RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 DENND4BO75064 1496 aaPredicted RBP11.84□□□□□ -0.51
MSH6-201ENST00000234420 RARS2Q5T160 578 aaKnown RBP11.84□□□□□ -0.51
MSH6-201ENST00000234420 NEK9Q8TD19 979 aa11.84□□□□□ -0.51
MSH6-201ENST00000234420 GINS4Q9BRT9 223 aa11.84□□□□□ -0.51
MSH6-201ENST00000234420 LGR6Q9HBX8 967 aa11.84□□□□□ -0.51
MSH6-201ENST00000234420 GMNCA6NCL1 334 aa11.83□□□□□ -0.52
MSH6-201ENST00000234420 CLIC2O15247 247 aa11.83□□□□□ -0.52
MSH6-201ENST00000234420 DEFA1P59665 94 aa11.83□□□□□ -0.52
MSH6-201ENST00000234420 DEFA3P59666 94 aa11.83□□□□□ -0.52
MSH6-201ENST00000234420 ZNF394Q53GI3 561 aa11.83□□□□□ -0.52
MSH6-201ENST00000234420 SLC27A3Q5K4L6 730 aa11.83□□□□□ -0.52
MSH6-201ENST00000234420 LRRC8BQ6P9F7 803 aa11.83□□□□□ -0.52
MSH6-201ENST00000234420 NOSTRINQ8IVI9 506 aa11.83□□□□□ -0.52
MSH6-201ENST00000234420 PPP2R3CQ969Q6 453 aa11.83□□□□□ -0.52
MSH6-201ENST00000234420 APOBEC2Q9Y235 224 aaKnown RBP11.83□□□□□ -0.52
MSH6-201ENST00000234420 MOCS2O96007 188 aaPredicted RBP11.83□□□□□ -0.52
MSH6-201ENST00000234420 CEP170P1Q96L14 293 aa11.83□□□□□ -0.52
MSH6-201ENST00000234420 HSPA4LO95757 839 aa11.83□□□□□ -0.52
MSH6-201ENST00000234420 EPB42P16452 691 aa11.83□□□□□ -0.52
MSH6-201ENST00000234420 CAPZA2P47755 286 aa11.83□□□□□ -0.52
MSH6-201ENST00000234420 RALGDSQ12967 914 aa11.83□□□□□ -0.52
MSH6-201ENST00000234420 TRIM25Q14258 630 aaKnown RBP11.83□□□□□ -0.52
MSH6-201ENST00000234420 SPARCL1Q14515 664 aa11.83□□□□□ -0.52
MSH6-201ENST00000234420 DMC1Q14565 340 aa11.83□□□□□ -0.52
MSH6-201ENST00000234420 CIAPIN1Q6FI81 312 aa11.83□□□□□ -0.52
MSH6-201ENST00000234420 GPT2Q8TD30 523 aa11.83□□□□□ -0.52
MSH6-201ENST00000234420 DEPDC1BQ8WUY9 529 aa11.83□□□□□ -0.52
MSH6-201ENST00000234420 CNBD2Q96M20 576 aa11.83□□□□□ -0.52
MSH6-201ENST00000234420 CALN1Q9BXU9 219 aa11.83□□□□□ -0.52
MSH6-201ENST00000234420 GGT7Q9UJ14 662 aa11.83□□□□□ -0.52
MSH6-201ENST00000234420 ZC3H4Q9UPT8 1303 aaKnown RBP11.83□□□□□ -0.52
MSH6-201ENST00000234420 USP17L12C9JPN9 530 aa11.83□□□□□ -0.52
MSH6-201ENST00000234420 USP17L21D6R901 530 aa11.83□□□□□ -0.52
MSH6-201ENST00000234420 AFPP02771 609 aaKnown RBP11.83□□□□□ -0.52
MSH6-201ENST00000234420 PRAMEP78395 509 aa11.83□□□□□ -0.52
MSH6-201ENST00000234420 OLFML1Q6UWY5 402 aa11.83□□□□□ -0.52
MSH6-201ENST00000234420 TMEM245Q9H330 911 aa11.83□□□□□ -0.52
MSH6-201ENST00000234420 JAK2O60674 1132 aa11.83□□□□□ -0.52
MSH6-201ENST00000234420 FTCDO95954 541 aa11.83□□□□□ -0.52
MSH6-201ENST00000234420 UBTFL6P0CB48 400 aaPredicted RBP11.83□□□□□ -0.52
MSH6-201ENST00000234420 HSPD1P10809 573 aaKnown RBP11.83□□□□□ -0.52
MSH6-201ENST00000234420 PARP10Q53GL7 1025 aa11.83□□□□□ -0.52
MSH6-201ENST00000234420 AP1M1Q9BXS5 423 aa11.83□□□□□ -0.52
MSH6-201ENST00000234420 GEMIN8Q9NWZ8 242 aaKnown RBP11.83□□□□□ -0.52
MSH6-201ENST00000234420 LRRC9Q6ZRR7 1453 aa11.83□□□□□ -0.52
MSH6-201ENST00000234420 KIAA1107Q9UPP5 1409 aa11.83□□□□□ -0.52
MSH6-201ENST00000234420 LINC00854A0A1B0GVQ3 168 aa11.83□□□□□ -0.52
MSH6-201ENST00000234420 DLGAP2Q9P1A6 1054 aa11.83□□□□□ -0.52
MSH6-201ENST00000234420 RPS8P62241 208 aaKnown RBP11.82□□□□□ -0.52
MSH6-201ENST00000234420 SLFN13Q68D06 897 aa11.82□□□□□ -0.52
MSH6-201ENST00000234420 NUDT18Q6ZVK8 323 aa11.82□□□□□ -0.52
MSH6-201ENST00000234420 CATSPER4Q7RTX7 472 aa11.82□□□□□ -0.52
MSH6-201ENST00000234420 HIC2Q96JB3 615 aa11.82□□□□□ -0.52
MSH6-201ENST00000234420 GNA14O95837 355 aa11.82□□□□□ -0.52
MSH6-201ENST00000234420 PPP3CCP48454 512 aa11.82□□□□□ -0.52
MSH6-201ENST00000234420 NDUFAF2Q8N183 169 aa11.82□□□□□ -0.52
MSH6-201ENST00000234420 APPL2Q8NEU8 664 aa11.82□□□□□ -0.52
MSH6-201ENST00000234420 SOX13Q9UN79 622 aa11.82□□□□□ -0.52
MSH6-201ENST00000234420 SRGAP2O75044 1071 aa11.82□□□□□ -0.52
MSH6-201ENST00000234420 ANP32DO95626 131 aa11.82□□□□□ -0.52
MSH6-201ENST00000234420 ECEL1O95672 775 aa11.82□□□□□ -0.52
MSH6-201ENST00000234420 CTTNQ14247 550 aaKnown RBP11.82□□□□□ -0.52
MSH6-201ENST00000234420 BZW1Q7L1Q6 419 aaKnown RBP11.82□□□□□ -0.52
MSH6-201ENST00000234420 PCDHB7Q9Y5E2 793 aa11.82□□□□□ -0.52
MSH6-201ENST00000234420 MAP3K5Q99683 1374 aa11.82□□□□□ -0.52
MSH6-201ENST00000234420 E5RI56 91 aa11.82□□□□□ -0.52
MSH6-201ENST00000234420 AARSP49588 968 aaKnown RBP eCLIP11.82□□□□□ -0.528e-6■■■■■ 52.4
MSH6-201ENST00000234420 LBRQ14739 615 aaKnown RBP11.82□□□□□ -0.52
MSH6-201ENST00000234420 PRAMEF18Q5VWM3 479 aa11.82□□□□□ -0.52
MSH6-201ENST00000234420 CFAP73A6NFT4 308 aa11.82□□□□□ -0.52
MSH6-201ENST00000234420 GOLGA8JA6NMD2 632 aa11.82□□□□□ -0.52
MSH6-201ENST00000234420 ADCY2Q08462 1091 aa11.82□□□□□ -0.52
MSH6-201ENST00000234420 NLRP14Q86W24 1093 aa11.82□□□□□ -0.52
MSH6-201ENST00000234420 SEPT12Q8IYM1 358 aa11.82□□□□□ -0.52
MSH6-201ENST00000234420 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.82□□□□□ -0.52
MSH6-201ENST00000234420 GJA10Q969M2 543 aa11.82□□□□□ -0.52
MSH6-201ENST00000234420 BTBD6Q96KE9 485 aa11.82□□□□□ -0.52
MSH6-201ENST00000234420 SLC27A2O14975 620 aa11.82□□□□□ -0.52
MSH6-201ENST00000234420 HAUS5O94927 633 aa11.82□□□□□ -0.52
MSH6-201ENST00000234420 GNAT1P11488 350 aa11.82□□□□□ -0.52
MSH6-201ENST00000234420 DDX5P17844 614 aaKnown RBP11.82□□□□□ -0.52
MSH6-201ENST00000234420 MAGOHP61326 146 aaKnown RBP11.82□□□□□ -0.52
MSH6-201ENST00000234420 CHMP1BQ7LBR1 199 aa11.82□□□□□ -0.52
MSH6-201ENST00000234420 RHPN2Q8IUC4 686 aa11.82□□□□□ -0.52
MSH6-201ENST00000234420 TTLL6Q8N841 843 aa11.82□□□□□ -0.52
MSH6-201ENST00000234420 ELP3Q9H9T3 547 aa11.82□□□□□ -0.52
MSH6-201ENST00000234420 MCM8Q9UJA3 840 aa11.82□□□□□ -0.52
MSH6-201ENST00000234420 CCDC195A0A1B0GUA6 201 aa11.81□□□□□ -0.52
MSH6-201ENST00000234420 TMEM247A6NEH6 219 aa11.81□□□□□ -0.52
MSH6-201ENST00000234420 PFKFB1P16118 471 aa11.81□□□□□ -0.52
MSH6-201ENST00000234420 MED21Q13503 144 aa11.81□□□□□ -0.52
MSH6-201ENST00000234420 ADALQ6DHV7 355 aa11.81□□□□□ -0.52
MSH6-201ENST00000234420 LLPHQ9BRT6 129 aaKnown RBP11.81□□□□□ -0.52
MSH6-201ENST00000234420 SRP68Q9UHB9 627 aaKnown RBP11.81□□□□□ -0.52
MSH6-201ENST00000234420 PGRMC1O00264 195 aaKnown RBP11.81□□□□□ -0.52
MSH6-201ENST00000234420 XPO1O14980 1071 aaKnown RBP11.81□□□□□ -0.52
MSH6-201ENST00000234420 EIF2AK2P19525 551 aaKnown RBP11.81□□□□□ -0.52
MSH6-201ENST00000234420 RBL2Q08999 1139 aa11.81□□□□□ -0.52
MSH6-201ENST00000234420 TRIM48Q8IWZ4 208 aa11.81□□□□□ -0.52
MSH6-201ENST00000234420 GSPT2Q8IYD1 628 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms