RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 RPA1P27694 616 aa20.59■□□□□ 0.89
SNX4-201ENST00000251775 RAPGEF1Q13905 1077 aa20.59■□□□□ 0.89
SNX4-201ENST00000251775 KCTD19Q17RG1 926 aaPredicted RBP20.59■□□□□ 0.89
SNX4-201ENST00000251775 STYK1Q6J9G0 422 aa20.59■□□□□ 0.89
SNX4-201ENST00000251775 FLAD1Q8NFF5 587 aa20.59■□□□□ 0.89
SNX4-201ENST00000251775 CYP2W1Q8TAV3 490 aa20.59■□□□□ 0.89
SNX4-201ENST00000251775 ACTRT1Q8TDG2 376 aa20.59■□□□□ 0.89
SNX4-201ENST00000251775 UBLCP1Q8WVY7 318 aaPredicted RBP20.59■□□□□ 0.89
SNX4-201ENST00000251775 MIEF2Q96C03 454 aa20.59■□□□□ 0.89
SNX4-201ENST00000251775 PRMT6Q96LA8 375 aaPredicted RBP20.59■□□□□ 0.89
SNX4-201ENST00000251775 SART1O43290 800 aaKnown RBP20.59■□□□□ 0.89
SNX4-201ENST00000251775 ENOX2Q16206 610 aaKnown RBP20.59■□□□□ 0.89
SNX4-201ENST00000251775 RBM26Q5T8P6 1007 aaKnown RBP20.59■□□□□ 0.89
SNX4-201ENST00000251775 SPICE1Q8N0Z3 855 aa20.59■□□□□ 0.89
SNX4-201ENST00000251775 SYT2Q8N9I0 419 aaPredicted RBP20.59■□□□□ 0.89
SNX4-201ENST00000251775 BANK1Q8NDB2 785 aa20.59■□□□□ 0.89
SNX4-201ENST00000251775 SCLT1Q96NL6 688 aa20.59■□□□□ 0.89
SNX4-201ENST00000251775 AP1M1Q9BXS5 423 aa20.59■□□□□ 0.89
SNX4-201ENST00000251775 MSH4O15457 936 aa20.58■□□□□ 0.89
SNX4-201ENST00000251775 CEP104O60308 925 aa20.58■□□□□ 0.89
SNX4-201ENST00000251775 FOSP01100 380 aaPredicted RBP20.58■□□□□ 0.89
SNX4-201ENST00000251775 KLHL30Q0D2K2 578 aa20.58■□□□□ 0.89
SNX4-201ENST00000251775 FAM133AQ8N9E0 248 aa20.58■□□□□ 0.89
SNX4-201ENST00000251775 ERMNQ8TAM6 284 aa20.58■□□□□ 0.89
SNX4-201ENST00000251775 CCT6BQ92526 530 aa20.58■□□□□ 0.89
SNX4-201ENST00000251775 PBKQ96KB5 322 aa20.58■□□□□ 0.89
SNX4-201ENST00000251775 REEP2Q9BRK0 252 aa20.58■□□□□ 0.89
SNX4-201ENST00000251775 AIPL1Q9NZN9 384 aa20.58■□□□□ 0.89
SNX4-201ENST00000251775 DNM3Q9UQ16 869 aa20.58■□□□□ 0.89
SNX4-201ENST00000251775 ENTPD3O75355 529 aa20.58■□□□□ 0.88
SNX4-201ENST00000251775 ZBTB48P10074 688 aaPredicted RBP20.58■□□□□ 0.88
SNX4-201ENST00000251775 HOXD13P35453 343 aa20.58■□□□□ 0.88
SNX4-201ENST00000251775 MAGOHP61326 146 aaKnown RBP20.58■□□□□ 0.88
SNX4-201ENST00000251775 EDRF1Q3B7T1 1238 aa20.58■□□□□ 0.88
SNX4-201ENST00000251775 BTNL9Q6UXG8 535 aa20.58■□□□□ 0.88
SNX4-201ENST00000251775 ARMC9Q7Z3E5 817 aa20.58■□□□□ 0.88
SNX4-201ENST00000251775 SFR1Q86XK3 245 aa20.58■□□□□ 0.88
SNX4-201ENST00000251775 MAGOHBQ96A72 148 aaKnown RBP20.58■□□□□ 0.88
SNX4-201ENST00000251775 DDX47Q9H0S4 455 aaKnown RBP20.58■□□□□ 0.88
SNX4-201ENST00000251775 LRRC4CQ9HCJ2 640 aa20.58■□□□□ 0.88
SNX4-201ENST00000251775 BTNL10A8MVZ5 291 aa20.57■□□□□ 0.88
SNX4-201ENST00000251775 PHF20L1A8MW92 1017 aa20.57■□□□□ 0.88
SNX4-201ENST00000251775 CIITAP33076 1130 aa20.57■□□□□ 0.88
SNX4-201ENST00000251775 CALR3Q96L12 384 aaKnown RBP20.57■□□□□ 0.88
SNX4-201ENST00000251775 FAM20AQ96MK3 541 aa20.57■□□□□ 0.88
SNX4-201ENST00000251775 VAV3Q9UKW4 847 aa20.57■□□□□ 0.88
SNX4-201ENST00000251775 PRR12Q9ULL5 1215 aa20.57■□□□□ 0.88
SNX4-201ENST00000251775 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.57■□□□□ 0.88
SNX4-201ENST00000251775 ATP2C2O75185 946 aa20.57■□□□□ 0.88
SNX4-201ENST00000251775 DRD4P21917 467 aa20.57■□□□□ 0.88
SNX4-201ENST00000251775 NR2F2P24468 414 aa20.57■□□□□ 0.88
SNX4-201ENST00000251775 CYP4A11Q02928 519 aa20.57■□□□□ 0.88
SNX4-201ENST00000251775 MTMR3Q13615 1198 aa20.57■□□□□ 0.88
SNX4-201ENST00000251775 GKAP1Q5VSY0 366 aaPredicted RBP20.57■□□□□ 0.88
SNX4-201ENST00000251775 PPP4R3CPQ6ZMV5 832 aa20.57■□□□□ 0.88
SNX4-201ENST00000251775 BCAS3Q9H6U6 928 aa20.57■□□□□ 0.88
SNX4-201ENST00000251775 CETN3O15182 167 aa20.56■□□□□ 0.88
SNX4-201ENST00000251775 KCNH2Q12809 1159 aa20.56■□□□□ 0.88
SNX4-201ENST00000251775 TMC3Q7Z5M5 1100 aa20.56■□□□□ 0.88
SNX4-201ENST00000251775 LRRC57Q8N9N7 239 aa20.56■□□□□ 0.88
SNX4-201ENST00000251775 HVCN1Q96D96 273 aa20.56■□□□□ 0.88
SNX4-201ENST00000251775 CSRNP1Q96S65 589 aa20.56■□□□□ 0.88
SNX4-201ENST00000251775 NOC2LQ9Y3T9 749 aaKnown RBP20.56■□□□□ 0.88
SNX4-201ENST00000251775 RSPH10B2B2RC85 870 aa20.56■□□□□ 0.88
SNX4-201ENST00000251775 DAPK3O43293 454 aa20.56■□□□□ 0.88
SNX4-201ENST00000251775 MGRN1O60291 552 aa20.56■□□□□ 0.88
SNX4-201ENST00000251775 DNAJC8O75937 253 aaPredicted RBP20.56■□□□□ 0.88
SNX4-201ENST00000251775 RSPH10BP0C881 870 aa20.56■□□□□ 0.88
SNX4-201ENST00000251775 E2F5Q15329 346 aa20.56■□□□□ 0.88
SNX4-201ENST00000251775 ASIC2Q16515 512 aa20.56■□□□□ 0.88
SNX4-201ENST00000251775 PTPROQ16827 1216 aa20.56■□□□□ 0.88
SNX4-201ENST00000251775 KIAA1755Q5JYT7 1200 aa20.56■□□□□ 0.88
SNX4-201ENST00000251775 EPM2AIP1Q7L775 607 aaPredicted RBP20.56■□□□□ 0.88
SNX4-201ENST00000251775 P3H4Q92791 437 aa20.56■□□□□ 0.88
SNX4-201ENST00000251775 GANQ9H2C0 597 aa20.56■□□□□ 0.88
SNX4-201ENST00000251775 KDM4CQ9H3R0 1056 aa20.56■□□□□ 0.88
SNX4-201ENST00000251775 TRAF3IP3Q9Y228 551 aa20.56■□□□□ 0.88
SNX4-201ENST00000251775 PGRMC1O00264 195 aaKnown RBP20.55■□□□□ 0.88
SNX4-201ENST00000251775 EML1O00423 815 aa20.55■□□□□ 0.88
SNX4-201ENST00000251775 EZRP15311 586 aaKnown RBP20.55■□□□□ 0.88
SNX4-201ENST00000251775 ECE1P42892 770 aa20.55■□□□□ 0.88
SNX4-201ENST00000251775 SLC30A10Q6XR72 485 aa20.55■□□□□ 0.88
SNX4-201ENST00000251775 CPLX4Q7Z7G2 160 aa20.55■□□□□ 0.88
SNX4-201ENST00000251775 TAX1BP1Q86VP1 789 aa20.55■□□□□ 0.88
SNX4-201ENST00000251775 METTL13Q8N6R0 699 aa20.55■□□□□ 0.88
SNX4-201ENST00000251775 C7orf43Q8WVR3 580 aa20.55■□□□□ 0.88
SNX4-201ENST00000251775 YDJCA8MPS7 323 aa20.55■□□□□ 0.88
SNX4-201ENST00000251775 GHRP10912 638 aa20.55■□□□□ 0.88
SNX4-201ENST00000251775 IFFO1Q0D2I5 559 aa20.55■□□□□ 0.88
SNX4-201ENST00000251775 KNOP1Q1ED39 458 aaKnown RBP20.55■□□□□ 0.88
SNX4-201ENST00000251775 TLDC1Q6P9B6 456 aa20.55■□□□□ 0.88
SNX4-201ENST00000251775 EP400NLQ6ZTU2 488 aa20.55■□□□□ 0.88
SNX4-201ENST00000251775 FAM212AQ96EL1 285 aa20.55■□□□□ 0.88
SNX4-201ENST00000251775 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.55■□□□□ 0.88
SNX4-201ENST00000251775 BHMT2Q9H2M3 363 aa20.55■□□□□ 0.88
SNX4-201ENST00000251775 RGL1Q9NZL6 768 aa20.55■□□□□ 0.88
SNX4-201ENST00000251775 AMACRQ9UHK6 382 aa20.55■□□□□ 0.88
SNX4-201ENST00000251775 KRT71Q3SY84 523 aa20.54■□□□□ 0.88
SNX4-201ENST00000251775 EIF2AK1Q9BQI3 630 aaKnown RBP20.54■□□□□ 0.88
SNX4-201ENST00000251775 RUSC1Q9BVN2 902 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms