RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 NAA35Q5VZE5 725 aa10.52□□□□□ -0.72
CLTCL1-211ENST00000621271 MB21D1Q8N884 522 aa10.52□□□□□ -0.72
CLTCL1-211ENST00000621271 ALKBH8Q96BT7 664 aaKnown RBP10.52□□□□□ -0.72
CLTCL1-211ENST00000621271 ZNF668Q96K58 619 aaPredicted RBP10.52□□□□□ -0.72
CLTCL1-211ENST00000621271 ZNF560Q96MR9 790 aa10.52□□□□□ -0.72
CLTCL1-211ENST00000621271 GLT1D1Q96MS3 346 aa10.52□□□□□ -0.72
CLTCL1-211ENST00000621271 SLC9A2Q9UBY0 812 aa10.52□□□□□ -0.72
CLTCL1-211ENST00000621271 PIN4Q9Y237 131 aaKnown RBP10.52□□□□□ -0.72
CLTCL1-211ENST00000621271 CPSF1Q10570 1443 aaKnown RBP10.52□□□□□ -0.72
CLTCL1-211ENST00000621271 DCCP43146 1447 aa10.52□□□□□ -0.73
CLTCL1-211ENST00000621271 TTC36A6NLP5 189 aa10.52□□□□□ -0.73
CLTCL1-211ENST00000621271 CYBBP04839 570 aa10.52□□□□□ -0.73
CLTCL1-211ENST00000621271 COG7P83436 770 aa10.52□□□□□ -0.73
CLTCL1-211ENST00000621271 EHHADHQ08426 723 aa10.52□□□□□ -0.73
CLTCL1-211ENST00000621271 ZNF394Q53GI3 561 aa10.52□□□□□ -0.73
CLTCL1-211ENST00000621271 C9orf131Q5VYM1 1079 aa10.52□□□□□ -0.73
CLTCL1-211ENST00000621271 RASEFQ8IZ41 740 aa10.52□□□□□ -0.73
CLTCL1-211ENST00000621271 FAM84BQ96KN1 310 aaPredicted RBP10.52□□□□□ -0.73
CLTCL1-211ENST00000621271 IPO5O00410 1097 aaKnown RBP10.52□□□□□ -0.73
CLTCL1-211ENST00000621271 RALAP11233 206 aa10.52□□□□□ -0.73
CLTCL1-211ENST00000621271 GUCY2FP51841 1108 aa10.52□□□□□ -0.73
CLTCL1-211ENST00000621271 BASP1P80723 227 aaKnown RBP10.52□□□□□ -0.73
CLTCL1-211ENST00000621271 KYAT1Q16773 422 aa10.52□□□□□ -0.73
CLTCL1-211ENST00000621271 TTC23LQ6PF05 361 aa10.52□□□□□ -0.73
CLTCL1-211ENST00000621271 SPATS2Q86XZ4 545 aaKnown RBP10.52□□□□□ -0.73
CLTCL1-211ENST00000621271 TTC39CQ8N584 583 aa10.52□□□□□ -0.73
CLTCL1-211ENST00000621271 DPF3Q92784 378 aa10.52□□□□□ -0.73
CLTCL1-211ENST00000621271 MAGOHBQ96A72 148 aaKnown RBP10.52□□□□□ -0.73
CLTCL1-211ENST00000621271 ISCA1Q9BUE6 129 aa10.52□□□□□ -0.73
CLTCL1-211ENST00000621271 MTFR1LQ9H019 292 aa10.52□□□□□ -0.73
CLTCL1-211ENST00000621271 EFCC1Q9HA90 598 aa10.52□□□□□ -0.73
CLTCL1-211ENST00000621271 ZNF70Q9UC06 446 aaPredicted RBP10.52□□□□□ -0.73
CLTCL1-211ENST00000621271 PSMD14O00487 310 aa10.52□□□□□ -0.73
CLTCL1-211ENST00000621271 CASQ2O14958 399 aaPredicted RBP10.52□□□□□ -0.73
CLTCL1-211ENST00000621271 SLC25A27O95847 323 aa10.52□□□□□ -0.73
CLTCL1-211ENST00000621271 GH1P01241 217 aa10.52□□□□□ -0.73
CLTCL1-211ENST00000621271 APOEP02649 317 aa10.52□□□□□ -0.73
CLTCL1-211ENST00000621271 IGKV5-2P06315 115 aa10.52□□□□□ -0.73
CLTCL1-211ENST00000621271 STAT5BP51692 787 aa10.52□□□□□ -0.73
CLTCL1-211ENST00000621271 CYP27A1Q02318 531 aa10.52□□□□□ -0.73
CLTCL1-211ENST00000621271 STAP1Q9ULZ2 295 aa10.52□□□□□ -0.73
CLTCL1-211ENST00000621271 SCINQ9Y6U3 715 aa10.52□□□□□ -0.73
CLTCL1-211ENST00000621271 BUB1BO60566 1050 aaPredicted RBP10.51□□□□□ -0.73
CLTCL1-211ENST00000621271 ENTPD3O75355 529 aa10.51□□□□□ -0.73
CLTCL1-211ENST00000621271 TADA2AO75478 443 aa10.51□□□□□ -0.73
CLTCL1-211ENST00000621271 ZBED1O96006 694 aa10.51□□□□□ -0.73
CLTCL1-211ENST00000621271 ALDH1A1P00352 501 aa10.51□□□□□ -0.73
CLTCL1-211ENST00000621271 CA4P22748 312 aa10.51□□□□□ -0.73
CLTCL1-211ENST00000621271 STX1BP61266 288 aa10.51□□□□□ -0.73
CLTCL1-211ENST00000621271 POLR3FQ9H1D9 316 aaPredicted RBP10.51□□□□□ -0.73
CLTCL1-211ENST00000621271 FAM114A2Q9NRY5 505 aa10.51□□□□□ -0.73
CLTCL1-211ENST00000621271 PTPN22Q9Y2R2 807 aa10.51□□□□□ -0.73
CLTCL1-211ENST00000621271 PCDHA10Q9Y5I2 948 aa10.51□□□□□ -0.73
CLTCL1-211ENST00000621271 SLC16A4O15374 487 aa10.51□□□□□ -0.73
CLTCL1-211ENST00000621271 SGO2Q562F6 1265 aa10.51□□□□□ -0.73
CLTCL1-211ENST00000621271 XXYLT1Q8NBI6 393 aa10.51□□□□□ -0.73
CLTCL1-211ENST00000621271 DHX38Q92620 1227 aaKnown RBP10.51□□□□□ -0.73
CLTCL1-211ENST00000621271 ASIC4Q96FT7 647 aa10.51□□□□□ -0.73
CLTCL1-211ENST00000621271 DYDC2Q96IM9 177 aa10.51□□□□□ -0.73
CLTCL1-211ENST00000621271 HAUS8Q9BT25 410 aa10.51□□□□□ -0.73
CLTCL1-211ENST00000621271 PDE11AQ9HCR9 933 aa10.51□□□□□ -0.73
CLTCL1-211ENST00000621271 MYOZ2Q9NPC6 264 aa10.51□□□□□ -0.73
CLTCL1-211ENST00000621271 EPN1Q9Y6I3 576 aaPredicted RBP10.51□□□□□ -0.73
CLTCL1-211ENST00000621271 NVLO15381 856 aaKnown RBP10.51□□□□□ -0.73
CLTCL1-211ENST00000621271 COBLO75128 1261 aa10.51□□□□□ -0.73
CLTCL1-211ENST00000621271 PSMA2P25787 234 aa10.51□□□□□ -0.73
CLTCL1-211ENST00000621271 GTF2A2P52657 109 aa10.51□□□□□ -0.73
CLTCL1-211ENST00000621271 MMEL1Q495T6 779 aa10.51□□□□□ -0.73
CLTCL1-211ENST00000621271 PPP6R3Q5H9R7 873 aaPredicted RBP10.51□□□□□ -0.73
CLTCL1-211ENST00000621271 TMEM35BQ8NCS4 154 aa10.51□□□□□ -0.73
CLTCL1-211ENST00000621271 MYCBPQ99417 103 aaPredicted RBP10.51□□□□□ -0.73
CLTCL1-211ENST00000621271 FAM213AQ9BRX8 229 aa10.51□□□□□ -0.73
CLTCL1-211ENST00000621271 CPVLQ9H3G5 476 aa10.51□□□□□ -0.73
CLTCL1-211ENST00000621271 GOLGA8KD6RF30 607 aa10.51□□□□□ -0.73
CLTCL1-211ENST00000621271 ZNF853P0CG23 659 aa10.51□□□□□ -0.73
CLTCL1-211ENST00000621271 CCNE1P24864 410 aa10.51□□□□□ -0.73
CLTCL1-211ENST00000621271 CASP2P42575 452 aa10.51□□□□□ -0.73
CLTCL1-211ENST00000621271 GNGT1P63211 74 aa10.51□□□□□ -0.73
CLTCL1-211ENST00000621271 CLEC17AQ6ZS10 378 aa10.51□□□□□ -0.73
CLTCL1-211ENST00000621271 SMIM5Q71RC9 77 aa10.51□□□□□ -0.73
CLTCL1-211ENST00000621271 PHLDB2Q86SQ0 1253 aa10.51□□□□□ -0.73
CLTCL1-211ENST00000621271 TADA2BQ86TJ2 420 aa10.51□□□□□ -0.73
CLTCL1-211ENST00000621271 VPS39Q96JC1 886 aa10.51□□□□□ -0.73
CLTCL1-211ENST00000621271 GDAP1L1Q96MZ0 367 aa10.51□□□□□ -0.73
CLTCL1-211ENST00000621271 DDX50Q9BQ39 737 aaKnown RBP10.51□□□□□ -0.73
CLTCL1-211ENST00000621271 SYNDIG1Q9H7V2 258 aa10.51□□□□□ -0.73
CLTCL1-211ENST00000621271 JPH1Q9HDC5 661 aaPredicted RBP10.51□□□□□ -0.73
CLTCL1-211ENST00000621271 PPARDQ03181 441 aa10.5□□□□□ -0.73
CLTCL1-211ENST00000621271 MAP3K21Q5TCX8 1036 aa10.5□□□□□ -0.73
CLTCL1-211ENST00000621271 PRAMEF18Q5VWM3 479 aa10.5□□□□□ -0.73
CLTCL1-211ENST00000621271 MARCH10Q8NA82 808 aaPredicted RBP10.5□□□□□ -0.73
CLTCL1-211ENST00000621271 IFT43Q96FT9 208 aa10.5□□□□□ -0.73
CLTCL1-211ENST00000621271 TRIM62Q9BVG3 475 aa10.5□□□□□ -0.73
CLTCL1-211ENST00000621271 RRP15Q9Y3B9 282 aaKnown RBP10.5□□□□□ -0.73
CLTCL1-211ENST00000621271 GGPS1O95749 300 aa10.5□□□□□ -0.73
CLTCL1-211ENST00000621271 ST8SIA6P61647 398 aa10.5□□□□□ -0.73
CLTCL1-211ENST00000621271 LRRC63Q05C16 580 aa10.5□□□□□ -0.73
CLTCL1-211ENST00000621271 SLC12A1Q13621 1099 aa10.5□□□□□ -0.73
CLTCL1-211ENST00000621271 GNASQ5JWF2 1037 aa10.5□□□□□ -0.73
CLTCL1-211ENST00000621271 SMYD4Q8IYR2 804 aaPredicted RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms