□□□□□ -1.6
ZNF560-201ENST00000301480 MRPL12P52815 198 aaKnown RBP5.05□□□□□ -1.6
ZNF560-201ENST00000301480 SLC12A2P55011 1212 aa5.05□□□□□ -1.6
ZNF560-201ENST00000301480 SNAPC2Q13487 334 aa5.05□□□□□ -1.6
ZNF560-201ENST00000301480 LRRFIP1Q32MZ4 808 aaKnown RBP5.05□□□□□ -1.6
ZNF560-201ENST00000301480 METTL24Q5JXM2 366 aa5.05□□□□□ -1.6
ZNF560-201ENST00000301480 THEMIS2Q5TEJ8 643 aa5.05□□□□□ -1.6
ZNF560-201ENST00000301480 ZNF600Q6ZNG1 722 aa5.05□□□□□ -1.6
ZNF560-201ENST00000301480 FCHSD1Q86WN1 690 aa5.05□□□□□ -1.6
ZNF560-201ENST00000301480 DDX42Q86XP3 938 aaKnown RBP eCLIP5.05□□□□□ -1.6
ZNF560-201ENST00000301480 SYCP3Q8IZU3 236 aa5.05□□□□□ -1.6
ZNF560-201ENST00000301480 VGLL2Q8N8G2 317 aa5.05□□□□□ -1.6
ZNF560-201ENST00000301480 NKX2-3Q8TAU0 364 aa5.05□□□□□ -1.6
ZNF560-201ENST00000301480 MDM1Q8TC05 714 aa5.05□□□□□ -1.6
ZNF560-201ENST00000301480 MTMR9Q96QG7 549 aa5.05□□□□□ -1.6
ZNF560-201ENST00000301480 TBCBQ99426 244 aa5.05□□□□□ -1.6
ZNF560-201ENST00000301480 JPH2Q9BR39 696 aaPredicted RBP5.05□□□□□ -1.6
ZNF560-201ENST00000301480 OXCT2Q9BYC2 517 aaPredicted RBP5.05□□□□□ -1.6
ZNF560-201ENST00000301480 B3GNT4Q9C0J1 378 aa5.05□□□□□ -1.6
ZNF560-201ENST00000301480 NRDE2Q9H7Z3 1164 aa5.05□□□□□ -1.6
ZNF560-201ENST00000301480 CYP4F11Q9HBI6 524 aa5.05□□□□□ -1.6
ZNF560-201ENST00000301480 ALG13Q9NP73 1137 aaKnown RBP5.05□□□□□ -1.6
ZNF560-201ENST00000301480 VTI1BQ9UEU0 232 aa5.05□□□□□ -1.6
ZNF560-201ENST00000301480 ZMIZ1Q9ULJ6 1067 aa5.05□□□□□ -1.6
ZNF560-201ENST00000301480 NOB1Q9ULX3 412 aaKnown RBP5.05□□□□□ -1.6
ZNF560-201ENST00000301480 PTPN22Q9Y2R2 807 aa5.05□□□□□ -1.6
ZNF560-201ENST00000301480 A0A1B0GUL6 1792 aa5.05□□□□□ -1.6
ZNF560-201ENST00000301480 EYA2O00167 538 aa5.05□□□□□ -1.6
ZNF560-201ENST00000301480 ZW10O43264 779 aa5.05□□□□□ -1.6
ZNF560-201ENST00000301480 MAP3K7O43318 606 aa5.05□□□□□ -1.6
ZNF560-201ENST00000301480 ENTPD3O75355 529 aa5.05□□□□□ -1.6
ZNF560-201ENST00000301480 CHKAP35790 457 aa5.05□□□□□ -1.6
ZNF560-201ENST00000301480 ETFBP38117 255 aa5.05□□□□□ -1.6
ZNF560-201ENST00000301480 IL15P40933 162 aaPredicted RBP5.05□□□□□ -1.6
ZNF560-201ENST00000301480 MAP2K5Q13163 448 aa5.05□□□□□ -1.6
ZNF560-201ENST00000301480 DPYSQ14117 519 aa5.05□□□□□ -1.6
ZNF560-201ENST00000301480 SSPNQ14714 243 aa5.05□□□□□ -1.6
ZNF560-201ENST00000301480 SH3D19Q5HYK7 790 aa5.05□□□□□ -1.6
ZNF560-201ENST00000301480 FBXW10Q5XX13 1052 aa5.05□□□□□ -1.6
ZNF560-201ENST00000301480 TMEM53Q6P2H8 277 aa5.05□□□□□ -1.6
ZNF560-201ENST00000301480 SHQ1Q6PI26 577 aaKnown RBP5.05□□□□□ -1.6
ZNF560-201ENST00000301480 OTOP1Q7RTM1 612 aa5.05□□□□□ -1.6
ZNF560-201ENST00000301480 TRMT2AQ8IZ69 625 aaKnown RBP5.05□□□□□ -1.6
ZNF560-201ENST00000301480 ZNF540Q8NDQ6 660 aa5.05□□□□□ -1.6
ZNF560-201ENST00000301480 NUP133Q8WUM0 1156 aa5.05□□□□□ -1.6
ZNF560-201ENST00000301480 FAM151AQ8WW52 585 aa5.05□□□□□ -1.6
ZNF560-201ENST00000301480 TEPSINQ96N21 525 aa5.05□□□□□ -1.6
ZNF560-201ENST00000301480 MTUS1Q9ULD2 1270 aa5.05□□□□□ -1.6
ZNF560-201ENST00000301480 DENND2AQ9ULE3 1009 aa5.05□□□□□ -1.6
ZNF560-201ENST00000301480 STRIP2Q9ULQ0 834 aa5.05□□□□□ -1.6
ZNF560-201ENST00000301480 COL2A1P02458 1487 aaPredicted RBP5.05□□□□□ -1.6
ZNF560-201ENST00000301480 RBBP6Q7Z6E9 1792 aaKnown RBP5.05□□□□□ -1.6
ZNF560-201ENST00000301480 POLR2AP24928 1970 aaKnown RBP5.04□□□□□ -1.6
ZNF560-201ENST00000301480 SSC5DA1L4H1 1573 aa5.04□□□□□ -1.6
ZNF560-201ENST00000301480 CYP2D7A0A087X1C5 515 aa5.04□□□□□ -1.6
ZNF560-201ENST00000301480 A0A1B0GUA9 196 aa5.04□□□□□ -1.6
ZNF560-201ENST00000301480 MCF2LO15068 1137 aa5.04□□□□□ -1.6
ZNF560-201ENST00000301480 POLR3GO15318 223 aaPredicted RBP5.04□□□□□ -1.6
ZNF560-201ENST00000301480 ATP8B1O43520 1251 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms