RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 BARX2Q9UMQ3 279 aaPredicted RBP10.59□□□□□ -0.71
CNOT9-202ENST00000295701 NFASCO94856 1347 aa10.58□□□□□ -0.71
CNOT9-202ENST00000295701 SMIM35A0A1B0GVV1 85 aa10.58□□□□□ -0.72
CNOT9-202ENST00000295701 ZBTB42B2RXF5 422 aa10.58□□□□□ -0.72
CNOT9-202ENST00000295701 M0QZ92 97 aa10.58□□□□□ -0.72
CNOT9-202ENST00000295701 MEIS1O00470 390 aa10.58□□□□□ -0.72
CNOT9-202ENST00000295701 STAG3L1P0CL83 205 aa10.58□□□□□ -0.72
CNOT9-202ENST00000295701 CD46P15529 392 aa10.58□□□□□ -0.72
CNOT9-202ENST00000295701 CDC27P30260 824 aa10.58□□□□□ -0.72
CNOT9-202ENST00000295701 CEP55Q53EZ4 464 aa10.58□□□□□ -0.72
CNOT9-202ENST00000295701 HERC4Q5GLZ8 1057 aaPredicted RBP10.58□□□□□ -0.72
CNOT9-202ENST00000295701 JAKMIP3Q5VZ66 844 aa10.58□□□□□ -0.72
CNOT9-202ENST00000295701 APOA5Q6Q788 366 aa10.58□□□□□ -0.72
CNOT9-202ENST00000295701 ABHD15Q6UXT9 468 aa10.58□□□□□ -0.72
CNOT9-202ENST00000295701 TRMT1LQ7Z2T5 733 aaKnown RBP10.58□□□□□ -0.72
CNOT9-202ENST00000295701 SGMS1Q86VZ5 419 aa10.58□□□□□ -0.72
CNOT9-202ENST00000295701 CCDC60Q8IWA6 550 aaPredicted RBP10.58□□□□□ -0.72
CNOT9-202ENST00000295701 KIAA0319LQ8IZA0 1049 aa10.58□□□□□ -0.72
CNOT9-202ENST00000295701 FTHL17Q9BXU8 183 aa10.58□□□□□ -0.72
CNOT9-202ENST00000295701 UPF3BQ9BZI7 483 aaKnown RBP10.58□□□□□ -0.72
CNOT9-202ENST00000295701 ERVK-5Q9HDB9 667 aa10.58□□□□□ -0.72
CNOT9-202ENST00000295701 ANO2Q9NQ90 1003 aa10.58□□□□□ -0.72
CNOT9-202ENST00000295701 FAM217BQ9NTX9 383 aaPredicted RBP10.58□□□□□ -0.72
CNOT9-202ENST00000295701 LRFN2Q9ULH4 789 aa10.58□□□□□ -0.72
CNOT9-202ENST00000295701 SQORQ9Y6N5 450 aa10.58□□□□□ -0.72
CNOT9-202ENST00000295701 KDM3AQ9Y4C1 1321 aa10.58□□□□□ -0.72
CNOT9-202ENST00000295701 IGKV6D-21A0A0A0MT36 114 aa10.57□□□□□ -0.72
CNOT9-202ENST00000295701 SMCO2A6NFE2 343 aa10.57□□□□□ -0.72
CNOT9-202ENST00000295701 TBKBP1A7MCY6 615 aa10.57□□□□□ -0.72
CNOT9-202ENST00000295701 FAM86B1E9PN63 330 aa10.57□□□□□ -0.72
CNOT9-202ENST00000295701 DHX15O43143 795 aaKnown RBP10.57□□□□□ -0.72
CNOT9-202ENST00000295701 EYA4O95677 639 aa10.57□□□□□ -0.72
CNOT9-202ENST00000295701 FAM86B2P0C5J1 330 aa10.57□□□□□ -0.72
CNOT9-202ENST00000295701 ZNF76P36508 570 aa10.57□□□□□ -0.72
CNOT9-202ENST00000295701 SARSP49591 514 aaKnown RBP10.57□□□□□ -0.72
CNOT9-202ENST00000295701 CLK2P49760 499 aaKnown RBP10.57□□□□□ -0.72
CNOT9-202ENST00000295701 MRE11P49959 708 aa10.57□□□□□ -0.72
CNOT9-202ENST00000295701 ADCY7P51828 1080 aa10.57□□□□□ -0.72
CNOT9-202ENST00000295701 ERVFC1P60507 584 aa10.57□□□□□ -0.72
CNOT9-202ENST00000295701 EXOSC10Q01780 885 aaKnown RBP10.57□□□□□ -0.72
CNOT9-202ENST00000295701 ADCK5Q3MIX3 580 aa10.57□□□□□ -0.72
CNOT9-202ENST00000295701 NAALADL2Q58DX5 795 aa10.57□□□□□ -0.72
CNOT9-202ENST00000295701 PLA2G2CQ5R387 149 aa10.57□□□□□ -0.72
CNOT9-202ENST00000295701 SPOUT1Q5T280 376 aaKnown RBP10.57□□□□□ -0.72
CNOT9-202ENST00000295701 SWSAP1Q6NVH7 229 aa10.57□□□□□ -0.72
CNOT9-202ENST00000295701 TRIM67Q6ZTA4 783 aa10.57□□□□□ -0.72
CNOT9-202ENST00000295701 PLA2G4DQ86XP0 818 aa10.57□□□□□ -0.72
CNOT9-202ENST00000295701 NME8Q8N427 588 aa10.57□□□□□ -0.72
CNOT9-202ENST00000295701 EFHBQ8N7U6 833 aa10.57□□□□□ -0.72
CNOT9-202ENST00000295701 VN1R2Q8NFZ6 395 aa10.57□□□□□ -0.72
CNOT9-202ENST00000295701 ADAM2Q99965 735 aa10.57□□□□□ -0.72
CNOT9-202ENST00000295701 ST3GAL5Q9UNP4 418 aa10.57□□□□□ -0.72
CNOT9-202ENST00000295701 PCDHB7Q9Y5E2 793 aa10.57□□□□□ -0.72
CNOT9-202ENST00000295701 ZDBF2Q9HCK1 2354 aa10.57□□□□□ -0.72
CNOT9-202ENST00000295701 LOC730098B7Z3J9 87 aa10.56□□□□□ -0.72
CNOT9-202ENST00000295701 C9IYK1 514 aa10.56□□□□□ -0.72
CNOT9-202ENST00000295701 BACH1O14867 736 aa10.56□□□□□ -0.72
CNOT9-202ENST00000295701 HBP1O60381 514 aa10.56□□□□□ -0.72
CNOT9-202ENST00000295701 RPS6KA5O75582 802 aa10.56□□□□□ -0.72
CNOT9-202ENST00000295701 VTNP04004 478 aa10.56□□□□□ -0.72
CNOT9-202ENST00000295701 FGFR1P11362 822 aa10.56□□□□□ -0.72
CNOT9-202ENST00000295701 CPA1P15085 419 aa10.56□□□□□ -0.72
CNOT9-202ENST00000295701 SREBF1P36956 1147 aa10.56□□□□□ -0.72
CNOT9-202ENST00000295701 APOBRQ0VD83 1088 aa10.56□□□□□ -0.72
CNOT9-202ENST00000295701 RTN1Q16799 776 aa10.56□□□□□ -0.72
CNOT9-202ENST00000295701 KIZQ2M2Z5 673 aa10.56□□□□□ -0.72
CNOT9-202ENST00000295701 PDXDC2PQ6P474 469 aa10.56□□□□□ -0.72
CNOT9-202ENST00000295701 BRICD5Q6PL45 260 aa10.56□□□□□ -0.72
CNOT9-202ENST00000295701 SYNE3Q6ZMZ3 975 aa10.56□□□□□ -0.72
CNOT9-202ENST00000295701 FAM228AQ86W67 206 aa10.56□□□□□ -0.72
CNOT9-202ENST00000295701 FAM160A2Q8N612 972 aaPredicted RBP10.56□□□□□ -0.72
CNOT9-202ENST00000295701 SMRP1Q8NCR6 262 aa10.56□□□□□ -0.72
CNOT9-202ENST00000295701 MICAL1Q8TDZ2 1067 aa10.56□□□□□ -0.72
CNOT9-202ENST00000295701 ATP8B4Q8TF62 1192 aa10.56□□□□□ -0.72
CNOT9-202ENST00000295701 EDAQ92838 391 aa10.56□□□□□ -0.72
CNOT9-202ENST00000295701 ZNF668Q96K58 619 aaPredicted RBP10.56□□□□□ -0.72
CNOT9-202ENST00000295701 NEK1Q96PY6 1258 aa10.56□□□□□ -0.72
CNOT9-202ENST00000295701 POP1Q99575 1024 aaKnown RBP10.56□□□□□ -0.72
CNOT9-202ENST00000295701 OSMRQ99650 979 aa10.56□□□□□ -0.72
CNOT9-202ENST00000295701 CWH43Q9H720 699 aa10.56□□□□□ -0.72
CNOT9-202ENST00000295701 TLE6Q9H808 572 aa10.56□□□□□ -0.72
CNOT9-202ENST00000295701 ZNF302Q9NR11 478 aa10.56□□□□□ -0.72
CNOT9-202ENST00000295701 RGS18Q9NS28 235 aa10.56□□□□□ -0.72
CNOT9-202ENST00000295701 TYW1Q9NV66 732 aaKnown RBP10.56□□□□□ -0.72
CNOT9-202ENST00000295701 BARHL2Q9NY43 387 aa10.56□□□□□ -0.72
CNOT9-202ENST00000295701 USP15Q9Y4E8 981 aaPredicted RBP10.56□□□□□ -0.72
CNOT9-202ENST00000295701 IGLV3-22A0A075B6J6 115 aa10.55□□□□□ -0.72
CNOT9-202ENST00000295701 DENND3A2RUS2 1198 aa10.55□□□□□ -0.72
CNOT9-202ENST00000295701 TMEM221A6NGB7 291 aa10.55□□□□□ -0.72
CNOT9-202ENST00000295701 M0R296 226 aa10.55□□□□□ -0.72
CNOT9-202ENST00000295701 ZBTB43O43298 467 aa10.55□□□□□ -0.72
CNOT9-202ENST00000295701 GPR32O75388 356 aa10.55□□□□□ -0.72
CNOT9-202ENST00000295701 FOSP01100 380 aaPredicted RBP10.55□□□□□ -0.72
CNOT9-202ENST00000295701 ADD1P35611 737 aaKnown RBP10.55□□□□□ -0.72
CNOT9-202ENST00000295701 COASYQ13057 564 aa10.55□□□□□ -0.72
CNOT9-202ENST00000295701 DSC3Q14574 896 aa10.55□□□□□ -0.72
CNOT9-202ENST00000295701 LRRC55Q6ZSA7 311 aa10.55□□□□□ -0.72
CNOT9-202ENST00000295701 COLGALT1Q8NBJ5 622 aa10.55□□□□□ -0.72
CNOT9-202ENST00000295701 PRSS33Q8NF86 280 aa10.55□□□□□ -0.72
CNOT9-202ENST00000295701 RPGRIP1Q96KN7 1286 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms