RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 NDFIP2Q9NV92 336 aa14.15□□□□□ -0.14
COL1A1-201ENST00000225964 TMEM259Q4ZIN3 620 aa14.15□□□□□ -0.14
COL1A1-201ENST00000225964 TAS2R42Q7RTR8 314 aa14.15□□□□□ -0.14
COL1A1-201ENST00000225964 ULK4Q96C45 1275 aa14.15□□□□□ -0.14
COL1A1-201ENST00000225964 L3MBTL1Q9Y468 752 aa14.15□□□□□ -0.14
COL1A1-201ENST00000225964 CFAP69A5D8W1 941 aa14.15□□□□□ -0.14
COL1A1-201ENST00000225964 ACSL3O95573 720 aa14.15□□□□□ -0.14
COL1A1-201ENST00000225964 SETSIPP0DME0 302 aa14.15□□□□□ -0.14
COL1A1-201ENST00000225964 CCNE1P24864 410 aa14.15□□□□□ -0.14
COL1A1-201ENST00000225964 ADAM22Q9P0K1 906 aa14.15□□□□□ -0.14
COL1A1-201ENST00000225964 CLCA2Q9UQC9 943 aa14.15□□□□□ -0.14
COL1A1-201ENST00000225964 CDC42BPGQ6DT37 1551 aa14.15□□□□□ -0.14
COL1A1-201ENST00000225964 USP17L10C9JJH3 530 aa14.15□□□□□ -0.14
COL1A1-201ENST00000225964 ZBTB5O15062 677 aa14.15□□□□□ -0.14
COL1A1-201ENST00000225964 SSTR3P32745 418 aaPredicted RBP14.15□□□□□ -0.14
COL1A1-201ENST00000225964 KRT80Q6KB66 452 aa14.15□□□□□ -0.14
COL1A1-201ENST00000225964 TTC23LQ6PF05 361 aa14.15□□□□□ -0.14
COL1A1-201ENST00000225964 TMEM270Q6UE05 265 aa14.15□□□□□ -0.14
COL1A1-201ENST00000225964 TOGARAM2Q6ZUX3 1019 aa14.15□□□□□ -0.14
COL1A1-201ENST00000225964 EGFL8Q99944 293 aa14.15□□□□□ -0.14
COL1A1-201ENST00000225964 GCOM2Q9BZD3 368 aaPredicted RBP14.15□□□□□ -0.14
COL1A1-201ENST00000225964 POLR3FQ9H1D9 316 aaPredicted RBP14.15□□□□□ -0.14
COL1A1-201ENST00000225964 DNAJC12Q9UKB3 198 aa14.15□□□□□ -0.14
COL1A1-201ENST00000225964 PHLPP2Q6ZVD8 1323 aa14.15□□□□□ -0.14
COL1A1-201ENST00000225964 ANKARQ7Z5J8 1434 aa14.15□□□□□ -0.14
COL1A1-201ENST00000225964 DNAJC6O75061 913 aa14.15□□□□□ -0.14
COL1A1-201ENST00000225964 RPSAP08865 295 aaKnown RBP14.15□□□□□ -0.14
COL1A1-201ENST00000225964 CA4P22748 312 aa14.15□□□□□ -0.14
COL1A1-201ENST00000225964 CRLF3Q8IUI8 442 aa14.15□□□□□ -0.14
COL1A1-201ENST00000225964 LRRC63Q05C16 580 aa14.15□□□□□ -0.14
COL1A1-201ENST00000225964 CC2D1AQ6P1N0 951 aaPredicted RBP14.15□□□□□ -0.14
COL1A1-201ENST00000225964 PDIK1LQ8N165 341 aa14.15□□□□□ -0.14
COL1A1-201ENST00000225964 NDST4Q9H3R1 872 aa14.15□□□□□ -0.14
COL1A1-201ENST00000225964 RNF146Q9NTX7 359 aa14.15□□□□□ -0.14
COL1A1-201ENST00000225964 CAPN11Q9UMQ6 739 aa14.15□□□□□ -0.14
COL1A1-201ENST00000225964 DFFAO00273 331 aa14.14□□□□□ -0.15
COL1A1-201ENST00000225964 KITP10721 976 aa14.14□□□□□ -0.15
COL1A1-201ENST00000225964 EEF1DP29692 281 aaKnown RBP14.14□□□□□ -0.15
COL1A1-201ENST00000225964 CHAMP1Q96JM3 812 aa14.14□□□□□ -0.15
COL1A1-201ENST00000225964 TEX12Q9BXU0 123 aa14.14□□□□□ -0.15
COL1A1-201ENST00000225964 UPF3AQ9H1J1 476 aaKnown RBP14.14□□□□□ -0.15
COL1A1-201ENST00000225964 TRIM45Q9H8W5 580 aaPredicted RBP14.14□□□□□ -0.15
COL1A1-201ENST00000225964 NSUN6Q8TEA1 469 aaKnown RBP14.14□□□□□ -0.15
COL1A1-201ENST00000225964 TTC17Q96AE7 1141 aa14.14□□□□□ -0.15
COL1A1-201ENST00000225964 SLC4A7Q9Y6M7 1214 aa14.14□□□□□ -0.15
COL1A1-201ENST00000225964 RASGRF2O14827 1237 aa14.14□□□□□ -0.15
COL1A1-201ENST00000225964 HSP90AA5PQ58FG0 334 aa14.14□□□□□ -0.15
COL1A1-201ENST00000225964 PADI6Q6TGC4 694 aa14.14□□□□□ -0.15
COL1A1-201ENST00000225964 OR6J1Q8NGC5 347 aa14.14□□□□□ -0.15
COL1A1-201ENST00000225964 TTC8Q8TAM2 541 aa14.14□□□□□ -0.15
COL1A1-201ENST00000225964 MORC4Q8TE76 937 aa14.14□□□□□ -0.15
COL1A1-201ENST00000225964 HEMGNQ9BXL5 484 aa14.14□□□□□ -0.15
COL1A1-201ENST00000225964 MAP3K20Q9NYL2 800 aaKnown RBP14.14□□□□□ -0.15
COL1A1-201ENST00000225964 KIF17Q9P2E2 1029 aa14.14□□□□□ -0.15
COL1A1-201ENST00000225964 GABBR1Q9UBS5 961 aa14.14□□□□□ -0.15
COL1A1-201ENST00000225964 AFF2P51816 1311 aa14.14□□□□□ -0.15
COL1A1-201ENST00000225964 CCDC195A0A1B0GUA6 201 aa14.14□□□□□ -0.15
COL1A1-201ENST00000225964 VEPH1Q14D04 833 aa14.14□□□□□ -0.15
COL1A1-201ENST00000225964 TBC1D9BQ66K14 1250 aa14.14□□□□□ -0.15
COL1A1-201ENST00000225964 MB21D1Q8N884 522 aa14.14□□□□□ -0.15
COL1A1-201ENST00000225964 MCPH1Q8NEM0 835 aa14.14□□□□□ -0.15
COL1A1-201ENST00000225964 SCG3Q8WXD2 468 aaKnown RBP14.14□□□□□ -0.15
COL1A1-201ENST00000225964 ACAP3Q96P50 834 aa14.14□□□□□ -0.15
COL1A1-201ENST00000225964 FMO2Q99518 471 aa14.14□□□□□ -0.15
COL1A1-201ENST00000225964 TUBB6Q9BUF5 446 aa14.14□□□□□ -0.15
COL1A1-201ENST00000225964 NOVA2Q9UNW9 492 aaKnown RBP14.14□□□□□ -0.15
COL1A1-201ENST00000225964 SETD1BQ9UPS6 1966 aaKnown RBP14.14□□□□□ -0.15
COL1A1-201ENST00000225964 SH3BGRP55822 239 aaPredicted RBP14.14□□□□□ -0.15
COL1A1-201ENST00000225964 HLFQ16534 295 aa14.14□□□□□ -0.15
COL1A1-201ENST00000225964 C2orf40Q9H1Z8 148 aa14.14□□□□□ -0.15
COL1A1-201ENST00000225964 FAM217BQ9NTX9 383 aaPredicted RBP14.14□□□□□ -0.15
COL1A1-201ENST00000225964 UBA6A0AVT1 1052 aaPredicted RBP14.13□□□□□ -0.15
COL1A1-201ENST00000225964 CTNND1O60716 968 aaKnown RBP14.13□□□□□ -0.15
COL1A1-201ENST00000225964 E2F6O75461 281 aa14.13□□□□□ -0.15
COL1A1-201ENST00000225964 MAP2K2P36507 400 aa14.13□□□□□ -0.15
COL1A1-201ENST00000225964 TXLNGQ9NUQ3 528 aa14.13□□□□□ -0.15
COL1A1-201ENST00000225964 STAP2Q9UGK3 403 aa14.13□□□□□ -0.15
COL1A1-201ENST00000225964 CAPN15O75808 1086 aa14.13□□□□□ -0.15
COL1A1-201ENST00000225964 LCP1P13796 627 aa14.13□□□□□ -0.15
COL1A1-201ENST00000225964 GPSM2P81274 684 aa14.13□□□□□ -0.15
COL1A1-201ENST00000225964 HDLBPQ00341 1268 aaKnown RBP14.13□□□□□ -0.15
COL1A1-201ENST00000225964 TAF11Q15544 211 aa14.13□□□□□ -0.15
COL1A1-201ENST00000225964 THEMIS2Q5TEJ8 643 aa14.13□□□□□ -0.15
COL1A1-201ENST00000225964 SFR1Q86XK3 245 aa14.13□□□□□ -0.15
COL1A1-201ENST00000225964 AIFM3Q96NN9 605 aa14.13□□□□□ -0.15
COL1A1-201ENST00000225964 CNOT8Q9UFF9 292 aaKnown RBP14.13□□□□□ -0.15
COL1A1-201ENST00000225964 ESRRAP11474 423 aaPredicted RBP14.13□□□□□ -0.15
COL1A1-201ENST00000225964 GRIK1P39086 918 aa14.13□□□□□ -0.15
COL1A1-201ENST00000225964 MAGEB5Q9BZ81 275 aa14.13□□□□□ -0.15
COL1A1-201ENST00000225964 METP08581 1390 aa14.13□□□□□ -0.15
COL1A1-201ENST00000225964 IKBKBO14920 756 aa14.13□□□□□ -0.15
COL1A1-201ENST00000225964 RALAP11233 206 aa14.13□□□□□ -0.15
COL1A1-201ENST00000225964 GCLMP48507 274 aa14.13□□□□□ -0.15
COL1A1-201ENST00000225964 POU5F1BQ06416 359 aa14.13□□□□□ -0.15
COL1A1-201ENST00000225964 SMAD1Q15797 465 aaKnown RBP14.13□□□□□ -0.15
COL1A1-201ENST00000225964 THOC1Q96FV9 657 aaKnown RBP14.13□□□□□ -0.15
COL1A1-201ENST00000225964 SPON2Q9BUD6 331 aa14.13□□□□□ -0.15
COL1A1-201ENST00000225964 KIAA1586Q9HCI6 787 aa14.13□□□□□ -0.15
COL1A1-201ENST00000225964 FGFR1OP2Q9NVK5 253 aa14.13□□□□□ -0.15
COL1A1-201ENST00000225964 PYCARDQ9ULZ3 195 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms