RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 CCT8L2Q96SF2 557 aa15.88■□□□□ 0.13
SCARB2-221ENST00000640341 TDRD3Q9H7E2 651 aaKnown RBP15.88■□□□□ 0.13
SCARB2-221ENST00000640341 TAS2R14Q9NYV8 317 aa15.88■□□□□ 0.13
SCARB2-221ENST00000640341 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.88■□□□□ 0.13
SCARB2-221ENST00000640341 ABCB5Q2M3G0 1257 aa15.88■□□□□ 0.13
SCARB2-221ENST00000640341 SLC35G2Q8TBE7 412 aa15.88■□□□□ 0.13
SCARB2-221ENST00000640341 ELMO3Q96BJ8 720 aa15.88■□□□□ 0.13
SCARB2-221ENST00000640341 HOOK2Q96ED9 719 aa15.88■□□□□ 0.13
SCARB2-221ENST00000640341 AMFRQ9UKV5 643 aa15.88■□□□□ 0.13
SCARB2-221ENST00000640341 ODR4Q5SWX8 454 aa15.88■□□□□ 0.13
SCARB2-221ENST00000640341 PALB2Q86YC2 1186 aa15.88■□□□□ 0.13
SCARB2-221ENST00000640341 FAM178BQ8IXR5 827 aa15.88■□□□□ 0.13
SCARB2-221ENST00000640341 NAP1L4Q99733 375 aaKnown RBP15.88■□□□□ 0.13
SCARB2-221ENST00000640341 CCDC113Q9H0I3 377 aa15.88■□□□□ 0.13
SCARB2-221ENST00000640341 ISCUQ9H1K1 167 aa15.88■□□□□ 0.13
SCARB2-221ENST00000640341 PPP1R9AQ9ULJ8 1098 aa15.88■□□□□ 0.13
SCARB2-221ENST00000640341 MYH7BA7E2Y1 1941 aa15.87■□□□□ 0.13
SCARB2-221ENST00000640341 TISP43B9A030 160 aa15.87■□□□□ 0.13
SCARB2-221ENST00000640341 PDXKO00764 312 aa15.87■□□□□ 0.13
SCARB2-221ENST00000640341 EXOC3O60645 756 aa15.87■□□□□ 0.13
SCARB2-221ENST00000640341 MDH1P40925 334 aaKnown RBP15.87■□□□□ 0.13
SCARB2-221ENST00000640341 CBWD6Q4V339 395 aa15.87■□□□□ 0.13
SCARB2-221ENST00000640341 CBWD3Q5JTY5 395 aa15.87■□□□□ 0.13
SCARB2-221ENST00000640341 CBWD5Q5RIA9 395 aa15.87■□□□□ 0.13
SCARB2-221ENST00000640341 LRCH2Q5VUJ6 765 aa15.87■□□□□ 0.13
SCARB2-221ENST00000640341 RINT1Q6NUQ1 792 aa15.87■□□□□ 0.13
SCARB2-221ENST00000640341 ZNF473Q8WTR7 871 aaKnown RBP15.87■□□□□ 0.13
SCARB2-221ENST00000640341 LRRC4CQ9HCJ2 640 aa15.87■□□□□ 0.13
SCARB2-221ENST00000640341 TRAF3IP3Q9Y228 551 aa15.87■□□□□ 0.13
SCARB2-221ENST00000640341 UTP11Q9Y3A2 253 aaKnown RBP15.87■□□□□ 0.13
SCARB2-221ENST00000640341 BZW2Q9Y6E2 419 aaKnown RBP15.87■□□□□ 0.13
SCARB2-221ENST00000640341 PITPNM2Q9BZ72 1349 aa15.87■□□□□ 0.13
SCARB2-221ENST00000640341 RREB1Q92766 1687 aa15.87■□□□□ 0.13
SCARB2-221ENST00000640341 ECE1P42892 770 aa15.87■□□□□ 0.13
SCARB2-221ENST00000640341 MARSP56192 900 aaKnown RBP15.87■□□□□ 0.13
SCARB2-221ENST00000640341 UAP1Q16222 522 aaPredicted RBP15.87■□□□□ 0.13
SCARB2-221ENST00000640341 SYDE2Q5VT97 1194 aa15.87■□□□□ 0.13
SCARB2-221ENST00000640341 NLRP14Q86W24 1093 aa15.87■□□□□ 0.13
SCARB2-221ENST00000640341 LRRC57Q8N9N7 239 aa15.87■□□□□ 0.13
SCARB2-221ENST00000640341 LENG9Q96B70 501 aa15.87■□□□□ 0.13
SCARB2-221ENST00000640341 PBKQ96KB5 322 aa15.87■□□□□ 0.13
SCARB2-221ENST00000640341 CCDC17Q96LX7 622 aa15.87■□□□□ 0.13
SCARB2-221ENST00000640341 IGSF9BQ9UPX0 1349 aa15.87■□□□□ 0.13
SCARB2-221ENST00000640341 TGFB1I1O43294 461 aa15.87■□□□□ 0.13
SCARB2-221ENST00000640341 TRIM37O94972 964 aa15.87■□□□□ 0.13
SCARB2-221ENST00000640341 TNFAIP3P21580 790 aa15.87■□□□□ 0.13
SCARB2-221ENST00000640341 MAGOHP61326 146 aaKnown RBP15.87■□□□□ 0.13
SCARB2-221ENST00000640341 HS2ST1Q7LGA3 356 aa15.87■□□□□ 0.13
SCARB2-221ENST00000640341 LNX1Q8TBB1 728 aaPredicted RBP15.87■□□□□ 0.13
SCARB2-221ENST00000640341 CERKQ8TCT0 537 aa15.87■□□□□ 0.13
SCARB2-221ENST00000640341 LMBR1Q8WVP7 490 aa15.87■□□□□ 0.13
SCARB2-221ENST00000640341 RUBCNQ92622 972 aa15.87■□□□□ 0.13
SCARB2-221ENST00000640341 MAGOHBQ96A72 148 aaKnown RBP15.87■□□□□ 0.13
SCARB2-221ENST00000640341 EPN3Q9H201 632 aa15.87■□□□□ 0.13
SCARB2-221ENST00000640341 PI4KBQ9UBF8 816 aa15.87■□□□□ 0.13
SCARB2-221ENST00000640341 COL5A3P25940 1745 aaPredicted RBP15.86■□□□□ 0.13
SCARB2-221ENST00000640341 PLTPP55058 493 aa15.86■□□□□ 0.13
SCARB2-221ENST00000640341 SKOR1P84550 965 aa15.86■□□□□ 0.13
SCARB2-221ENST00000640341 PTGISQ16647 500 aa15.86■□□□□ 0.13
SCARB2-221ENST00000640341 KDM7AQ6ZMT4 941 aa15.86■□□□□ 0.13
SCARB2-221ENST00000640341 B4GALNT4Q76KP1 1039 aa15.86■□□□□ 0.13
SCARB2-221ENST00000640341 BANK1Q8NDB2 785 aa15.86■□□□□ 0.13
SCARB2-221ENST00000640341 MDM1Q8TC05 714 aa15.86■□□□□ 0.13
SCARB2-221ENST00000640341 LRRC45Q96CN5 670 aa15.86■□□□□ 0.13
SCARB2-221ENST00000640341 THAP2Q9H0W7 228 aa15.86■□□□□ 0.13
SCARB2-221ENST00000640341 FRMD4BQ9Y2L6 1034 aa15.86■□□□□ 0.13
SCARB2-221ENST00000640341 BMP3P12645 472 aa15.86■□□□□ 0.13
SCARB2-221ENST00000640341 TNFRSF8P28908 595 aa15.86■□□□□ 0.13
SCARB2-221ENST00000640341 PSMC2P35998 433 aaKnown RBP15.86■□□□□ 0.13
SCARB2-221ENST00000640341 JAG1P78504 1218 aa15.86■□□□□ 0.13
SCARB2-221ENST00000640341 ICE2Q659A1 982 aa15.86■□□□□ 0.13
SCARB2-221ENST00000640341 CCDC26Q8TAB7 109 aa15.86■□□□□ 0.13
SCARB2-221ENST00000640341 ARHGEF26Q96DR7 871 aa15.86■□□□□ 0.13
SCARB2-221ENST00000640341 METTL14Q9HCE5 456 aaKnown RBP15.86■□□□□ 0.13
SCARB2-221ENST00000640341 SIX2Q9NPC8 291 aa15.86■□□□□ 0.13
SCARB2-221ENST00000640341 SNX24Q9Y343 169 aa15.86■□□□□ 0.13
SCARB2-221ENST00000640341 MAST2Q6P0Q8 1798 aa15.86■□□□□ 0.13
SCARB2-221ENST00000640341 RGL2O15211 777 aa15.85■□□□□ 0.13
SCARB2-221ENST00000640341 ZNF844Q08AG5 666 aa15.85■□□□□ 0.13
SCARB2-221ENST00000640341 AP3B2Q13367 1082 aa15.85■□□□□ 0.13
SCARB2-221ENST00000640341 SIAH1Q8IUQ4 282 aa15.85■□□□□ 0.13
SCARB2-221ENST00000640341 SP8Q8IXZ3 490 aa15.85■□□□□ 0.13
SCARB2-221ENST00000640341 MYCBPAPQ8TBZ2 947 aa15.85■□□□□ 0.13
SCARB2-221ENST00000640341 ACP6Q9NPH0 428 aa15.85■□□□□ 0.13
SCARB2-221ENST00000640341 PLCB1Q9NQ66 1216 aa15.85■□□□□ 0.13
SCARB2-221ENST00000640341 PLIN4Q96Q06 1357 aa15.85■□□□□ 0.13
SCARB2-221ENST00000640341 HMGB1P1B2RPK0 211 aaPredicted RBP15.85■□□□□ 0.13
SCARB2-221ENST00000640341 ATMINO43313 823 aaPredicted RBP15.85■□□□□ 0.13
SCARB2-221ENST00000640341 GAS7O60861 476 aa15.85■□□□□ 0.13
SCARB2-221ENST00000640341 CLSTN1O94985 981 aa15.85■□□□□ 0.13
SCARB2-221ENST00000640341 ITGB3BPQ13352 177 aaPredicted RBP15.85■□□□□ 0.13
SCARB2-221ENST00000640341 SH3BP5LQ7L8J4 393 aa15.85■□□□□ 0.13
SCARB2-221ENST00000640341 NT5DC3Q86UY8 548 aa15.85■□□□□ 0.13
SCARB2-221ENST00000640341 SCFD2Q8WU76 684 aa15.85■□□□□ 0.13
SCARB2-221ENST00000640341 GLT8D2Q9H1C3 349 aa15.85■□□□□ 0.13
SCARB2-221ENST00000640341 CTTNBP2NLQ9P2B4 639 aa15.85■□□□□ 0.13
SCARB2-221ENST00000640341 PTPN22Q9Y2R2 807 aa15.85■□□□□ 0.13
SCARB2-221ENST00000640341 FRMD3A2A2Y4 597 aa15.85■□□□□ 0.13
SCARB2-221ENST00000640341 POLRMTO00411 1230 aaKnown RBP15.85■□□□□ 0.13
SCARB2-221ENST00000640341 ECHS1P30084 290 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms