RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 CHMP2AO43633 222 aa16.58■□□□□ 0.24
DDX56-201ENST00000258772 CFBP00751 764 aa16.58■□□□□ 0.24
DDX56-201ENST00000258772 LMNB1P20700 586 aa16.58■□□□□ 0.24
DDX56-201ENST00000258772 LSP1P33241 339 aa16.58■□□□□ 0.24
DDX56-201ENST00000258772 DRAP1Q14919 205 aaPredicted RBP16.58■□□□□ 0.24
DDX56-201ENST00000258772 MEX3CQ5U5Q3 659 aaKnown RBP16.58■□□□□ 0.24
DDX56-201ENST00000258772 TADA2BQ86TJ2 420 aa16.58■□□□□ 0.24
DDX56-201ENST00000258772 PACS2Q86VP3 889 aa16.58■□□□□ 0.24
DDX56-201ENST00000258772 GLYCTKQ8IVS8 523 aa16.58■□□□□ 0.24
DDX56-201ENST00000258772 BBXQ8WY36 941 aaPredicted RBP16.58■□□□□ 0.24
DDX56-201ENST00000258772 NEUROG2Q9H2A3 272 aa16.58■□□□□ 0.24
DDX56-201ENST00000258772 AMFRQ9UKV5 643 aa16.58■□□□□ 0.24
DDX56-201ENST00000258772 SAMM50Q9Y512 469 aa16.58■□□□□ 0.24
DDX56-201ENST00000258772 H0YGN5 161 aa16.57■□□□□ 0.24
DDX56-201ENST00000258772 ECE2O60344 883 aa16.57■□□□□ 0.24
DDX56-201ENST00000258772 TRIM37O94972 964 aa16.57■□□□□ 0.24
DDX56-201ENST00000258772 ITGB3BPQ13352 177 aaPredicted RBP16.57■□□□□ 0.24
DDX56-201ENST00000258772 UAP1Q16222 522 aaPredicted RBP16.57■□□□□ 0.24
DDX56-201ENST00000258772 TTC31Q49AM3 519 aaPredicted RBP16.57■□□□□ 0.24
DDX56-201ENST00000258772 SLC35G2Q8TBE7 412 aa16.57■□□□□ 0.24
DDX56-201ENST00000258772 SLC5A5Q92911 643 aa16.57■□□□□ 0.24
DDX56-201ENST00000258772 EPN3Q9H201 632 aa16.57■□□□□ 0.24
DDX56-201ENST00000258772 SLITRK6Q9H5Y7 841 aa16.57■□□□□ 0.24
DDX56-201ENST00000258772 TDRD3Q9H7E2 651 aaKnown RBP16.57■□□□□ 0.24
DDX56-201ENST00000258772 OSGEPQ9NPF4 335 aa16.57■□□□□ 0.24
DDX56-201ENST00000258772 DMAC2Q9NW81 257 aa16.57■□□□□ 0.24
DDX56-201ENST00000258772 SEL1LQ9UBV2 794 aa16.57■□□□□ 0.24
DDX56-201ENST00000258772 AMACRQ9UHK6 382 aa16.57■□□□□ 0.24
DDX56-201ENST00000258772 NFS1Q9Y697 457 aa16.57■□□□□ 0.24
DDX56-201ENST00000258772 AFF2P51816 1311 aa16.57■□□□□ 0.24
DDX56-201ENST00000258772 CPP00450 1065 aa16.57■□□□□ 0.24
DDX56-201ENST00000258772 STAT2P52630 851 aa16.57■□□□□ 0.24
DDX56-201ENST00000258772 ZNF131P52739 623 aa16.57■□□□□ 0.24
DDX56-201ENST00000258772 CCDC26Q8TAB7 109 aa16.57■□□□□ 0.24
DDX56-201ENST00000258772 ZNF622Q969S3 477 aaKnown RBP eCLIP16.57■□□□□ 0.248e-7■■■□□ 14.9
DDX56-201ENST00000258772 SYT11Q9BT88 431 aa16.57■□□□□ 0.24
DDX56-201ENST00000258772 FRMD4BQ9Y2L6 1034 aa16.57■□□□□ 0.24
DDX56-201ENST00000258772 ATRNL1Q5VV63 1379 aa16.56■□□□□ 0.24
DDX56-201ENST00000258772 COL11A2P13942 1736 aaPredicted RBP16.56■□□□□ 0.24
DDX56-201ENST00000258772 GOLGA6L10A6NI86 522 aa16.56■□□□□ 0.24
DDX56-201ENST00000258772 BUB1BO60566 1050 aaPredicted RBP16.56■□□□□ 0.24
DDX56-201ENST00000258772 TMEM253P0C7T8 217 aa16.56■□□□□ 0.24
DDX56-201ENST00000258772 MDH1P40925 334 aaKnown RBP16.56■□□□□ 0.24
DDX56-201ENST00000258772 PRELPP51888 382 aa16.56■□□□□ 0.24
DDX56-201ENST00000258772 CBWD6Q4V339 395 aa16.56■□□□□ 0.24
DDX56-201ENST00000258772 CBWD3Q5JTY5 395 aa16.56■□□□□ 0.24
DDX56-201ENST00000258772 CBWD5Q5RIA9 395 aa16.56■□□□□ 0.24
DDX56-201ENST00000258772 HS2ST1Q7LGA3 356 aa16.56■□□□□ 0.24
DDX56-201ENST00000258772 FAM178BQ8IXR5 827 aa16.56■□□□□ 0.24
DDX56-201ENST00000258772 RFFLQ8WZ73 363 aa16.56■□□□□ 0.24
DDX56-201ENST00000258772 GPR88Q9GZN0 384 aa16.56■□□□□ 0.24
DDX56-201ENST00000258772 TTC7AQ9ULT0 858 aaPredicted RBP16.56■□□□□ 0.24
DDX56-201ENST00000258772 UBE4BO95155 1302 aa16.56■□□□□ 0.24
DDX56-201ENST00000258772 DAPK3O43293 454 aa16.56■□□□□ 0.24
DDX56-201ENST00000258772 ENTPD3O75355 529 aa16.56■□□□□ 0.24
DDX56-201ENST00000258772 PPP1R37O75864 691 aa16.56■□□□□ 0.24
DDX56-201ENST00000258772 CYP2J2P51589 502 aa16.56■□□□□ 0.24
DDX56-201ENST00000258772 PPATQ06203 517 aa16.56■□□□□ 0.24
DDX56-201ENST00000258772 TRAF1Q13077 416 aa16.56■□□□□ 0.24
DDX56-201ENST00000258772 B4GALNT4Q76KP1 1039 aa16.56■□□□□ 0.24
DDX56-201ENST00000258772 TEX2Q8IWB9 1127 aa16.56■□□□□ 0.24
DDX56-201ENST00000258772 SEC14L1Q92503 715 aa16.56■□□□□ 0.24
DDX56-201ENST00000258772 NACC1Q96RE7 527 aa16.56■□□□□ 0.24
DDX56-201ENST00000258772 AGPAT3Q9NRZ7 376 aa16.56■□□□□ 0.24
DDX56-201ENST00000258772 SLX4Q8IY92 1834 aa16.55■□□□□ 0.24
DDX56-201ENST00000258772 NCANO14594 1321 aa16.55■□□□□ 0.24
DDX56-201ENST00000258772 FRMPD4Q14CM0 1322 aa16.55■□□□□ 0.24
DDX56-201ENST00000258772 GCOM1H8Y6P7 765 aaPredicted RBP16.55■□□□□ 0.24
DDX56-201ENST00000258772 TTI1O43156 1089 aa16.55■□□□□ 0.24
DDX56-201ENST00000258772 GAS7O60861 476 aa16.55■□□□□ 0.24
DDX56-201ENST00000258772 MYZAPP0CAP1 466 aa16.55■□□□□ 0.24
DDX56-201ENST00000258772 MUTP22033 750 aa16.55■□□□□ 0.24
DDX56-201ENST00000258772 CTNNA1P35221 906 aaKnown RBP16.55■□□□□ 0.24
DDX56-201ENST00000258772 FLT3P36888 993 aa16.55■□□□□ 0.24
DDX56-201ENST00000258772 ECE1P42892 770 aa16.55■□□□□ 0.24
DDX56-201ENST00000258772 PPP2R5AQ15172 486 aa16.55■□□□□ 0.24
DDX56-201ENST00000258772 STXBP4Q6ZWJ1 553 aa16.55■□□□□ 0.24
DDX56-201ENST00000258772 COL23A1Q86Y22 540 aaPredicted RBP16.55■□□□□ 0.24
DDX56-201ENST00000258772 OR2W6PQ8NHA6 318 aa16.55■□□□□ 0.24
DDX56-201ENST00000258772 WRAP73Q9P2S5 460 aaPredicted RBP16.55■□□□□ 0.24
DDX56-201ENST00000258772 TRPC5Q9UL62 973 aaPredicted RBP16.55■□□□□ 0.24
DDX56-201ENST00000258772 PPP1R9AQ9ULJ8 1098 aa16.55■□□□□ 0.24
DDX56-201ENST00000258772 SYNPO2Q9UMS6 1093 aa16.55■□□□□ 0.24
DDX56-201ENST00000258772 POLR2MP0CAP2 368 aa16.54■□□□□ 0.24
DDX56-201ENST00000258772 TRIM49P0CI25 452 aa16.54■□□□□ 0.24
DDX56-201ENST00000258772 TRIM49CP0CI26 452 aa16.54■□□□□ 0.24
DDX56-201ENST00000258772 ABCB4P21439 1286 aa16.54■□□□□ 0.24
DDX56-201ENST00000258772 UBXN2AP68543 259 aa16.54■□□□□ 0.24
DDX56-201ENST00000258772 POU5F1Q01860 360 aaKnown RBP16.54■□□□□ 0.24
DDX56-201ENST00000258772 PTGISQ16647 500 aa16.54■□□□□ 0.24
DDX56-201ENST00000258772 KIAA1755Q5JYT7 1200 aa16.54■□□□□ 0.24
DDX56-201ENST00000258772 ODR4Q5SWX8 454 aa16.54■□□□□ 0.24
DDX56-201ENST00000258772 MICALL1Q8N3F8 863 aa16.54■□□□□ 0.24
DDX56-201ENST00000258772 CTNNBL1Q8WYA6 563 aaPredicted RBP16.54■□□□□ 0.24
DDX56-201ENST00000258772 CSRNP1Q96S65 589 aa16.54■□□□□ 0.24
DDX56-201ENST00000258772 CELF4Q9BZC1 486 aaKnown RBP16.54■□□□□ 0.24
DDX56-201ENST00000258772 INTS2Q9H0H0 1204 aaKnown RBP16.54■□□□□ 0.24
DDX56-201ENST00000258772 CENPHQ9H3R5 247 aa16.54■□□□□ 0.24
DDX56-201ENST00000258772 KCND2Q9NZV8 630 aa16.54■□□□□ 0.24
DDX56-201ENST00000258772 APEX2Q9UBZ4 518 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms