RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 RDM1Q8NG50 284 aa19.34■□□□□ 0.69
HMGN3-203ENST00000620514 ADAMTS19Q8TE59 1207 aa19.34■□□□□ 0.69
HMGN3-203ENST00000620514 ST3GAL5Q9UNP4 418 aa19.34■□□□□ 0.69
HMGN3-203ENST00000620514 COG5Q9UP83 839 aa19.34■□□□□ 0.69
HMGN3-203ENST00000620514 JAK2O60674 1132 aa19.33■□□□□ 0.68
HMGN3-203ENST00000620514 BMP1P13497 986 aa19.33■□□□□ 0.68
HMGN3-203ENST00000620514 GATMP50440 423 aa19.33■□□□□ 0.68
HMGN3-203ENST00000620514 FOSBP53539 338 aa19.33■□□□□ 0.68
HMGN3-203ENST00000620514 NR5A1Q13285 461 aa19.33■□□□□ 0.68
HMGN3-203ENST00000620514 TARBP2Q15633 366 aaKnown RBP19.33■□□□□ 0.68
HMGN3-203ENST00000620514 WASF1Q92558 559 aa19.33■□□□□ 0.68
HMGN3-203ENST00000620514 HLA-CQ95604 372 aa19.33■□□□□ 0.68
HMGN3-203ENST00000620514 MRPL38Q96DV4 380 aaKnown RBP19.33■□□□□ 0.68
HMGN3-203ENST00000620514 ZNF668Q96K58 619 aaPredicted RBP19.33■□□□□ 0.68
HMGN3-203ENST00000620514 SH2D3AQ9BRG2 576 aa19.33■□□□□ 0.68
HMGN3-203ENST00000620514 AKT3Q9Y243 479 aa19.33■□□□□ 0.68
HMGN3-203ENST00000620514 EML1O00423 815 aa19.32■□□□□ 0.68
HMGN3-203ENST00000620514 EIF5BO60841 1220 aaKnown RBP19.32■□□□□ 0.68
HMGN3-203ENST00000620514 BMPR1AP36894 532 aa19.32■□□□□ 0.68
HMGN3-203ENST00000620514 NLRP11P59045 1033 aaKnown RBP19.32■□□□□ 0.68
HMGN3-203ENST00000620514 MTERF2Q49AM1 385 aa19.32■□□□□ 0.68
HMGN3-203ENST00000620514 PAN2Q504Q3 1202 aaKnown RBP19.32■□□□□ 0.68
HMGN3-203ENST00000620514 PPP4R3AQ6IN85 833 aa19.32■□□□□ 0.68
HMGN3-203ENST00000620514 BANK1Q8NDB2 785 aa19.32■□□□□ 0.68
HMGN3-203ENST00000620514 IL27Q8NEV9 243 aa19.32■□□□□ 0.68
HMGN3-203ENST00000620514 CLP1Q92989 425 aaKnown RBP19.32■□□□□ 0.68
HMGN3-203ENST00000620514 NECAB3Q96P71 396 aaPredicted RBP19.32■□□□□ 0.68
HMGN3-203ENST00000620514 MAP7D2Q96T17 732 aa19.32■□□□□ 0.68
HMGN3-203ENST00000620514 ADAM2Q99965 735 aa19.32■□□□□ 0.68
HMGN3-203ENST00000620514 ADAMTS10Q9H324 1103 aa19.32■□□□□ 0.68
HMGN3-203ENST00000620514 KCNMB3Q9NPA1 279 aa19.32■□□□□ 0.68
HMGN3-203ENST00000620514 SEPT9Q9UHD8 586 aaPredicted RBP19.32■□□□□ 0.68
HMGN3-203ENST00000620514 VAV3Q9UKW4 847 aa19.32■□□□□ 0.68
HMGN3-203ENST00000620514 MRPL42Q9Y6G3 142 aaKnown RBP19.32■□□□□ 0.68
HMGN3-203ENST00000620514 RALGAPA2Q2PPJ7 1873 aa19.32■□□□□ 0.68
HMGN3-203ENST00000620514 TCF20Q9UGU0 1960 aaKnown RBP19.32■□□□□ 0.68
HMGN3-203ENST00000620514 C5orf67F2Z3F1 127 aa19.31■□□□□ 0.68
HMGN3-203ENST00000620514 GPR182O15218 404 aa19.31■□□□□ 0.68
HMGN3-203ENST00000620514 CCNT1O60563 726 aaKnown RBP19.31■□□□□ 0.68
HMGN3-203ENST00000620514 STAG3L1P0CL83 205 aa19.31■□□□□ 0.68
HMGN3-203ENST00000620514 TMOD1P28289 359 aa19.31■□□□□ 0.68
HMGN3-203ENST00000620514 KRT2P35908 639 aa19.31■□□□□ 0.68
HMGN3-203ENST00000620514 SARSP49591 514 aaKnown RBP19.31■□□□□ 0.68
HMGN3-203ENST00000620514 DRP2Q13474 957 aa19.31■□□□□ 0.68
HMGN3-203ENST00000620514 PTPROQ16827 1216 aa19.31■□□□□ 0.68
HMGN3-203ENST00000620514 AAK1Q2M2I8 961 aa19.31■□□□□ 0.68
HMGN3-203ENST00000620514 XKR3Q5GH77 459 aa19.31■□□□□ 0.68
HMGN3-203ENST00000620514 HAS1Q92839 578 aa19.31■□□□□ 0.68
HMGN3-203ENST00000620514 TNFRSF25Q93038 417 aa19.31■□□□□ 0.68
HMGN3-203ENST00000620514 CEP89Q96ST8 783 aa19.31■□□□□ 0.68
HMGN3-203ENST00000620514 UHRF1Q96T88 793 aaPredicted RBP19.31■□□□□ 0.68
HMGN3-203ENST00000620514 NIFKQ9BYG3 293 aaKnown RBP19.31■□□□□ 0.68
HMGN3-203ENST00000620514 RGS18Q9NS28 235 aa19.31■□□□□ 0.68
HMGN3-203ENST00000620514 LRFN2Q9ULH4 789 aa19.31■□□□□ 0.68
HMGN3-203ENST00000620514 DENND3A2RUS2 1198 aa19.3■□□□□ 0.68
HMGN3-203ENST00000620514 GRM6O15303 877 aa19.3■□□□□ 0.68
HMGN3-203ENST00000620514 GCFC2P16383 781 aaKnown RBP19.3■□□□□ 0.68
HMGN3-203ENST00000620514 TBC1D8BQ0IIM8 1120 aa19.3■□□□□ 0.68
HMGN3-203ENST00000620514 POTEDQ86YR6 584 aa19.3■□□□□ 0.68
HMGN3-203ENST00000620514 CMTR2Q8IYT2 770 aaKnown RBP19.3■□□□□ 0.68
HMGN3-203ENST00000620514 FAM20AQ96MK3 541 aa19.3■□□□□ 0.68
HMGN3-203ENST00000620514 DDX11L8A8MPP1 907 aa19.29■□□□□ 0.68
HMGN3-203ENST00000620514 C9IYK1 514 aa19.29■□□□□ 0.68
HMGN3-203ENST00000620514 TNFRSF10AO00220 468 aa19.29■□□□□ 0.68
HMGN3-203ENST00000620514 RB1P06400 928 aa19.29■□□□□ 0.68
HMGN3-203ENST00000620514 GPC3P51654 580 aa19.29■□□□□ 0.68
HMGN3-203ENST00000620514 PSMC5P62195 406 aa19.29■□□□□ 0.68
HMGN3-203ENST00000620514 PPP2R5CQ13362 524 aa19.29■□□□□ 0.68
HMGN3-203ENST00000620514 DSC3Q14574 896 aa19.29■□□□□ 0.68
HMGN3-203ENST00000620514 TCEAL5Q5H9L2 206 aa19.29■□□□□ 0.68
HMGN3-203ENST00000620514 ODR4Q5SWX8 454 aa19.29■□□□□ 0.68
HMGN3-203ENST00000620514 PLA2G4FQ68DD2 849 aa19.29■□□□□ 0.68
HMGN3-203ENST00000620514 C11orf84Q9BUA3 381 aaPredicted RBP19.29■□□□□ 0.68
HMGN3-203ENST00000620514 UBE2ZQ9H832 354 aaPredicted RBP19.29■□□□□ 0.68
HMGN3-203ENST00000620514 C1orf112Q9NSG2 853 aa19.29■□□□□ 0.68
HMGN3-203ENST00000620514 RWDD3Q9Y3V2 267 aa19.29■□□□□ 0.68
HMGN3-203ENST00000620514 PCDHB7Q9Y5E2 793 aa19.29■□□□□ 0.68
HMGN3-203ENST00000620514 BRWD1Q9NSI6 2320 aa19.29■□□□□ 0.68
HMGN3-203ENST00000620514 XIRP2A4UGR9 3374 aa19.29■□□□□ 0.68
HMGN3-203ENST00000620514 BTBD18B2RXH4 712 aa19.28■□□□□ 0.68
HMGN3-203ENST00000620514 CSPG5O95196 566 aa19.28■□□□□ 0.68
HMGN3-203ENST00000620514 FGFR4P22455 802 aa19.28■□□□□ 0.68
HMGN3-203ENST00000620514 C8orf34Q49A92 452 aa19.28■□□□□ 0.68
HMGN3-203ENST00000620514 TIGD5Q53EQ6 642 aa19.28■□□□□ 0.68
HMGN3-203ENST00000620514 SLC24A5Q71RS6 500 aa19.28■□□□□ 0.68
HMGN3-203ENST00000620514 ANO5Q75V66 913 aa19.28■□□□□ 0.68
HMGN3-203ENST00000620514 BRMS1Q9HCU9 246 aa19.28■□□□□ 0.68
HMGN3-203ENST00000620514 WRAP73Q9P2S5 460 aaPredicted RBP19.28■□□□□ 0.68
HMGN3-203ENST00000620514 KIAA1671Q9BY89 1806 aa19.28■□□□□ 0.68
HMGN3-203ENST00000620514 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.27■□□□□ 0.68
HMGN3-203ENST00000620514 IGKV6-21A0A0C4DH24 114 aa19.27■□□□□ 0.68
HMGN3-203ENST00000620514 WNT7AO00755 349 aa19.27■□□□□ 0.68
HMGN3-203ENST00000620514 TBX3O15119 743 aa19.27■□□□□ 0.68
HMGN3-203ENST00000620514 MARCH6O60337 910 aa19.27■□□□□ 0.68
HMGN3-203ENST00000620514 MMP1P03956 469 aa19.27■□□□□ 0.68
HMGN3-203ENST00000620514 DARSP14868 501 aaKnown RBP19.27■□□□□ 0.68
HMGN3-203ENST00000620514 EIF4BP23588 611 aaKnown RBP19.27■□□□□ 0.68
HMGN3-203ENST00000620514 FAM102BQ5T8I3 360 aa19.27■□□□□ 0.68
HMGN3-203ENST00000620514 DIS3L2Q8IYB7 885 aaKnown RBP19.27■□□□□ 0.68
HMGN3-203ENST00000620514 NLRP7Q8WX94 980 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms