RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 PCSK9Q8NBP7 692 aaKnown RBP20.59■□□□□ 0.89
SSBP4-212ENST00000601919 KIFAP3Q92845 792 aa20.59■□□□□ 0.89
SSBP4-212ENST00000601919 C17orf75Q9HAS0 396 aa20.59■□□□□ 0.89
SSBP4-212ENST00000601919 HIP1RO75146 1068 aa20.58■□□□□ 0.89
SSBP4-212ENST00000601919 KIF20AO95235 890 aa20.58■□□□□ 0.89
SSBP4-212ENST00000601919 HSPA1AP0DMV8 641 aaKnown RBP20.58■□□□□ 0.89
SSBP4-212ENST00000601919 HSPA1BP0DMV9 641 aaKnown RBP20.58■□□□□ 0.89
SSBP4-212ENST00000601919 CST5P28325 142 aaPredicted RBP20.58■□□□□ 0.89
SSBP4-212ENST00000601919 ZNF131P52739 623 aa20.58■□□□□ 0.89
SSBP4-212ENST00000601919 BEX3Q00994 111 aa20.58■□□□□ 0.89
SSBP4-212ENST00000601919 EMC2Q15006 297 aa20.58■□□□□ 0.89
SSBP4-212ENST00000601919 DPCR1Q3MIW9 517 aa20.58■□□□□ 0.89
SSBP4-212ENST00000601919 FAM26FQ5R3K3 315 aa20.58■□□□□ 0.89
SSBP4-212ENST00000601919 RNF180Q86T96 592 aa20.58■□□□□ 0.89
SSBP4-212ENST00000601919 SLC17A8Q8NDX2 589 aa20.58■□□□□ 0.89
SSBP4-212ENST00000601919 SH2D3AQ9BRG2 576 aa20.58■□□□□ 0.89
SSBP4-212ENST00000601919 MTG1Q9BT17 334 aaPredicted RBP20.58■□□□□ 0.89
SSBP4-212ENST00000601919 RNPEPQ9H4A4 650 aa20.58■□□□□ 0.89
SSBP4-212ENST00000601919 DHX33Q9H6R0 707 aaKnown RBP20.58■□□□□ 0.89
SSBP4-212ENST00000601919 LARSQ9P2J5 1176 aaKnown RBP20.58■□□□□ 0.89
SSBP4-212ENST00000601919 RRN3P2A6NIE6 340 aa20.57■□□□□ 0.88
SSBP4-212ENST00000601919 MAGEB2O15479 319 aa20.57■□□□□ 0.88
SSBP4-212ENST00000601919 ADAMTS4O75173 837 aa20.57■□□□□ 0.88
SSBP4-212ENST00000601919 PGK1P00558 417 aa20.57■□□□□ 0.88
SSBP4-212ENST00000601919 RTP1P59025 263 aa20.57■□□□□ 0.88
SSBP4-212ENST00000601919 CACNB1Q02641 598 aaPredicted RBP20.57■□□□□ 0.88
SSBP4-212ENST00000601919 EHHADHQ08426 723 aa20.57■□□□□ 0.88
SSBP4-212ENST00000601919 MFSD10Q14728 455 aa20.57■□□□□ 0.88
SSBP4-212ENST00000601919 FAM102BQ5T8I3 360 aa20.57■□□□□ 0.88
SSBP4-212ENST00000601919 STXBP4Q6ZWJ1 553 aa20.57■□□□□ 0.88
SSBP4-212ENST00000601919 MYCT1Q8N699 235 aa20.57■□□□□ 0.88
SSBP4-212ENST00000601919 TCP11Q8WWU5 503 aa20.57■□□□□ 0.88
SSBP4-212ENST00000601919 DNAJC25Q9H1X3 360 aa20.57■□□□□ 0.88
SSBP4-212ENST00000601919 MAFO75444 373 aaPredicted RBP20.56■□□□□ 0.88
SSBP4-212ENST00000601919 INSRRP14616 1297 aa20.56■□□□□ 0.88
SSBP4-212ENST00000601919 BMP6P22004 513 aa20.56■□□□□ 0.88
SSBP4-212ENST00000601919 PSEN2P49810 448 aa20.56■□□□□ 0.88
SSBP4-212ENST00000601919 ZNF165P49910 485 aa20.56■□□□□ 0.88
SSBP4-212ENST00000601919 LBX1P52954 281 aa20.56■□□□□ 0.88
SSBP4-212ENST00000601919 PURAQ00577 322 aaKnown RBP20.56■□□□□ 0.88
SSBP4-212ENST00000601919 PPFIA1Q13136 1202 aa20.56■□□□□ 0.88
SSBP4-212ENST00000601919 COBLL1Q53SF7 1204 aa20.56■□□□□ 0.88
SSBP4-212ENST00000601919 MAEAQ7L5Y9 396 aa20.56■□□□□ 0.88
SSBP4-212ENST00000601919 SFR1Q86XK3 245 aa20.56■□□□□ 0.88
SSBP4-212ENST00000601919 RETREG2Q8NC44 543 aa20.56■□□□□ 0.88
SSBP4-212ENST00000601919 KLHDC9Q8NEP7 349 aa20.56■□□□□ 0.88
SSBP4-212ENST00000601919 SH3TC2Q8TF17 1288 aa20.56■□□□□ 0.88
SSBP4-212ENST00000601919 CEP89Q96ST8 783 aa20.56■□□□□ 0.88
SSBP4-212ENST00000601919 BPIFA3Q9BQP9 254 aa20.56■□□□□ 0.88
SSBP4-212ENST00000601919 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.56■□□□□ 0.882e-7■■□□□ 13.5
SSBP4-212ENST00000601919 PDLIM7Q9NR12 457 aa20.56■□□□□ 0.88
SSBP4-212ENST00000601919 OLFML3Q9NRN5 406 aa20.56■□□□□ 0.88
SSBP4-212ENST00000601919 RSPH10B2B2RC85 870 aa20.55■□□□□ 0.88
SSBP4-212ENST00000601919 RSPH10BP0C881 870 aa20.55■□□□□ 0.88
SSBP4-212ENST00000601919 MAPTP10636 758 aaKnown RBP20.55■□□□□ 0.88
SSBP4-212ENST00000601919 PLS3P13797 630 aa20.55■□□□□ 0.88
SSBP4-212ENST00000601919 DNM2P50570 870 aa20.55■□□□□ 0.88
SSBP4-212ENST00000601919 GSE1Q14687 1217 aa20.55■□□□□ 0.88
SSBP4-212ENST00000601919 PPP2R5AQ15172 486 aa20.55■□□□□ 0.88
SSBP4-212ENST00000601919 KIAA0753Q2KHM9 967 aa20.55■□□□□ 0.88
SSBP4-212ENST00000601919 ODR4Q5SWX8 454 aa20.55■□□□□ 0.88
SSBP4-212ENST00000601919 FBXO46Q6PJ61 603 aaPredicted RBP20.55■□□□□ 0.88
SSBP4-212ENST00000601919 FAM178BQ8IXR5 827 aa20.55■□□□□ 0.88
SSBP4-212ENST00000601919 ARRDC4Q8NCT1 418 aa20.55■□□□□ 0.88
SSBP4-212ENST00000601919 FAM200AQ8TCP9 573 aa20.55■□□□□ 0.88
SSBP4-212ENST00000601919 IFT74Q96LB3 600 aa20.55■□□□□ 0.88
SSBP4-212ENST00000601919 MRPL44Q9H9J2 332 aaKnown RBP20.55■□□□□ 0.88
SSBP4-212ENST00000601919 SLC39A2Q9NP94 309 aa20.55■□□□□ 0.88
SSBP4-212ENST00000601919 FRMPD3Q5JV73 1810 aa20.55■□□□□ 0.88
SSBP4-212ENST00000601919 NRCAMQ92823 1304 aa20.54■□□□□ 0.88
SSBP4-212ENST00000601919 MYADML2A6NDP7 307 aa20.54■□□□□ 0.88
SSBP4-212ENST00000601919 ZBTB42B2RXF5 422 aa20.54■□□□□ 0.88
SSBP4-212ENST00000601919 HAS3O00219 553 aa20.54■□□□□ 0.88
SSBP4-212ENST00000601919 PSMA7O14818 248 aa20.54■□□□□ 0.88
SSBP4-212ENST00000601919 CABYRO75952 493 aa20.54■□□□□ 0.88
SSBP4-212ENST00000601919 GNAT1P11488 350 aa20.54■□□□□ 0.88
SSBP4-212ENST00000601919 SCP2P22307 547 aa20.54■□□□□ 0.88
SSBP4-212ENST00000601919 ERCC5P28715 1186 aaPredicted RBP20.54■□□□□ 0.88
SSBP4-212ENST00000601919 ABCD1P33897 745 aa20.54■□□□□ 0.88
SSBP4-212ENST00000601919 SMTNP53814 917 aa20.54■□□□□ 0.88
SSBP4-212ENST00000601919 STK4Q13043 487 aa20.54■□□□□ 0.88
SSBP4-212ENST00000601919 MAPK7Q13164 816 aa20.54■□□□□ 0.88
SSBP4-212ENST00000601919 DMP1Q13316 513 aaPredicted RBP20.54■□□□□ 0.88
SSBP4-212ENST00000601919 ALCAMQ13740 583 aa20.54■□□□□ 0.88
SSBP4-212ENST00000601919 GRIK4Q16099 956 aa20.54■□□□□ 0.88
SSBP4-212ENST00000601919 IER5Q5VY09 327 aa20.54■□□□□ 0.88
SSBP4-212ENST00000601919 KAT2BQ92831 832 aa20.54■□□□□ 0.88
SSBP4-212ENST00000601919 DHTKD1Q96HY7 919 aaPredicted RBP20.54■□□□□ 0.88
SSBP4-212ENST00000601919 TSEN34Q9BSV6 310 aaKnown RBP20.54■□□□□ 0.88
SSBP4-212ENST00000601919 GDAQ9Y2T3 454 aa20.54■□□□□ 0.88
SSBP4-212ENST00000601919 GOLGA6L3A6NEY3 463 aa20.53■□□□□ 0.88
SSBP4-212ENST00000601919 SFI1A8K8P3 1242 aa20.53■□□□□ 0.88
SSBP4-212ENST00000601919 H0YCG3 227 aa20.53■□□□□ 0.88
SSBP4-212ENST00000601919 MYCNP04198 464 aaPredicted RBP20.53■□□□□ 0.88
SSBP4-212ENST00000601919 TMOD1P28289 359 aa20.53■□□□□ 0.88
SSBP4-212ENST00000601919 PRCPP42785 496 aa20.53■□□□□ 0.88
SSBP4-212ENST00000601919 CHMP4BP1P59074 171 aa20.53■□□□□ 0.88
SSBP4-212ENST00000601919 KCNA10Q16322 511 aa20.53■□□□□ 0.88
SSBP4-212ENST00000601919 C11orf57Q6ZUT1 292 aaPredicted RBP20.53■□□□□ 0.88
SSBP4-212ENST00000601919 MYOCDQ8IZQ8 938 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms